Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 16475228 | . | G | A | CCDS169.1:NM_004431.3:c.468ttC>ttT_NP_004422.2:p.156F>F | Homo sapiens EPH receptor A2 (EPHA2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3fl7 | 1 | Q8N3Z2 | 99.42 | 0.0 |
X-RAY |
2009-01-27 | PHE | A:161 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
2x10 | 1 | P29317 | 100.0 | 0.0 |
X-RAY |
2010-03-16 | PHE | A:158 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
2x11 | 1 | P29317 | 100.0 | 0.0 |
X-RAY |
2010-03-16 | PHE | A:158 | A:156 | 108.0 | 0.514 | H | -85.4 | -41.6 | 37.0 | 0.176 | 0.338 |
B:P52803:0.338 |
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3mx0 | 1 | P29317 | 100.0 | 0.0 |
X-RAY |
2010-06-30 | PHE | A:130 | A:156 | 84.0 | 0.4 | H | -95.7 | -64.4 | 38.0 | 0.181 | 0.219 |
B:P52803:0.219 |
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PHE | C:130 | C:156 | 82.0 | 0.39 | H | -73.3 | -60.2 | NA | NA | NA | |||||||||||||
3mbw | 1 | P29317 | 99.03 | 0.0 |
X-RAY |
2010-06-09 | PHE | A:160 | A:156 | 116.0 | 0.552 | H | -64.9 | -52.9 | 37.0 | 0.176 | 0.376 |
B:P20827:0.376 |
HOH |
7.334 |
O |
O |
|
3czu | 1 | P29317 | 98.37 | 2e-127 |
X-RAY |
2008-08-12 | PHE | A:161 | A:156 | 108.0 | 0.514 | H | -77.2 | -53.9 | 41.0 | 0.195 | 0.319 |
B:P20827:0.319 |
HOH |
5.555 |
CZ |
O |
|
3c8x | 1 | P29317 | 98.37 | 2e-127 |
X-RAY |
2008-03-25 | PHE | A:160 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
3skj | 3 | P29317 | 98.37 | 2e-127 |
X-RAY |
2011-08-31 | PHE | E:160 | E:132 | 93.0 | 0.443 | H | -55.4 | -47.6 | 6.0 | 0.029 | 0.414 |
B:None:0.414 |
HOH |
2.979 |
O |
O |
|
PHE | F:160 | F:132 | 104.0 | 0.495 | H | -66.3 | -54.2 | NA | NA | NA | |||||||||||||
7czf | 1 | P29317 | 98.36 | 4e-127 |
X-RAY |
2020-10-21 | PHE | A:129 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
PHE | D:129 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
7b7n | 1 | P29317 | 99.45 | 7e-127 |
X-RAY |
2020-12-30 | PHE | A:134 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6rw2 | 1 | P29317 | 96.7 | 6e-124 |
X-RAY |
2020-04-08 | PHE | A:148 | A:156 | 124.0 | 0.59 | H | -60.8 | -37.4 | 29.0 | 0.138 | 0.452 |
B:None:0.452 |
29N HOH |
7.421 6.170 |
CE1 CE2 |
O15 O |
|
7cze | 3 | P29317 | 100.0 | 1e-123 |
X-RAY |
2020-10-21 | PHE | I:131 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
PHE | J:131 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
PHE | K:131 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
PHE | L:131 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3hei | 1 | P29317 | 100.0 | 7e-123 |
X-RAY |
2009-06-30 | PHE | A:129 | A:129 | 97.0 | 0.462 | H | -61.0 | -52.4 | 25.0 | 0.119 | 0.343 |
B:P20827:0.343 |
HOH |
3.726 |
C |
O |
|
PHE | C:129 | C:129 | 105.0 | 0.5 | H | -59.8 | -49.0 | NA | NA | NA | |||||||||||||
PHE | E:129 | E:129 | 106.0 | 0.505 | H | -70.4 | -53.3 | NA | NA | NA | |||||||||||||
PHE | G:129 | G:129 | 86.0 | 0.41 | H | -64.7 | -55.5 | NA | NA | NA | |||||||||||||
PHE | I:129 | I:129 | 100.0 | 0.476 | H | -69.5 | -56.7 | NA | NA | NA | |||||||||||||
