Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 158151418 . C A CCDS1173.1:NM_001766.3:c.235Cag>Aag_NP_001757.1:p.79Q>K Homo sapiens CD1d molecule (CD1D), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1zt4 1 P15813 100.0 0.0 X-RAY
 2005-07-19 GLN A:61 A:61 149.0 0.828 H -86.3 -44.1 149.0 0.828 0.0
GLN C:61 C:61 139.0 0.772 H -54.8 -55.6 NA NA NA
6v7y 1 P15813 100.0 0.0 X-RAY
 2020-09-16 GLN A:58 A:58 159.0 0.883 H -76.6 -32.3 63.0 0.35 0.533 C:None:0.533
 HOH
 3.948
 NE2
 O
6v7z 1 P15813 100.0 0.0 X-RAY
 2020-09-16 GLN A:58 A:61 71.0 NA H -68.6 -33.6 71.0 NA NA
GLN C:58 C:61 151.0 0.839 H -67.6 -34.6 NA NA NA
6v80 1 P15813 100.0 0.0 X-RAY
 2020-09-16 GLN A:58 A:61 57.0 NA H -109.7 -33.9 28.0 NA NA E:None:NA
GLN F:58 F:61 132.0 0.733 H -85.3 -16.4 NA NA NA
4wwk 3 P15813 99.28 0.0 X-RAY
 2016-02-03 GLN C:62 C:61 143.0 0.794 H -66.2 -47.3 84.0 0.467 0.327 B:None:0.244
A:None:0.078
3huj 1 P15813 99.28 0.0 X-RAY
 2009-07-28 GLN A:62 A:61 144.0 0.8 H -67.9 -38.8 144.0 0.8 0.0 HOH
 9.230
 NE2
 O
GLN C:62 C:61 128.0 0.711 H -62.4 -40.4 NA NA NA
3vwj 1 P15813 99.28 0.0 X-RAY
 2012-10-03 GLN A:62 A:61 91.0 NA H -89.5 4.9 91.0 NA NA
3vwk 1 P15813 99.28 0.0 X-RAY
 2012-10-03 GLN A:62 A:61 75.0 NA H -64.9 -41.9 75.0 NA NA
4ww2 3 P15813 99.28 0.0 X-RAY
 2016-02-03 GLN C:62 C:61 134.0 0.744 H -70.5 -45.9 71.0 0.394 0.35 A:None:0.35
 HOH
 3.173
 N
 O
4en3 1 P15813 100.0 0.0 X-RAY
 2012-10-31 GLN A:62 C:61 134.0 0.744 H -61.2 -36.9 134.0 0.744 0.0
3sdx 1 P15813 100.0 0.0 X-RAY
 2011-10-05 GLN A:56 A:61 138.0 0.767 T -87.2 -33.9 138.0 0.767 0.0
GLN F:56 C:61 157.0 0.872 H -78.0 -42.7 NA NA NA
2po6 1 P15813 100.0 0.0 X-RAY
 2007-07-03 GLN A:56 A:61 145.0 0.806 H -78.9 -29.7 145.0 0.806 0.0
GLN E:56 E:61 135.0 0.75 H -71.2 -40.4 NA NA NA
4lhu 1 P15813 100.0 0.0 X-RAY
 2013-10-02 GLN A:56 A:61 152.0 0.844 H -66.8 -43.1 64.0 0.356 0.488 D:None:0.25
C:None:0.333
 HOH
 3.107
 N
 O
4wo4 1 P15813 100.0 0.0 X-RAY
 2014-11-26 GLN A:56 A:61 69.0 NA H -72.4 -48.6 69.0 NA NA HOH
 3.144
 N
 O
3u0p 1 P15813 98.91 0.0 X-RAY
 2012-04-25 GLN A:62 A:61 162.0 0.9 H -54.5 -60.6 162.0 0.9 0.0
GLN C:62 C:61 139.0 0.772 H -86.3 -9.6 NA NA NA
GLN E:62 NA:NA DO NA DO DO DO NA NA NA
3tzv 3 P15813 98.91 0.0 X-RAY
 2012-04-25 GLN C:60 C:61 132.0 0.733 H -66.0 -68.7 132.0 0.733 0.0
4mng 2 P15813,Q7TMK5 92.06 0.0 X-RAY
 2013-12-18 GLN B:62 A:61 68.0 NA H -64.8 -43.0 68.0 NA NA
GLN D:62 C:61 156.0 0.867 H -65.2 -42.6 NA NA NA
4mq7 1 P15813,Q7TMK5 92.06 0.0 X-RAY
 2013-12-18 GLN A:62 A:61 137.0 0.761 H -78.2 -37.2 137.0 0.761 0.0 HOH
 8.720
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p15813-f1 1 P15813 100.0 0.0 GLN A:79 A:79 139.0 0.772 H -64.4 -41.9