Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 109440215 . G A CCDS792.2:NM_013296.4:c.380cGa>cAa_NP_037428.3:p.127R>Q Homo sapiens G-protein signaling modulator 2 (GPSM2), transcript variant 3, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3sf4 1 P81274 100.0 0.0 X-RAY
 2011-11-23 ARG A:112 A:120 97.0 0.431 H -62.5 -44.7 97.0 0.431 0.0 HOH
 3.082
 NH2
 O
ARG B:112 B:120 33.0 NA H -61.2 -45.9 NA NA NA
ARG C:112 C:120 99.0 0.44 H -58.5 -44.3 NA NA NA
4wnd 1 P81274 100.0 0.0 X-RAY
 2015-09-16 ARG A:112 A:120 95.0 0.422 H -63.0 -44.7 95.0 0.422 0.0 SCN
SCN
EDO
HOH
 3.777
8.680
7.202
2.884
 NH2
N
NH2
NE
 S
S
C2
O
4wne 1 P81274 100.0 0.0 X-RAY
 2015-09-16 ARG A:112 A:120 50.0 0.222 H -66.5 -39.5 50.0 0.222 0.0 HOH
 2.661
 NH1
 O
4wnf 1 P81274 100.0 0.0 X-RAY
 2015-09-16 ARG A:112 A:120 93.0 0.413 H -63.0 -39.9 93.0 0.413 0.0
4wng 1 P81274 100.0 0.0 X-RAY
 2015-09-16 ARG A:113 A:120 55.0 0.244 H -66.1 -39.2 55.0 0.244 0.0 HOH
 3.229
 CA
 O
6hc2 1 P81274 100.0 0.0 X-RAY
 2019-05-29 ARG A:120 A:120 78.0 0.347 H -62.5 -41.7 78.0 0.347 0.0
ARG C:120 C:120 103.0 0.458 H -62.1 -41.2 103.0 0.458 0.0
ARG E:120 E:120 89.0 0.396 H -62.0 -41.2 89.0 0.396 0.0
ARG G:120 G:120 97.0 0.431 H -62.4 -41.2 NA NA NA
ARG I:120 I:120 96.0 0.427 H -62.5 -40.5 NA NA NA
ARG K:120 K:120 92.0 0.409 H -62.0 -41.3 NA NA NA
ARG M:120 M:120 107.0 0.476 H -61.9 -41.3 NA NA NA
ARG O:120 O:120 102.0 0.453 H -61.9 -41.1 NA NA NA
ARG Q:120 Q:120 98.0 0.436 H -63.2 -40.5 NA NA NA
ARG S:120 S:120 98.0 0.436 H -62.7 -40.4 NA NA NA
ARG U:120 U:120 100.0 0.444 H -60.9 -41.4 NA NA NA
ARG W:120 W:120 110.0 0.489 H -62.0 -41.1 NA NA NA
5a6c 1 P81274,P55196 99.7 0.0 X-RAY
 2015-12-30 ARG A:106 A:120 52.0 0.231 H -56.2 -47.4 NA NA NA
ARG B:106 B:120 55.0 0.244 H -55.4 -48.5 55.0 0.244 0.0 SO4
 2.846
 NH2
 O3
3ro2 1 Q8VDU0 98.51 0.0 X-RAY
 2012-03-07 ARG A:108 A:120 59.0 0.262 H -63.8 -48.6 59.0 0.262 0.0 GOL
HOH
 8.675
3.129
 N
NH2
 O3
O
4g2v 1 Q8VDU0 98.51 0.0 X-RAY
 2013-01-23 ARG A:110 A:120 81.0 0.36 H -59.5 -47.1 81.0 0.36 0.0 GOL
HOH
 8.335
3.561
 N
N
 O2
O
4jhr 1 Q8VDU0 98.09 0.0 X-RAY
 2013-06-05 ARG A:36 A:120 45.0 NA H -56.0 -52.4 30.0 NA NA B:Q8VDU0:NA
ARG B:36 B:120 45.0 NA H -53.2 -53.6 31.0 NA NA A:Q8VDU0:NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p81274-f1 1 P81274 100.0 0.0 ARG A:127 A:127 104.0 0.462 H -57.6 -40.4