Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104116358 . T A CCDS782.1:NM_020978.4:c.542cTt>cAt_NP_066188.1:p.181L>H Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 LEU A:166 A:166 1.0 0.006 E -52.5 116.6 1.0 0.006 0.0 GLC
GLC
CA
ACI
HOH
8.942
6.958
7.220
9.063
3.966
N
N
O
O
C
C6
C6
CA
O6
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 LEU A:166 A:166 1.0 0.006 E -53.3 117.1 1.0 0.006 0.0 GLC
G6D
CA
ACI
ACI
HOH
8.843
7.121
7.206
8.885
9.012
3.914
N
N
O
N
O
C
C6
C6
CA
C3
O6
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 LEU A:166 A:166 1.0 0.006 E -51.5 113.6 1.0 0.006 0.0 GLC
G6D
CA
HSD
HSD
HOH
8.848
7.507
7.250
8.950
9.210
3.811
N
N
O
N
O
C
C6
C6
CA
C6
O1
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 LEU A:166 A:166 1.0 0.006 E -51.4 117.7 1.0 0.006 0.0 GLC
G6D
CA
HSD
HSD
HOH
8.878
7.275
7.170
9.258
9.037
3.972
N
N
O
N
O
C
C6
C6
CA
N1
O1
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 LEU A:166 A:166 0.0 0.0 E -58.9 125.0 0.0 0.0 0.0 GLC
GLC
CA
HOH
7.953
6.250
7.086
3.185
H
H
O
HA
H61
H61
CA
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 LEU A:166 A:166 0.0 0.0 E -57.9 105.1 0.0 0.0 0.0 AC1
GLC
G6D
CA
HOH
9.422
8.942
6.899
7.278
5.771
N
N
N
O
O
O6B
C6
C6
CA
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 LEU A:166 A:166 0.0 0.0 E -52.9 124.4 0.0 0.0 0.0 CA
HOH
7.179
3.945
O
CA
CA
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 LEU A:166 A:166 0.0 0.0 E -52.9 119.9 0.0 0.0 0.0 GLC
GLC
CA
HMC
HOH
9.003
6.599
7.182
9.215
3.958
N
N
O
O
CA
C6
O6
CA
O7
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 LEU A:166 A:166 0.0 0.0 E -54.9 105.8 0.0 0.0 0.0 CA
HOH
7.332
2.883
O
CD1
CA
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 LEU A:166 A:166 0.0 0.0 E -54.8 121.6 0.0 0.0 0.0 CA
HOH
7.115
3.964
O
C
CA
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 LEU A:166 A:166 0.0 0.0 E -49.6 110.0 0.0 0.0 0.0 LAG
CA
HOH
7.212
7.162
3.927
N
C
CA
CD6
CA
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 LEU A:166 A:166 0.0 0.0 E -51.4 117.6 0.0 0.0 0.0 LM2
CA
HOH
7.044
7.104
3.837
N
O
C
CD6
CA
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 LEU A:166 A:166 0.0 0.0 E -50.4 121.8 0.0 0.0 0.0 AC1
CA
HOH
9.173
7.051
3.780
O
O
CA
O6B
CA
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 LEU A:166 A:166 0.0 0.0 E -54.4 118.3 0.0 0.0 0.0 AC1
CA
HOH
9.260
7.138
4.062
O
O
C
O6B
CA
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 LEU A:166 A:166 0.0 0.0 E -52.5 115.9 0.0 0.0 0.0 ARE
CA
HOH
6.913
7.147
3.847
N
O
C
O6A
CA
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 LEU A:166 A:166 0.0 0.0 E -53.7 119.5 0.0 0.0 0.0 6SA
CA
HOH
6.687
7.175
3.959
N
O
C
OV6
CA
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 LEU A:166 A:166 1.0 0.006 E -58.1 114.5 1.0 0.006 0.0 CA
HOH
7.165
3.758
O
CA
CA
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 LEU A:166 A:166 1.0 0.006 E -52.3 120.3 1.0 0.006 0.0 CA
QV4
HOH
7.157
6.138
3.932
O
N
C
CA
O3Q
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 LEU A:166 A:166 0.0 0.0 E -53.5 121.0 0.0 0.0 0.0 CA
HOH
7.128
3.948
O
CA
CA
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 LEU A:166 A:166 0.0 0.0 E -50.6 116.6 0.0 0.0 0.0 ARE
CA
HOH
6.913
7.114
3.751
N
O
CA
O6A
CA
