Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr9 | 123792718 | . | C | A | CCDS6826.1:NM_001735.2:c.715Ggt>Tgt_NP_001726.2:p.239G>C | Homo sapiens complement C5 (C5), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3prx | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2011-01-19 | GLY | A:239 | A:239 | 3.0 | 0.04 | -134.9 | 157.8 | 3.0 | 0.04 | 0.0 | |||||||
GLY | C:239 | C:239 | 3.0 | 0.04 | -134.6 | 158.2 | NA | NA | NA | ||||||||||||||
3pvm | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2011-01-19 | GLY | A:239 | A:239 | 7.0 | 0.093 | -136.2 | 172.0 | 7.0 | 0.093 | 0.0 | |||||||
GLY | C:239 | C:239 | 7.0 | 0.093 | -135.4 | 171.1 | NA | NA | NA | ||||||||||||||
5i5k | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-16 | GLY | A:239 | B:239 | 26.0 | 0.347 | -96.4 | 173.6 | 26.0 | 0.347 | 0.0 | |||||||
GLY | D:239 | A:239 | 21.0 | 0.28 | -96.5 | 179.8 | NA | NA | NA | ||||||||||||||
7ad6 | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2021-03-10 | GLY | A:239 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLY | B:239 | B:239 | 18.0 | 0.24 | -94.9 | -167.3 | 18.0 | 0.24 | 0.0 | ||||||||||||||
7ad7 | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2021-03-10 | GLY | A:239 | B:239 | 21.0 | 0.28 | -101.6 | -169.9 | 21.0 | 0.28 | 0.0 |
HOH |
8.281 |
CA |
O |
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GLY | B:239 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3cu7 | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2008-06-10 | GLY | A:239 | A:239 | 19.0 | 0.253 | -126.9 | 178.2 | 19.0 | 0.253 | 0.0 | |||||||
GLY | B:239 | B:239 | 18.0 | 0.24 | -126.4 | 178.0 | NA | NA | NA | ||||||||||||||
3kls | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2009-11-24 | GLY | A:239 | A:239 | 17.0 | 0.227 | B | -141.0 | 159.5 | 17.0 | 0.227 | 0.0 | ||||||
GLY | C:239 | B:239 | 19.0 | 0.253 | B | -142.1 | 159.6 | NA | NA | NA | |||||||||||||
3km9 | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2009-12-01 | GLY | A:239 | A:239 | 23.0 | 0.307 | -84.0 | 150.6 | 23.0 | 0.307 | 0.0 | |||||||
GLY | C:239 | B:239 | 23.0 | 0.307 | -90.3 | 155.4 | NA | NA | NA | ||||||||||||||
4e0s | 1 | P01031 | 99.94 | 0.0 |
X-RAY |
2012-04-18 | GLY | A:239 | A:239 | 5.0 | 0.067 | -153.6 | -155.3 | 5.0 | 0.067 | 0.0 | |||||||
7nyc | 6 | P01031 | 100.0 | 0.0 |
EM |
2021-10-06 | GLY | G:221 | A:221 | 2.0 | 0.027 | S | -175.7 | -162.5 | 2.0 | 0.027 | 0.0 | ||||||
7nyd | 7 | P01031 | 100.0 | 0.0 |
EM |
2021-10-06 | GLY | H:221 | A:221 | 2.0 | 0.027 | -147.7 | -158.7 | 2.0 | 0.027 | 0.0 | |||||||
4a5w | 1 | P01031 | 99.39 | 0.0 |
X-RAY |
2012-03-14 | GLY | A:221 | A:239 | 26.0 | 0.347 | -106.2 | -159.8 | 26.0 | 0.347 | 0.0 | |||||||
6h03 | 1 | P01031 | 99.39 | 0.0 |
EM |
2018-12-19 | GLY | A:221 | A:239 | 25.0 | 0.333 | -107.3 | -155.2 | 25.0 | 0.333 | 0.0 | |||||||
6h04 | 2 | P01031 | 99.39 | 0.0 |
EM |
2018-12-19 | GLY | S:221 | A:239 | 24.0 | 0.32 | -107.5 | -155.0 | 24.0 | 0.32 | 0.0 | |||||||
6i2x | 1 | P01031 | 100.0 | 0.0 |
ELECTRON CRYSTALLOGRAPHY |
2019-06-26 | GLY | A:221 | C:239 | 9.0 | 0.12 | -147.6 | 118.1 | 9.0 | 0.12 | 0.0 | |||||||
5hcc | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | GLY | A:221 | B:239 | 20.0 | 0.267 | -99.0 | -167.6 | 20.0 | 0.267 | 0.0 |
HOH |
8.527 |
CA |
O |
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5hcd | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | GLY | A:221 | B:239 | 20.0 | 0.267 | -98.6 | -167.2 | 20.0 | 0.267 | 0.0 | |||||||
5hce | 1 | P01031 | 100.0 | 0.0 |
X-RAY |
2016-03-30 | GLY | A:221 | B:239 | 21.0 | 0.28 | -98.1 | -167.5 | 21.0 | 0.28 | 0.0 | |||||||
6rqj | 4 | P01031 | 100.0 | 0.0 |
EM |
2020-01-08 | GLY | D:221 | B:239 | 11.0 | 0.147 | -81.7 | -140.4 | 11.0 | 0.147 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p01031-f1 | 1 | P01031 | 100.0 | 0.0 | GLY | A:239 | A:239 | 8.0 | 0.107 | -130.6 | -169.0 |