Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 123792718 . C A CCDS6826.1:NM_001735.2:c.715Ggt>Tgt_NP_001726.2:p.239G>C Homo sapiens complement C5 (C5), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3prx 1 P01031 100.0 0.0 X-RAY
2011-01-19 GLY A:239 A:239 3.0 0.04 -134.9 157.8 3.0 0.04 0.0
GLY C:239 C:239 3.0 0.04 -134.6 158.2 NA NA NA
3pvm 1 P01031 100.0 0.0 X-RAY
2011-01-19 GLY A:239 A:239 7.0 0.093 -136.2 172.0 7.0 0.093 0.0
GLY C:239 C:239 7.0 0.093 -135.4 171.1 NA NA NA
5i5k 1 P01031 100.0 0.0 X-RAY
2016-03-16 GLY A:239 B:239 26.0 0.347 -96.4 173.6 26.0 0.347 0.0
GLY D:239 A:239 21.0 0.28 -96.5 179.8 NA NA NA
7ad6 1 P01031 100.0 0.0 X-RAY
2021-03-10 GLY A:239 NA:NA DO NA DO DO DO NA NA NA
GLY B:239 B:239 18.0 0.24 -94.9 -167.3 18.0 0.24 0.0
7ad7 1 P01031 100.0 0.0 X-RAY
2021-03-10 GLY A:239 B:239 21.0 0.28 -101.6 -169.9 21.0 0.28 0.0 HOH
8.281
CA
O
GLY B:239 NA:NA DO NA DO DO DO NA NA NA
3cu7 1 P01031 99.94 0.0 X-RAY
2008-06-10 GLY A:239 A:239 19.0 0.253 -126.9 178.2 19.0 0.253 0.0
GLY B:239 B:239 18.0 0.24 -126.4 178.0 NA NA NA
3kls 1 P01031 99.94 0.0 X-RAY
2009-11-24 GLY A:239 A:239 17.0 0.227 B -141.0 159.5 17.0 0.227 0.0
GLY C:239 B:239 19.0 0.253 B -142.1 159.6 NA NA NA
3km9 1 P01031 99.94 0.0 X-RAY
2009-12-01 GLY A:239 A:239 23.0 0.307 -84.0 150.6 23.0 0.307 0.0
GLY C:239 B:239 23.0 0.307 -90.3 155.4 NA NA NA
4e0s 1 P01031 99.94 0.0 X-RAY
2012-04-18 GLY A:239 A:239 5.0 0.067 -153.6 -155.3 5.0 0.067 0.0
7nyc 6 P01031 100.0 0.0 EM
2021-10-06 GLY G:221 A:221 2.0 0.027 S -175.7 -162.5 2.0 0.027 0.0
7nyd 7 P01031 100.0 0.0 EM
2021-10-06 GLY H:221 A:221 2.0 0.027 -147.7 -158.7 2.0 0.027 0.0
4a5w 1 P01031 99.39 0.0 X-RAY
2012-03-14 GLY A:221 A:239 26.0 0.347 -106.2 -159.8 26.0 0.347 0.0
6h03 1 P01031 99.39 0.0 EM
2018-12-19 GLY A:221 A:239 25.0 0.333 -107.3 -155.2 25.0 0.333 0.0
6h04 2 P01031 99.39 0.0 EM
2018-12-19 GLY S:221 A:239 24.0 0.32 -107.5 -155.0 24.0 0.32 0.0
6i2x 1 P01031 100.0 0.0 ELECTRON CRYSTALLOGRAPHY
2019-06-26 GLY A:221 C:239 9.0 0.12 -147.6 118.1 9.0 0.12 0.0
5hcc 1 P01031 100.0 0.0 X-RAY
2016-03-30 GLY A:221 B:239 20.0 0.267 -99.0 -167.6 20.0 0.267 0.0 HOH
8.527
CA
O
5hcd 1 P01031 100.0 0.0 X-RAY
2016-03-30 GLY A:221 B:239 20.0 0.267 -98.6 -167.2 20.0 0.267 0.0
5hce 1 P01031 100.0 0.0 X-RAY
2016-03-30 GLY A:221 B:239 21.0 0.28 -98.1 -167.5 21.0 0.28 0.0
6rqj 4 P01031 100.0 0.0 EM
2020-01-08 GLY D:221 B:239 11.0 0.147 -81.7 -140.4 11.0 0.147 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01031-f1 1 P01031 100.0 0.0 GLY A:239 A:239 8.0 0.107 -130.6 -169.0