Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 113197270 | . | C | A | CCDS30805.1:NM_006135.2:c.403Cat>Aat_NP_006126.1:p.135H>N | Homo sapiens capping actin protein of muscle Z-line alpha subunit 1 (CAPZA1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5nw4 | 13 | A0PFK5 | 97.9 | 0.0 |
EM |
2017-08-02 | HIS | U:135 | Y:135 | 59.0 | 0.303 | H | -72.3 | -41.6 | 8.0 | 0.041 | 0.262 |
V:D2JYW4:0.262 |
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6f1t | 4 | A0PFK5 | 97.9 | 0.0 |
EM |
2018-01-17 | HIS | K:135 | K:135 | 87.0 | 0.446 | H | -111.3 | -14.5 | 8.0 | 0.041 | 0.405 |
L:A9XFX6:0.405 |
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6f1u | 2 | A0PFK5 | 97.9 | 0.0 |
EM |
2018-01-17 | HIS | D:135 | K:135 | 87.0 | 0.446 | H | -111.3 | -14.5 | 8.0 | 0.041 | 0.405 |
E:A9XFX6:0.405 |
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6f38 | 4 | A0PFK5 | 97.9 | 0.0 |
EM |
2018-01-17 | HIS | K:135 | K:135 | 90.0 | NA | H | -134.4 | -15.2 | 35.0 | NA | NA |
L:A9XFX6:NA |
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6f3a | 4 | A0PFK5 | 97.9 | 0.0 |
EM |
2018-01-17 | HIS | K:135 | K:135 | 90.0 | NA | T | -124.5 | -21.9 | 27.0 | NA | NA |
L:A9XFX6:NA |
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6znl | 4 | A0PFK5 | 97.9 | 0.0 |
EM |
2020-07-29 | HIS | K:135 | K:135 | 70.0 | 0.359 | H | -78.2 | -62.0 | 4.0 | 0.021 | 0.338 |
L:A9XFX6:0.338 |
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5adx | 4 | A0PFK5 | 98.18 | 0.0 |
EM |
2015-12-30 | HIS | K:129 | K:135 | 60.0 | 0.308 | H | -72.3 | -41.6 | 10.0 | 0.051 | 0.257 |
L:D2JYW4:0.256 |
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5afu | 8 | A0PFK5 | 98.18 | 0.0 |
EM |
2015-03-11 | HIS | Q:129 | K:135 | 60.0 | 0.308 | H | -72.3 | -41.6 | 10.0 | 0.051 | 0.257 |
R:D2JYW4:0.256 |
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7ccc | 3 | Q5RKN9 | 96.5 | 0.0 |
X-RAY |
2021-02-03 | HIS | C:135 | C:135 | 69.0 | 0.354 | H | -119.2 | 3.6 | 3.0 | 0.015 | 0.339 |
D:Q923G3:0.338 |
HOH |
5.872 |
O |
O |
|
7pdz | 2 | P47753 | 96.5 | 0.0 |
EM |
2021-09-01 | HIS | B:135 | F:135 | 47.0 | 0.241 | T | -103.6 | -33.4 | 9.0 | 0.046 | 0.195 |
A:P47757:0.195 |
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1izn | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2003-04-08 | HIS | A:135 | A:135 | 83.0 | 0.426 | H | -122.7 | -15.7 | 8.0 | 0.041 | 0.385 |
B:P14315:0.385 |
HOH |
6.737 |
O |
O |
|
HIS | C:135 | C:135 | 75.0 | 0.385 | H | -125.0 | -13.6 | NA | NA | NA | |||||||||||||
2kz7 | 1 | P13127 | 92.31 | 0.0 |
NMR |
2010-07-14 | HIS | A:135 | A:135 | 84.0 | 0.431 | H | -122.7 | -15.7 | 8.0 | 0.041 | 0.39 |
B:P14315:0.39 |
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3aa0 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:135 | A:135 | 62.0 | 0.318 | H | -103.7 | -14.9 | 36.0 | 0.185 | 0.133 |
B:P14315:0.133 |
HOH |
2.736 |
O |
O |
|
3aa1 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:135 | A:135 | 64.0 | 0.328 | H | -100.8 | -13.7 | 36.0 | 0.185 | 0.143 |
B:P14315:0.144 |
HOH |
2.710 |
O |
O |
|
3aa6 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:135 | A:135 | 69.0 | 0.354 | H | -100.3 | -13.7 | 41.0 | 0.21 | 0.144 |
B:P14315:0.144 |
HOH |
2.963 |
O |
O |
|
3aa7 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:135 | A:135 | 78.0 | 0.4 | H | -107.9 | -14.7 | 48.0 | 0.246 | 0.154 |
B:P14315:0.154 |
HOH |
2.798 |
O |
O |
|
3aaa | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:135 | A:135 | 88.0 | 0.451 | H | -121.8 | -5.0 | 10.0 | 0.051 | 0.4 |
B:P14315:0.4 |
HOH |
3.259 |
NE2 |
O |
|
3aae | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-11-17 | HIS | A:135 | A:135 | 79.0 | 0.405 | H | -125.8 | -10.5 | 3.0 | 0.015 | 0.39 |