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 LEU A:166 A:166 1.0 0.006 E -50.4 121.3 1.0 0.006 0.0 CA
HOH
7.116
3.939
O
C
CA
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 LEU A:166 A:166 0.0 0.0 E -49.8 121.0 0.0 0.0 0.0 B9D
BGC
B8D
CA
HOH
9.120
9.082
6.986
7.052
3.934
N
N
N
O
C
F1
C6
C6
CA
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 LEU A:166 A:166 0.0 0.0 E -52.1 120.8 0.0 0.0 0.0 B9D
CA
HOH
9.230
7.076
3.931
N
O
C
F1
CA
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 LEU A:166 A:166 1.0 0.006 E -52.3 120.7 1.0 0.006 0.0 B9D
BGC
CA
HOH
9.268
8.935
7.081
3.978
N
N
O
C
F1
C6
CA
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 LEU A:166 A:166 0.0 0.0 E -51.9 120.4 0.0 0.0 0.0 CA
HOH
7.163
3.920
O
C
CA
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 LEU A:166 A:166 0.0 0.0 E -51.9 118.5 0.0 0.0 0.0 CA
MYC
HOH
7.119
9.259
3.920
O
O
C
CA
O25
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 LEU A:166 A:166 1.0 0.006 E -57.1 122.2 1.0 0.006 0.0 CA
3L9
HOH
7.237
9.154
3.885
O
N
C
CA
C1
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 LEU A:166 A:166 1.0 0.006 E -58.1 123.1 1.0 0.006 0.0 CA
HOH
7.125
3.255
O
HA
CA
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 LEU A:166 A:166 1.0 0.006 E -57.8 122.5 1.0 0.006 0.0 5J7
CA
HOH
8.344
7.149
3.222
H
O
HA
H23
CA
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 LEU A:166 A:166 1.0 0.006 E -57.6 126.5 1.0 0.006 0.0 5QP
CA
HOH
8.097
7.163
3.209
N
O
HA
HAB1
CA
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 LEU A:166 A:166 0.0 0.0 E -61.6 120.1 0.0 0.0 0.0 CA
HOH
7.197
4.100
O
C
CA
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 LEU A:166 A:166 1.0 0.006 E -58.7 125.4 1.0 0.006 0.0 CA
HOH
7.111
3.217
O
HA
CA
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 LEU A:166 A:166 1.0 0.006 E -62.1 119.1 1.0 0.006 0.0 CA
HOH
7.217
4.312
O
C
CA
O
LEU B:166 B:166 1.0 0.006 E -61.3 118.8 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 LEU A:166 A:166 1.0 0.006 E -59.5 124.2 1.0 0.006 0.0 CA
ZXU
MPD
HOH
7.160
6.639
5.667
3.250
O
H
H
HA
CA
HH
H11
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 LEU A:166 A:166 1.0 0.006 E -59.0 125.0 1.0 0.006 0.0 ZXY
CA
HOH
8.636
7.144
3.242
H
O
HA
HO17
CA
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 LEU A:166 A:166 0.0 0.0 E -52.3 121.5 0.0 0.0 0.0 CA
HOH
7.144
3.914
O
C
CA
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 LEU A:166 A:166 0.0 0.0 E -51.7 118.0 0.0 0.0 0.0 AAO
HOH
6.176
3.946
N
C
O6A
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 LEU A:166 A:166 0.0 0.0 E -53.3 122.8 0.0 0.0 0.0 CA
HOH
7.140
3.935
O
CA
CA
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 LEU A:166 A:166 0.0 0.0 E -53.8 121.2 0.0 0.0 0.0 ARE
CA
HOH
6.788
7.189
4.110
N
O
CA
O6A
CA
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 LEU A:166 A:166 0.0 0.0 E -52.8 119.6 0.0 0.0 0.0 CA
HOH
7.180
4.035
O
CA
CA
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 LEU A:166 A:166 1.0 0.006 E -51.4 121.1 1.0 0.006 0.0 CA
HOH
7.130
4.020
O
C
CA
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 LEU A:166 A:166 0.0 0.0 E -49.1 119.0 0.0 0.0 0.0 ARE
CA
HOH
6.654
7.132
4.109
N
O
CA
O6A
CA
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 LEU A:166 A:166 0.0 0.0 E -49.7 116.9 0.0 0.0 0.0 CA
HOH
7.103
2.783
O
CD1
CA
