Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 123785683 | . | T | A | CCDS6826.1:NM_001735.2:c.1115aAg>aTg_NP_001726.2:p.372K>M | Homo sapiens complement C5 (C5), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3prx | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2011-01-19 | LYS | A:372 | A:372 | 44.0 | 0.22 | E | -127.6 | 120.0 | 44.0 | 0.22 | 0.0 | ||||||
LYS | C:372 | C:372 | 42.0 | 0.21 | E | -126.5 | 119.7 | NA | NA | NA | |||||||||||||
3pvm | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2011-01-19 | LYS | A:372 | A:372 | 42.0 | 0.21 | E | -117.9 | 127.1 | 42.0 | 0.21 | 0.0 | ||||||
LYS | C:372 | C:372 | 41.0 | 0.205 | E | -118.5 | 128.2 | NA | NA | NA | |||||||||||||
5i5k | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-16 | LYS | A:372 | B:372 | 44.0 | 0.22 | E | -109.7 | 112.4 | 44.0 | 0.22 | 0.0 | ||||||
LYS | D:372 | A:372 | 47.0 | 0.235 | E | -109.0 | 111.7 | NA | NA | NA | |||||||||||||
7ad6 | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2021-03-10 | LYS | A:372 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | B:372 | B:372 | 27.0 | 0.135 | E | -145.9 | 127.7 | 27.0 | 0.135 | 0.0 | |||||||||||||
7ad7 | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2021-03-10 | LYS | A:372 | B:372 | 33.0 | 0.165 | E | -115.7 | 118.6 | 33.0 | 0.165 | 0.0 |
HOH |
5.675 |
O |
O |
||
LYS | B:372 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3cu7 | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2008-06-10 | LYS | A:372 | A:372 | 48.0 | 0.24 | E | -102.8 | 105.0 | 48.0 | 0.24 | 0.0 | ||||||
LYS | B:372 | B:372 | 47.0 | 0.235 | E | -102.6 | 105.3 | NA | NA | NA | |||||||||||||
3kls | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2009-11-24 | LYS | A:372 | A:372 | 61.0 | 0.305 | -58.6 | 95.5 | 61.0 | 0.305 | 0.0 | |||||||
LYS | C:372 | B:372 | 58.0 | 0.29 | -59.7 | 96.5 | NA | NA | NA | ||||||||||||||
3km9 | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2009-12-01 | LYS | A:372 | A:372 | 61.0 | 0.305 | E | -107.2 | 87.1 | 61.0 | 0.305 | 0.0 | ||||||
LYS | C:372 | B:372 | 62.0 | 0.31 | E | -103.0 | 83.5 | NA | NA | NA | |||||||||||||
4e0s | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2012-04-18 | LYS | A:372 | A:372 | 19.0 | 0.095 | E | -114.9 | 109.1 | 19.0 | 0.095 | 0.0 |
NA |
9.907 |
NZ |
NA |
||
7nyc | 6 | P01031 | 100.0 | 0.0 |
EM |
2021-10-06 | LYS | G:354 | A:354 | 24.0 | 0.12 | E | -139.6 | 132.8 | 24.0 | 0.12 | 0.0 | ||||||
7nyd | 7 | P01031 | 100.0 | 0.0 |
EM |
2021-10-06 | LYS | H:354 | A:354 | 38.0 | 0.19 | E | -138.1 | 136.4 | 38.0 | 0.19 | 0.0 | ||||||
4a5w | 1 | P01031 | 99.39 | 0.0 |
X-RAY |
2012-03-14 | LYS | A:354 | A:372 | 49.0 | 0.245 | E | -118.4 | 112.7 | 49.0 | 0.245 | 0.0 | ||||||
6h03 | 1 | P01031 | 99.39 | 0.0 |
EM |
2018-12-19 | LYS | A:354 | A:372 | 43.0 | 0.215 | E | -117.1 | 108.8 | 43.0 | 0.215 | 0.0 | ||||||
6h04 | 2 | P01031 | 99.39 | 0.0 |
EM |
2018-12-19 | LYS | S:354 | A:372 | 43.0 | 0.215 | E | -117.2 | 109.1 | 43.0 | 0.215 | 0.0 | ||||||
6i2x | 1 | P01031 | 100.0 | 0.0 |
ELECTRON CRYSTALLOGRAPHY |
2019-06-26 | LYS | A:354 | C:372 | 75.0 | 0.375 | E | -134.2 | 104.6 | 72.0 | 0.36 | 0.015 |
C:Q91132:0.015 |
|||||
5hcc | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | LYS | A:354 | B:372 | 13.0 | 0.065 | E | -115.1 | 100.9 | 13.0 | 0.065 | 0.0 |
HOH |
7.316 |
O |
O |
||
5hcd | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | LYS | A:354 | B:372 | 14.0 | 0.07 | E | -115.0 | 101.5 | 14.0 | 0.07 | 0.0 | ||||||
5hce | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | LYS | A:354 | B:372 | 12.0 | 0.06 | E | -115.4 | 97.9 | 12.0 | 0.06 | 0.0 | ||||||
6rqj | 4 | P01031 | 100.0 | 0.0 |
EM |
2020-01-08 | LYS | D:354 | B:372 | 38.0 | 0.19 | E | -116.8 | 90.3 | 38.0 | 0.19 | 0.0 | ||||||
6rpt | 1 | P01031 | 100.0 | 1e-69 |
X-RAY |
2020-01-08 | LYS | A:45 | E:372 | 70.0 | 0.35 | E | -118.5 | 121.5 | 70.0 | 0.35 | 0.0 |
HOH |
5.906 |
O |
O |
||
LYS | C:45 | A:372 | 66.0 | 0.33 | E | -117.4 | 122.3 | NA | NA | NA | |||||||||||||
LYS | E:45 | C:372 | 89.0 | 0.445 | E | -117.4 | 122.3 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p01031-f1 | 1 | P01031 | 100.0 | 0.0 | LYS | A:372 | A:372 | 8.0 | 0.04 | E | -112.1 | 104.8 |