Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 109441314 . G A CCDS792.2:NM_013296.4:c.608cGt>cAt_NP_037428.3:p.203R>H Homo sapiens G-protein signaling modulator 2 (GPSM2), transcript variant 3, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3sf4 1 P81274 100.0 0.0 X-RAY
 2011-11-23 ARG A:188 A:196 116.0 0.516 H -64.1 -40.0 42.0 0.187 0.329 D:Q1MX18:0.329
 HOH
 2.751
 NE
 O
ARG B:188 B:196 118.0 0.524 H -74.7 -34.5 NA NA NA
ARG C:188 C:196 118.0 0.524 H -65.1 -42.6 NA NA NA
4wnd 1 P81274 100.0 0.0 X-RAY
 2015-09-16 ARG A:188 A:196 102.0 0.453 H -67.6 -43.1 66.0 0.293 0.16 B:Q14CM0:0.16
 PEG
HOH
 8.522
2.794
 O
NH1
 C4
O
4wne 1 P81274 100.0 0.0 X-RAY
 2015-09-16 ARG A:188 A:196 87.0 0.387 H -61.9 -48.8 44.0 0.196 0.191 B:Q14CM0:0.191
 HOH
 2.804
 NH2
 O
4wnf 1 P81274 100.0 0.0 X-RAY
 2015-09-16 ARG A:188 A:196 88.0 0.391 H -68.2 -51.9 48.0 0.213 0.178 B:Q14CM0:0.178
4wng 1 P81274 100.0 0.0 X-RAY
 2015-09-16 ARG A:189 A:196 85.0 0.378 H -63.8 -47.6 45.0 0.2 0.178 B:Q14CM0:0.178
 HOH
 2.794
 NH2
 O
6hc2 1 P81274 100.0 0.0 X-RAY
 2019-05-29 ARG A:196 A:196 125.0 0.556 H -62.2 -39.2 67.0 0.298 0.258 B:Q14980:0.258
ARG C:196 C:196 90.0 0.4 H -62.2 -39.4 38.0 0.169 0.231 D:Q14980:0.231
ARG E:196 E:196 123.0 0.547 H -62.0 -39.2 77.0 0.342 0.205 F:Q14980:0.204
ARG G:196 G:196 102.0 0.453 H -61.8 -39.2 NA NA NA
ARG I:196 I:196 118.0 0.524 H -62.1 -39.4 NA NA NA
ARG K:196 K:196 114.0 0.507 H -62.0 -39.3 NA NA NA
ARG M:196 M:196 102.0 0.453 H -62.1 -39.2 NA NA NA
ARG O:196 O:196 118.0 0.524 H -62.1 -39.4 NA NA NA
ARG Q:196 Q:196 88.0 0.391 H -61.7 -39.1 NA NA NA
ARG S:196 S:196 90.0 0.4 H -62.2 -39.3 NA NA NA
ARG U:196 U:196 96.0 0.427 H -61.7 -39.6 NA NA NA
ARG W:196 W:196 114.0 0.507 H -62.2 -39.3 NA NA NA
5a6c 1 P81274,P55196 99.7 0.0 X-RAY
 2015-12-30 ARG A:182 A:196 93.0 0.413 H -67.7 -44.3 NA NA NA
ARG B:182 B:196 75.0 0.333 H -59.9 -48.9 75.0 0.333 0.0
3ro2 1 Q8VDU0 98.51 0.0 X-RAY
 2012-03-07 ARG A:184 A:196 112.0 0.498 H -62.8 -45.7 32.0 0.142 0.356 B:Q14980:0.356
 GOL
HOH
 7.941
2.761
 O
NE
 O2
O
4g2v 1 Q8VDU0 98.51 0.0 X-RAY
 2013-01-23 ARG A:186 A:196 90.0 0.4 H -61.6 -48.3 48.0 0.213 0.187 B:Q5SYB0:0.187
 GOL
GOL
GOL
GOL
GOL
GOL
HOH
 9.058
3.305
2.816
8.375
5.706
7.852
3.015
 NH2
NH2
NH1
O
NH1
NH2
NH2
 O1
C3
O3
O3
O3
O3
O
4jhr 1 Q8VDU0 98.09 0.0 X-RAY
 2013-06-05 ARG A:112 A:196 92.0 0.409 H -65.2 -42.6 26.0 0.116 0.293 B:Q8VDU0:0.293
ARG B:112 B:196 92.0 0.409 H -67.1 -40.7 26.0 0.116 0.293 A:Q8VDU0:0.293
3ro3 1 Q8VDU0 98.15 9e-110 X-RAY
 2012-03-07 ARG A:10 A:196 146.0 0.649 H -59.9 -45.2 146.0 0.649 0.0 GOL
HOH
 2.956
2.778
 NH1
O
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p81274-f1 1 P81274 100.0 0.0 ARG A:203 A:203 64.0 0.284 H -63.5 -47.3