Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 109439567 . C A CCDS792.2:NM_013296.4:c.138ttC>ttA_NP_037428.3:p.46F>L Homo sapiens G-protein signaling modulator 2 (GPSM2), transcript variant 3, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3sf4 1 P81274 100.0 0.0 X-RAY
 2011-11-23 PHE A:31 A:39 69.0 0.329 H -64.6 -43.9 69.0 0.329 0.0
PHE B:31 B:39 23.0 NA H -60.0 -26.4 NA NA NA
PHE C:31 C:39 77.0 0.367 H -58.7 -23.8 NA NA NA
4wnd 1 P81274 100.0 0.0 X-RAY
 2015-09-16 PHE A:31 A:39 71.0 0.338 H -71.0 -38.0 71.0 0.338 0.0 PGE
HOH
 3.517
3.873
 CE2
CE2
 O4
O
4wne 1 P81274 100.0 0.0 X-RAY
 2015-09-16 PHE A:31 A:39 71.0 0.338 H -66.5 -38.7 71.0 0.338 0.0 HOH
 3.469
 CZ
 O
4wnf 1 P81274 100.0 0.0 X-RAY
 2015-09-16 PHE A:31 A:39 74.0 0.352 H -67.7 -34.1 74.0 0.352 0.0
4wng 1 P81274 100.0 0.0 X-RAY
 2015-09-16 PHE A:32 A:39 69.0 0.329 H -64.6 -38.8 69.0 0.329 0.0 HOH
 8.903
 O
 O
6hc2 1 P81274 100.0 0.0 X-RAY
 2019-05-29 PHE A:39 A:39 82.0 0.39 H -71.2 -30.9 16.0 0.076 0.314 E:P81274:0.314
PHE C:39 C:39 79.0 0.376 H -71.0 -31.1 4.0 0.019 0.357 A:P81274:0.357
PHE E:39 E:39 81.0 0.386 H -71.0 -31.1 6.0 0.029 0.357 C:P81274:0.357
PHE G:39 G:39 79.0 0.376 H -71.1 -30.9 NA NA NA
PHE I:39 I:39 78.0 0.371 H -71.2 -30.8 NA NA NA
PHE K:39 K:39 81.0 0.386 H -71.2 -30.8 NA NA NA
PHE M:39 M:39 81.0 0.386 H -71.1 -30.7 NA NA NA
PHE O:39 O:39 80.0 0.381 H -71.3 -30.8 NA NA NA
PHE Q:39 Q:39 80.0 0.381 H -71.0 -30.9 NA NA NA
PHE S:39 S:39 81.0 0.386 H -71.4 -30.9 NA NA NA
PHE U:39 U:39 80.0 0.381 H -71.1 -30.8 NA NA NA
PHE W:39 W:39 80.0 0.381 H -71.3 -30.7 NA NA NA
5a6c 1 P81274,P55196 99.7 0.0 X-RAY
 2015-12-30 PHE A:25 A:39 70.0 0.333 H -71.0 -47.2 NA NA NA
PHE B:25 B:39 68.0 0.324 H -70.4 -44.5 68.0 0.324 0.0
3ro2 1 Q8VDU0 98.51 0.0 X-RAY
 2012-03-07 PHE A:27 A:39 75.0 0.357 H -68.6 -37.8 75.0 0.357 0.0 HOH
 7.169
 N
 O
4g2v 1 Q8VDU0 98.51 0.0 X-RAY
 2013-01-23 PHE A:29 A:39 73.0 0.348 H -72.1 -34.7 73.0 0.348 0.0 HOH
 7.996
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p81274-f1 1 P81274 100.0 0.0 PHE A:46 A:46 74.0 0.352 H -69.8 -39.3