Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 123780121 | . | T | A | CCDS6826.1:NM_001735.2:c.1516Aag>Tag_NP_001726.2:p.506K>* | Homo sapiens complement C5 (C5), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3prx | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2011-01-19 | LYS | A:506 | A:506 | 50.0 | 0.25 | T | 40.4 | 79.1 | 50.0 | 0.25 | 0.0 | ||||||
LYS | C:506 | C:506 | 56.0 | 0.28 | T | 39.5 | 74.3 | NA | NA | NA | |||||||||||||
3pvm | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2011-01-19 | LYS | A:506 | A:506 | 15.0 | 0.075 | T | 42.6 | 35.9 | 15.0 | 0.075 | 0.0 | ||||||
LYS | C:506 | C:506 | 16.0 | 0.08 | T | 43.0 | 36.5 | NA | NA | NA | |||||||||||||
5i5k | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-16 | LYS | A:506 | B:506 | 40.0 | 0.2 | T | 58.6 | 26.8 | 40.0 | 0.2 | 0.0 | ||||||
LYS | D:506 | A:506 | 36.0 | 0.18 | T | 57.4 | 27.2 | NA | NA | NA | |||||||||||||
7ad6 | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2021-03-10 | LYS | A:506 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | B:506 | B:506 | 49.0 | 0.245 | T | 58.5 | 30.9 | 33.0 | 0.165 | 0.08 |
C:None:0.08 |
||||||||||||
7ad7 | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2021-03-10 | LYS | A:506 | B:506 | 49.0 | 0.245 | T | 58.1 | 36.0 | 49.0 | 0.245 | 0.0 |
HOH |
2.877 |
N |
O |
||
LYS | B:506 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3cu7 | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2008-06-10 | LYS | A:506 | A:506 | 45.0 | 0.225 | T | 53.3 | 41.7 | 45.0 | 0.225 | 0.0 | ||||||
LYS | B:506 | B:506 | 41.0 | 0.205 | T | 53.1 | 42.0 | NA | NA | NA | |||||||||||||
3kls | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2009-11-24 | LYS | A:506 | A:506 | 33.0 | 0.165 | S | 56.2 | 61.7 | 33.0 | 0.165 | 0.0 | ||||||
LYS | C:506 | B:506 | 36.0 | 0.18 | S | 57.0 | 61.7 | NA | NA | NA | |||||||||||||
3km9 | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2009-12-01 | LYS | A:506 | A:506 | 43.0 | 0.215 | T | 62.8 | 52.9 | 43.0 | 0.215 | 0.0 | ||||||
LYS | C:506 | B:506 | 41.0 | 0.205 | S | 60.6 | 56.7 | NA | NA | NA | |||||||||||||
4e0s | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2012-04-18 | LYS | A:506 | A:506 | 32.0 | 0.16 | T | 48.1 | 43.7 | 32.0 | 0.16 | 0.0 | ||||||
7nyc | 6 | P01031 | 100.0 | 0.0 |
EM |
2021-10-06 | LYS | G:488 | A:488 | 14.0 | 0.07 | T | 44.0 | -126.0 | 14.0 | 0.07 | 0.0 | ||||||
7nyd | 7 | P01031 | 100.0 | 0.0 |
EM |
2021-10-06 | LYS | H:488 | A:488 | 30.0 | 0.15 | T | 45.7 | -123.5 | 30.0 | 0.15 | 0.0 | ||||||
4a5w | 1 | P01031 | 99.39 | 0.0 |
X-RAY |
2012-03-14 | LYS | A:488 | A:506 | 13.0 | 0.065 | T | 56.7 | 27.2 | 13.0 | 0.065 | 0.0 | ||||||
6h03 | 1 | P01031 | 99.39 | 0.0 |
EM |
2018-12-19 | LYS | A:488 | A:506 | 11.0 | 0.055 | T | 57.2 | 32.2 | 11.0 | 0.055 | 0.0 | ||||||
6h04 | 2 | P01031 | 99.39 | 0.0 |
EM |
2018-12-19 | LYS | S:488 | A:506 | 13.0 | 0.065 | T | 57.5 | 32.0 | 13.0 | 0.065 | 0.0 | ||||||
6i2x | 1 | P01031 | 100.0 | 0.0 |
ELECTRON CRYSTALLOGRAPHY |
2019-06-26 | LYS | A:488 | C:506 | 38.0 | 0.19 | T | 56.1 | 41.5 | 38.0 | 0.19 | 0.0 | ||||||
5hcc | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | LYS | A:488 | B:506 | 52.0 | 0.26 | T | 55.3 | 37.5 | 52.0 | 0.26 | 0.0 |
HOH |
2.836 |
N |
O |
||
5hcd | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | LYS | A:488 | B:506 | 48.0 | 0.24 | T | 55.0 | 37.9 | 48.0 | 0.24 | 0.0 | ||||||
5hce | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | LYS | A:488 | B:506 | 46.0 | 0.23 | T | 56.8 | 37.7 | 46.0 | 0.23 | 0.0 | ||||||
6rqj | 4 | P01031 | 100.0 | 0.0 |
EM |
2020-01-08 | LYS | D:488 | B:506 | 36.0 | 0.18 | T | 56.8 | 18.3 | 36.0 | 0.18 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p01031-f1 | 1 | P01031 | 100.0 | 0.0 | LYS | A:506 | A:506 | 40.0 | 0.2 | T | 52.5 | 36.0 |