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 LEU A:166 A:166 0.0 0.0 E -54.9 124.4 0.0 0.0 0.0 CA
HOH
7.102
3.823
O
CA
CA
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 LEU A:166 A:166 0.0 0.0 E -54.7 116.5 0.0 0.0 0.0 GLC
GLC
CA
HOH
8.650
6.619
7.164
4.054
N
N
O
C
C6
O6
CA
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 LEU A:166 A:166 1.0 0.006 E -54.4 122.2 1.0 0.006 0.0 GLC
GLC
GLC
GLC
CA
HOH
9.213
8.925
7.429
7.436
7.174
4.468
N
N
N
N
O
C
C6
C6
C6
O6
CA
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 LEU A:166 A:166 0.0 0.0 E -51.8 122.7 0.0 0.0 0.0 CA
HOH
7.095
2.764
O
CD2
CA
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 LEU A:166 A:166 0.0 0.0 E -52.1 113.3 0.0 0.0 0.0 CA
HOH
7.187
3.978
O
CA
CA
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 LEU A:166 A:166 0.0 0.0 E -51.4 119.6 0.0 0.0 0.0 CA
HOH
7.170
3.921
O
C
CA
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 LEU A:166 A:166 0.0 0.0 E -50.7 121.6 0.0 0.0 0.0 CA
HOH
7.092
3.876
O
C
CA
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 LEU A:166 A:166 0.0 0.0 E -51.3 122.1 0.0 0.0 0.0 CA
HOH
7.116
4.003
O
C
CA
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 LEU A:166 A:166 0.0 0.0 E -50.6 117.9 0.0 0.0 0.0 CA
HOH
7.118
4.017
O
C
CA
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 LEU A:166 A:166 0.0 0.0 E -50.9 118.4 0.0 0.0 0.0 GLC
AGL
HMC
HMC
CA
HOH
8.900
7.258
8.335
9.429
7.256
3.852
N
N
N
O
O
C
C6
C6
O7
O7
CA
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 LEU A:166 A:166 0.0 0.0 E -52.3 121.1 0.0 0.0 0.0 CA
HOH
7.031
3.878
O
CA
CA
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 LEU A:166 A:166 0.0 0.0 E -49.8 115.1 0.0 0.0 0.0 CA
HOH
7.336
7.488
C
C
CA
O
LEU B:166 B:166 0.0 0.0 E -49.8 115.1 0.0 0.0 0.0 CA
HOH
7.336
7.488
C
C
CA
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 LEU A:166 X:166 0.0 0.0 E -57.0 118.9 0.0 0.0 0.0 CA
TAM
HOH
7.160
9.412
3.978
O
O
C
CA
C6
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 LEU A:166 X:166 0.0 0.0 E -54.4 120.4 0.0 0.0 0.0 GLC
HMC
CA
HOH
8.810
9.294
7.167
3.956
N
O
O
C
C6
O7
CA
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 LEU A:166 A:166 0.0 0.0 E -55.7 124.3 0.0 0.0 0.0 CA
HOH
7.097
3.799
O
C
CA
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 LEU A:166 A:166 0.0 0.0 E -60.0 119.7 0.0 0.0 0.0 HMC
CA
HOH
9.366
7.210
3.819
O
O
C
O7
CA
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 LEU A:166 A:166 0.0 0.0 E -57.0 117.7 0.0 0.0 0.0 GLC
AGL
CA
HMC
HOH
8.981
7.322
7.234
9.429
3.900
N
N
O
N
C
C6
C6
CA
O7
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 LEU A:166 X:166 0.0 0.0 E -58.4 122.1 0.0 0.0 0.0 GLC
AGL
CA
HMC
HOH
9.011
7.323
7.116
9.259
3.916
N
N
O
O
C
C6
C6
CA
O7
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 LEU A:166 A:166 0.0 0.0 E -52.7 121.8 0.0 0.0 0.0 CA
HOH
7.170
3.851
O
C
CA
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 LEU A:166 A:166 0.0 0.0 E -61.2 124.5 0.0 0.0 0.0 GLC
AGL
HMC
HMC
CA
HOH
8.946
7.402
8.111
9.232
7.103
3.737
N
N
N
O
O
C
C6
C6
O7
O7
CA
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 LEU A:166 A:166 1.0 0.006 E -59.2 124.0 1.0 0.006 0.0 GLC
CA
HMC
HOH
8.785
7.209
9.266
3.953
N
O
O
C
C6
CA
O7
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 LEU A:166 A:166 0.0 0.0 E -58.0 118.8 0.0 0.0 0.0 CA
