Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 123808499 . C A CCDS6826.1:NM_001735.2:c.228gaG>gaT_NP_001726.2:p.76E>D Homo sapiens complement C5 (C5), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3prx 1 P01031 100.0 0.0 X-RAY
2011-01-19 GLU A:76 A:76 156.0 0.821 T -58.0 -18.4 76.0 0.4 0.421 E:D3JIB2:0.421
GLU C:76 C:76 155.0 0.816 T -56.1 -19.4 NA NA NA
3pvm 1 P01031 100.0 0.0 X-RAY
2011-01-19 GLU A:76 A:76 160.0 0.842 T -65.5 -39.9 160.0 0.842 0.0
GLU C:76 C:76 156.0 0.821 G -65.4 -39.9 NA NA NA
5i5k 1 P01031 100.0 0.0 X-RAY
2016-03-16 GLU A:76 B:76 167.0 0.879 T -62.6 -41.3 167.0 0.879 0.0
GLU D:76 A:76 164.0 0.863 T -63.2 -41.3 NA NA NA
7ad6 1 P01031 100.0 0.0 X-RAY
2021-03-10 GLU A:76 NA:NA DO NA DO DO DO NA NA NA
GLU B:76 B:76 192.0 1.0 T -68.2 -27.2 138.0 0.726 0.274 C:None:0.284
7ad7 1 P01031 100.0 0.0 X-RAY
2021-03-10 GLU A:76 B:76 164.0 0.863 T -68.3 -38.0 164.0 0.863 0.0 MHA
HOH
6.512
3.469
O
OE2
N2
O
GLU B:76 NA:NA DO NA DO DO DO NA NA NA
3cu7 1 P01031 99.94 0.0 X-RAY
2008-06-10 GLU A:76 A:76 166.0 0.874 T -73.4 -53.2 166.0 0.874 0.0
GLU B:76 B:76 164.0 0.863 T -73.4 -53.2 NA NA NA
3kls 1 P01031 99.94 0.0 X-RAY
2009-11-24 GLU A:76 A:76 177.0 0.932 T -84.1 -37.1 142.0 0.747 0.185 B:Q6GJP2:0.184
GLU C:76 B:76 177.0 0.932 T -84.2 -37.1 NA NA NA
3km9 1 P01031 99.94 0.0 X-RAY
2009-12-01 GLU A:76 A:76 180.0 0.947 G -73.2 -31.6 134.0 0.705 0.242 B:A6QE84:0.242
GLU C:76 B:76 182.0 0.958 G -74.2 -33.9 NA NA NA
4e0s 1 P01031 99.94 0.0 X-RAY
2012-04-18 GLU A:76 A:76 151.0 0.795 G -58.4 -56.4 151.0 0.795 0.0
7nyc 6 P01031 100.0 0.0 EM
2021-10-06 GLU G:58 A:58 184.0 0.968 G -54.8 -43.8 184.0 0.968 0.0
7nyd 7 P01031 100.0 0.0 EM
2021-10-06 GLU H:58 A:58 176.0 0.926 G -63.3 -29.2 176.0 0.926 0.0
4a5w 1 P01031 99.39 0.0 X-RAY
2012-03-14 GLU A:58 A:76 176.0 0.926 T -66.9 -37.7 176.0 0.926 0.0
6h03 1 P01031 99.39 0.0 EM
2018-12-19 GLU A:58 A:76 169.0 0.889 T -66.8 -42.8 169.0 0.889 0.0
6h04 2 P01031 99.39 0.0 EM
2018-12-19 GLU S:58 A:76 171.0 0.9 T -66.9 -43.1 171.0 0.9 0.0
6i2x 1 P01031 100.0 0.0 ELECTRON CRYSTALLOGRAPHY
2019-06-26 GLU A:58 C:76 145.0 0.763 T -73.7 -24.9 145.0 0.763 0.0
5hcc 1 P01031 100.0 0.0 X-RAY
2016-03-30 GLU A:58 B:76 183.0 0.963 T -55.7 -33.7 183.0 0.963 0.0
5hcd 1 P01031 100.0 0.0 X-RAY
2016-03-30 GLU A:58 B:76 187.0 0.984 T -55.7 -33.8 187.0 0.984 0.0
5hce 1 P01031 100.0 0.0 X-RAY
2016-03-30 GLU A:58 B:76 183.0 0.963 T -56.5 -33.6 183.0 0.963 0.0
6rqj 4 P01031 100.0 0.0 EM
2020-01-08 GLU D:58 B:76 164.0 0.863 T -69.3 -34.1 164.0 0.863 0.0
5b71 3 P01031 100.0 3e-65 X-RAY
2017-05-03 GLU E:62 E:76 164.0 0.863 T -64.5 -48.2 114.0 0.6 0.263 B:None:0.089
A:None:0.221
HOH
2.988
OE1
O
GLU F:62 F:76 161.0 0.847 T -64.1 -42.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01031-f1 1 P01031 100.0 0.0 GLU A:76 A:76 179.0 0.942 G -64.4 -44.3