Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 158151950 . C A CCDS1173.1:NM_001766.3:c.457Caa>Aaa_NP_001757.1:p.153Q>K Homo sapiens CD1d molecule (CD1D), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1zt4 1 P15813 100.0 0.0 X-RAY
 2005-07-19 GLN A:135 A:135 189.0 1.0 S -28.8 -85.8 189.0 1.0 0.0
GLN C:135 C:135 190.0 1.0 S -49.9 -63.1 NA NA NA
6v7y 1 P15813 100.0 0.0 X-RAY
 2020-09-16 GLN A:132 A:132 210.0 1.0 S -58.2 -43.4 210.0 1.0 0.0 HOH
 3.386
 N
 O
6v7z 1 P15813 100.0 0.0 X-RAY
 2020-09-16 GLN A:132 A:135 187.0 1.0 T -59.0 -42.8 84.0 0.467 0.533 F:None:0.572
 HOH
 2.649
 O
 O
GLN C:132 C:135 170.0 0.944 T -56.3 -45.2 NA NA NA
6v80 1 P15813 100.0 0.0 X-RAY
 2020-09-16 GLN A:132 A:135 115.0 NA T -63.0 -17.5 115.0 NA NA
GLN F:132 F:135 193.0 1.0 S -56.9 -40.6 NA NA NA
4wwk 3 P15813 99.28 0.0 X-RAY
 2016-02-03 GLN C:136 C:135 118.0 NA T -60.5 -41.3 118.0 NA NA
3huj 1 P15813 99.28 0.0 X-RAY
 2009-07-28 GLN A:136 A:135 204.0 1.0 T -54.0 -40.8 204.0 1.0 0.0 HOH
 3.132
 N
 O
GLN C:136 C:135 204.0 1.0 S -46.0 -45.8 NA NA NA
3vwj 1 P15813 99.28 0.0 X-RAY
 2012-10-03 GLN A:136 A:135 112.0 NA T -60.4 -58.4 112.0 NA NA
3vwk 1 P15813 99.28 0.0 X-RAY
 2012-10-03 GLN A:136 A:135 119.0 NA T -46.9 -39.0 119.0 NA NA
4ww2 3 P15813 99.28 0.0 X-RAY
 2016-02-03 GLN C:136 C:135 119.0 NA S -40.9 -55.1 119.0 NA NA HOH
 4.437
 C
 O
4en3 1 P15813 100.0 0.0 X-RAY
 2012-10-31 GLN A:136 C:135 205.0 1.0 S -48.9 -43.4 205.0 1.0 0.0
3sdx 1 P15813 100.0 0.0 X-RAY
 2011-10-05 GLN A:130 A:135 190.0 1.0 T -49.2 98.0 190.0 1.0 0.0
GLN F:130 C:135 189.0 1.0 T -48.3 100.4 NA NA NA
2po6 1 P15813 100.0 0.0 X-RAY
 2007-07-03 GLN A:130 A:135 206.0 1.0 T -53.9 -45.4 206.0 1.0 0.0
GLN E:130 E:135 183.0 1.0 S 1.9 -101.5 NA NA NA
4lhu 1 P15813 100.0 0.0 X-RAY
 2013-10-02 GLN A:130 A:135 195.0 1.0 S -46.0 -56.3 195.0 1.0 0.0 HOH
 2.906
 NE2
 O
4wo4 1 P15813 100.0 0.0 X-RAY
 2014-11-26 GLN A:130 A:135 114.0 NA T -44.2 -59.6 114.0 NA NA HOH
 5.730
 N
 O
3u0p 1 P15813 98.91 0.0 X-RAY
 2012-04-25 GLN A:136 A:135 209.0 1.0 T -59.2 -34.7 209.0 1.0 0.0 HOH
 7.693
 N
 O
GLN C:136 C:135 207.0 1.0 T -60.5 -33.5 NA NA NA
GLN E:136 E:135 204.0 1.0 T -45.9 -58.8 NA NA NA
3tzv 3 P15813 98.91 0.0 X-RAY
 2012-04-25 GLN C:134 C:135 115.0 NA T -65.2 -10.1 115.0 NA NA
4mng 2 P15813,Q7TMK5 92.06 0.0 X-RAY
 2013-12-18 GLN B:136 A:135 202.0 1.0 S -60.3 -42.1 202.0 1.0 0.0
GLN D:136 C:135 204.0 1.0 S -60.7 -42.9 NA NA NA
4mq7 1 P15813,Q7TMK5 92.06 0.0 X-RAY
 2013-12-18 GLN A:136 A:135 121.0 NA S -56.8 -44.4 121.0 NA NA HOH
 8.159
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p15813-f1 1 P15813 100.0 0.0 GLN A:153 A:153 208.0 1.0 T -59.9 -31.4