HOH
7.163
3.914
O
C
CA
O
LEU B:166 B:166 0.0 0.0 E -58.4 117.8 NA NA NA
LEU C:166 C:166 0.0 0.0 E -56.0 120.1 NA NA NA
LEU D:166 D:166 0.0 0.0 E -53.0 115.5 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 LEU A:166 A:166 0.0 0.0 E -59.2 108.0 0.0 0.0 0.0 CA
HOH
7.324
2.455
O
CD1
CA
O
LEU C:166 C:166 0.0 0.0 E -66.3 109.8 NA NA NA
LEU E:166 E:166 0.0 0.0 E -61.8 118.2 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 LEU A:166 A:166 0.0 0.0 E -60.5 118.0 0.0 0.0 0.0 HOH
3.951
CA
O
LEU B:166 B:166 0.0 0.0 E -66.1 121.9 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 LEU A:166 A:166 0.0 0.0 E -60.3 116.5 0.0 0.0 0.0 CA
HOH
6.457
3.363
O
C
CA
H2
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 LEU A:166 A:166 0.0 0.0 E -59.7 117.7 0.0 0.0 0.0 GLC
GLC
DAF
CA
HOH
8.868
6.293
9.314
7.105
3.820
N
N
O
O
C
C6
O6
O7H
CA
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 LEU A:166 A:166 0.0 0.0 E -65.9 123.3 0.0 0.0 0.0 GLC
GLC
GLC
GLC
GLC
GLC
CA
HOH
8.617
8.075
7.472
8.512
8.279
6.246
7.221
3.211
N
H
H
N
HD23
H
O
HA
H62
H62
H62
H61
O4
HO6
CA
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 LEU A:166 A:166 0.0 0.0 E -61.4 122.7 0.0 0.0 0.0 GLC
GLC
GLC
GLC
CA
HOH
9.961
7.703
8.717
9.877
7.156
3.127
HG
H
H
H
O
HA
H2
H62
H61
O6
CA
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 LEU A:166 A:166 0.0 0.0 E -59.9 122.6 0.0 0.0 0.0 GLC
GLC
GLC
CA
HOH
9.400
8.789
6.885
7.219
3.930
O
N
N
O
C
O6
C6
C6
CA
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 LEU A:166 A:166 0.0 0.0 E -60.5 113.7 0.0 0.0 0.0 CA
NPO
HOH
7.244
9.390
3.968
O
N
CA
CA
C5
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 LEU A:166 A:166 0.0 0.0 E -56.9 117.7 0.0 0.0 0.0 MA3
MA2
HG
CA
HOH
8.917
7.470
6.197
7.211
3.854
N
N
CD1
O
CA
C6
C6
HG
CA
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 LEU A:166 A:166 0.0 0.0 E -60.1 117.3 0.0 0.0 0.0 AC1
GLC
AC1
CA
HOH
9.116
8.875
6.534
7.089
3.991
O
N
N
O
C
O6B
C6
O6B
CA
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 LEU A:166 A:166 0.0 0.0 E -61.0 121.5 0.0 0.0 0.0 AC1
GLC
AC1
CA
HOH
9.385
8.979
7.210
7.214
3.816
O
N
N
O
CD2
O6B
C6
O6B
CA
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 LEU A:166 A:166 0.0 0.0 E -59.1 112.0 0.0 0.0 0.0 BGC
GLC
GLC
CA
EDO
HOH
9.366
8.878
6.858
7.204
9.356
3.970
N
N
N
O
CD1
C
C6
C6
C6
CA
O2
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 LEU A:166 P:166 3.0 0.018 E -54.8 112.5 3.0 0.018 0.0 CA
HOH
7.173
4.133
O
C
CA
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 LEU A:166 A:166 0.0 0.0 E -60.9 117.1 0.0 0.0 0.0 CA
HOH
7.104
4.126
O
C
CA
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 LEU A:166 A:166 0.0 0.0 E -57.9 114.2 0.0 0.0 0.0 GLC
AGL
HMC
CA
HOH
8.851
7.126
9.072
7.254
3.941
N
N
N
O
CA
C6
C6
O7
CA
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 LEU A:166 A:166 0.0 0.0 E -61.6 120.1 0.0 0.0 0.0 CA
HOH
7.078
4.041
O
C
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 LEU A:181 A:181 1.0 0.006 E -64.3 110.0
af-p04746-f1 1 P04746 98.83 0.0 LEU A:181 A:181 0.0 0.0 E -64.8 108.8
af-p0dte7-f1 1 P0DTE7 97.46 0.0 LEU A:181 A:181 1.0 0.006 E -64.8 108.6
af-p0dte8-f1 1 P0DTE8 97.46 0.0 LEU A:181 A:181 0.0 0.0 E -64.0 109.0
af-p0dub6-f1 1 P0DUB6 97.46 0.0 LEU A:181 A:181 0.0 0.0 E -64.0 109.8