PHE | K:129 | K:129 | 107.0 | 0.51 | H | -64.2 | -44.6 | NA | NA | NA | |||||||||||||
PHE | M:129 | M:129 | 91.0 | 0.433 | H | -69.0 | -49.8 | NA | NA | NA | |||||||||||||
PHE | O:129 | O:129 | 94.0 | 0.448 | T | -75.0 | -33.9 | NA | NA | NA | |||||||||||||
3hpn | 1 | P29317 | 100.0 | 7e-123 |
X-RAY |
2009-06-30 | PHE | A:129 | A:129 | 79.0 | 0.376 | H | -62.7 | -51.0 | 79.0 | 0.376 | 0.0 |
HOH |
3.873 |
CB |
O |
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PHE | B:129 | B:129 | 84.0 | 0.4 | H | -66.5 | -50.3 | NA | NA | NA | |||||||||||||
PHE | C:129 | C:129 | 80.0 | 0.381 | H | -61.2 | -48.3 | NA | NA | NA | |||||||||||||
PHE | D:129 | D:129 | 78.0 | 0.371 | H | -64.4 | -44.3 | NA | NA | NA | |||||||||||||
PHE | E:129 | E:129 | 79.0 | 0.376 | H | -65.3 | -45.8 | NA | NA | NA | |||||||||||||
PHE | F:129 | F:129 | 82.0 | 0.39 | H | -63.8 | -46.3 | NA | NA | NA | |||||||||||||
6b9l | 1 | P29317 | 100.0 | 9e-123 |
X-RAY |
2018-10-17 | PHE | A:151 | A:156 | 92.0 | 0.438 | H | -81.0 | -32.0 | 25.0 | 0.119 | 0.319 |
E:None:0.319 |
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PHE | B:151 | B:156 | 89.0 | 0.424 | H | -67.3 | -42.8 | 23.0 | 0.11 | 0.314 |
F:None:0.314 |
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PHE | C:151 | C:156 | 85.0 | 0.405 | H | -83.8 | -33.1 | 20.0 | 0.095 | 0.31 |
G:None:0.31 |
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PHE | D:151 | D:156 | 89.0 | 0.424 | H | -73.5 | -31.2 | 22.0 | 0.105 | 0.319 |
H:None:0.319 |
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6njz | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | PHE | A:136 | A:156 | 72.0 | 0.343 | H | -59.5 | -49.9 | 13.0 | 0.062 | 0.281 |
C:None:0.281 |
HOH |
3.427 |
HB2 |
O |
|
PHE | B:136 | B:156 | 90.0 | 0.429 | H | -60.2 | -50.5 | NA | NA | NA | |||||||||||||
6nk0 | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | PHE | A:136 | A:156 | 85.0 | 0.405 | H | -54.2 | -47.4 | 24.0 | 0.114 | 0.291 |
C:None:0.29 |
HOH |
2.814 |
HE1 |
O |
|
PHE | B:136 | B:156 | 88.0 | 0.419 | H | -55.7 | -49.9 | NA | NA | NA | |||||||||||||
6nk1 | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | PHE | A:136 | A:156 | 69.0 | 0.329 | H | -59.7 | -45.7 | 13.0 | 0.062 | 0.267 |
C:None:0.267 |
HOH |
3.425 |
HE1 |
O |
|
PHE | B:136 | B:156 | 79.0 | 0.376 | H | -56.3 | -44.6 | NA | NA | NA | |||||||||||||
6nk2 | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | PHE | A:136 | A:156 | 84.0 | 0.4 | H | -57.4 | -46.5 | 22.0 | 0.105 | 0.295 |
C:None:0.295 |
HOH |
3.197 |
HB2 |
O |
|
PHE | B:136 | B:156 | 84.0 | 0.4 | H | -57.6 | -46.2 | NA | NA | NA | |||||||||||||
6nkp | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | PHE | A:136 | A:156 | 94.0 | 0.448 | H | -53.7 | -48.6 | 28.0 | 0.133 | 0.315 |
C:None:0.314 |
HOH |
2.818 |
HE1 |
O |
|
PHE | B:136 | B:156 | 91.0 | 0.433 | H | -53.5 | -47.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p29317-f1 | 1 | P29317 | 100.0 | 0.0 | PHE | A:156 | A:156 | 90.0 | 0.429 | H | -67.0 | -37.8 |