B:P14315:0.39 |
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HIS | C:135 | C:135 | 77.0 | 0.395 | H | -127.5 | -9.2 | NA | NA | NA | |||||||||||||
HIS | E:135 | E:135 | 80.0 | 0.41 | H | -127.5 | -8.4 | NA | NA | NA | |||||||||||||
HIS | G:135 | G:135 | 80.0 | 0.41 | H | -127.1 | -9.5 | NA | NA | NA | |||||||||||||
HIS | I:135 | I:135 | 80.0 | 0.41 | H | -128.0 | -8.7 | NA | NA | NA | |||||||||||||
3lk2 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-04-07 | HIS | A:135 | A:135 | 66.0 | 0.338 | H | -98.4 | -11.8 | 66.0 | 0.338 | 0.0 |
HOH |
3.086 |
CE1 |
O |
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3lk3 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-04-07 | HIS | A:135 | A:135 | 84.0 | 0.431 | H | -121.3 | -17.1 | 8.0 | 0.041 | 0.39 |
B:P14315:0.39 |
HOH |
3.322 |
NE2 |
O |
|
3lk4 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2010-04-07 | HIS | A:135 | A:135 | 63.0 | 0.323 | H | -95.8 | -17.3 | 40.0 | 0.205 | 0.118 |
B:P14315:0.118 |
HOH |
6.370 |
N |
O |
|
HIS | D:135 | D:135 | 61.0 | 0.313 | H | -97.9 | -14.9 | NA | NA | NA | |||||||||||||
HIS | G:135 | G:135 | 62.0 | 0.318 | H | -96.4 | -17.3 | NA | NA | NA | |||||||||||||
HIS | J:135 | J:135 | 63.0 | 0.323 | H | -98.3 | -15.0 | NA | NA | NA | |||||||||||||
HIS | M:135 | M:135 | 64.0 | 0.328 | H | -96.9 | -16.6 | NA | NA | NA | |||||||||||||
HIS | P:135 | P:135 | 64.0 | 0.328 | H | -96.7 | -14.6 | NA | NA | NA | |||||||||||||
HIS | S:135 | S:135 | 61.0 | 0.313 | H | -98.3 | -14.8 | NA | NA | NA | |||||||||||||
HIS | V:135 | V:135 | 63.0 | 0.323 | H | -96.3 | -16.1 | NA | NA | NA | |||||||||||||
HIS | Y:135 | Y:135 | 63.0 | 0.323 | H | -97.4 | -16.3 | NA | NA | NA | |||||||||||||
HIS | BA:135 | 1:135 | 65.0 | 0.333 | H | -96.1 | -15.6 | NA | NA | NA | |||||||||||||
HIS | EA:135 | 4:135 | 63.0 | 0.323 | H | -98.7 | -14.5 | NA | NA | NA | |||||||||||||
HIS | HA:135 | 7:135 | 64.0 | 0.328 | H | -97.2 | -16.8 | NA | NA | NA | |||||||||||||
7ds2 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:135 | A:135 | 65.0 | 0.333 | H | -108.0 | -12.0 | 38.0 | 0.195 | 0.138 |
B:P14315:0.138 |
HOH |
2.730 |
O |
O |
|
7ds3 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:135 | A:135 | 71.0 | 0.364 | H | -111.7 | -9.3 | 40.0 | 0.205 | 0.159 |
B:P14315:0.159 |
HOH |
4.029 |
CE1 |
O |
|
7ds4 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:135 | A:135 | 68.0 | 0.349 | H | -111.1 | -14.7 | 36.0 | 0.185 | 0.164 |
B:P14315:0.164 |
HOH |
3.055 |
O |
O |
|
7ds6 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:135 | A:135 | 71.0 | 0.364 | H | -102.0 | -13.4 | 43.0 | 0.221 | 0.143 |
B:P14315:0.144 |
HOH |
2.660 |
O |
O |
|
7ds8 | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:135 | A:135 | 66.0 | 0.338 | H | -102.1 | -13.1 | 39.0 | 0.2 | 0.138 |
B:P14315:0.138 |
HOH |
2.942 |
O |
O |
|
7dsa | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:135 | A:135 | 74.0 | 0.379 | H | -130.7 | -14.5 | 42.0 | 0.215 | 0.164 |
B:P14315:0.164 |
MG HOH |
4.289 4.601 |
O O |
MG O |
|
7dsb | 1 | P13127 | 92.31 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:135 | A:135 | 72.0 | 0.369 | H | -120.6 | -7.4 | 45.0 | 0.231 | 0.138 |
B:P14315:0.138 |
HOH |
2.867 |
NE2 |
O |
|
2kxp | 1 | P13127 | 92.36 | 0.0 |
NMR |
2010-06-09 | HIS | A:129 | A:135 | 117.0 | 0.6 | T | -151.0 | -21.6 | 20.0 | 0.103 | 0.497 |
B:P14315:0.497 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p52907-f1 | 1 | P52907 | 100.0 | 0.0 | HIS | A:135 | A:135 | 76.0 | 0.39 | H | -106.1 | -19.9 | |
af-p47755-f1 | 1 | P47755 | 86.71 | 0.0 | HIS | A:135 | A:135 | 58.0 | 0.297 | H | -102.0 | -21.5 |