Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 196658627 | . | G | A | CCDS1385.1:NM_000186.3:c.1042Gct>Act_NP_000177.2:p.348A>T | Homo sapiens complement factor H (CFH), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 2uwn | 1 | P08603 | 100.0 | 2e-127 |
X-RAY |
2007-10-02 | ALA | A:29 | A:348 | 40.0 | 0.348 | -68.0 | 154.2 | 40.0 | 0.348 | 0.0 |
HOH |
3.705 |
CB |
O |
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| 2v8e | 1 | P08603 | 100.0 | 2e-127 |
X-RAY |
2007-10-02 | ALA | A:29 | A:348 | 49.0 | 0.426 | -68.0 | 145.5 | 49.0 | 0.426 | 0.0 |
HOH |
3.408 |
CB |
O |
|||
| 4ayd | 1 | P08603 | 100.0 | 1e-82 |
X-RAY |
2012-11-07 | ALA | A:30 | A:348 | 64.0 | 0.557 | -68.0 | 156.1 | 63.0 | 0.548 | 0.009 |
D:Q9JXV4:0.009 |
HOH |
3.083 |
N |
O |
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| ALA | B:30 | B:348 | 65.0 | 0.565 | -68.7 | 157.1 | NA | NA | NA | ||||||||||||||
| ALA | E:30 | E:348 | 63.0 | 0.548 | -68.3 | 157.5 | NA | NA | NA | ||||||||||||||
| 4aye | 1 | P08603 | 100.0 | 1e-82 |
X-RAY |
2012-11-07 | ALA | A:30 | A:348 | 62.0 | 0.539 | -65.4 | 156.8 | 62.0 | 0.539 | 0.0 |
EDO EDO EDO HOH |
6.625 6.807 9.803 7.150 |
CB O CA N |
O1 O2 O1 O |
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| ALA | B:30 | B:348 | 62.0 | 0.539 | -65.0 | 157.0 | NA | NA | NA | ||||||||||||||
| ALA | E:30 | E:348 | 62.0 | 0.539 | -65.8 | 156.9 | NA | NA | NA | ||||||||||||||
| 4ayi | 1 | P08603 | 100.0 | 1e-82 |
X-RAY |
2012-11-07 | ALA | A:30 | A:348 | 61.0 | 0.53 | -70.4 | 162.4 | 61.0 | 0.53 | 0.0 |
HOH |
3.108 |
N |
O |
|||
| ALA | C:30 | E:348 | 69.0 | 0.6 | -70.6 | 162.1 | NA | NA | NA | ||||||||||||||
| 4aym | 1 | P08603 | 100.0 | 1e-82 |
X-RAY |
2012-11-07 | ALA | A:30 | A:348 | 68.0 | 0.591 | -72.4 | 162.0 | NA | NA | NA | |||||||
| ALA | B:30 | B:348 | 67.0 | 0.583 | -72.1 | 162.0 | 67.0 | 0.583 | 0.0 | ||||||||||||||
| ALA | E:30 | E:348 | 65.0 | 0.565 | -72.7 | 161.0 | NA | NA | NA | ||||||||||||||
| ALA | F:30 | F:348 | 66.0 | 0.574 | -72.7 | 160.7 | NA | NA | NA | ||||||||||||||
| 2w80 | 1 | P08603 | 100.0 | 1e-82 |
X-RAY |
2009-03-03 | ALA | A:28 | A:348 | 33.0 | 0.287 | -91.0 | 155.3 | 33.0 | 0.287 | 0.0 |
HOH |
2.984 |
N |
O |
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| ALA | B:28 | B:348 | 27.0 | 0.235 | -96.8 | 162.4 | NA | NA | NA | ||||||||||||||
| ALA | E:28 | E:348 | 31.0 | 0.27 | -90.2 | 159.6 | NA | NA | NA | ||||||||||||||
| ALA | G:28 | G:348 | 30.0 | 0.261 | -89.8 | 160.2 | NA | NA | NA | ||||||||||||||
| 2w81 | 1 | P08603 | 100.0 | 1e-82 |
X-RAY |
2009-03-03 | ALA | A:28 | A:348 | 68.0 | 0.591 | -76.6 | 155.4 | 68.0 | 0.591 | 0.0 |
HOH |
4.042 |
CB |
O |
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| ALA | B:28 | B:348 | 33.0 | 0.287 | -87.4 | 163.7 | NA | NA | NA | ||||||||||||||
| ALA | E:28 | E:348 | 33.0 | 0.287 | -82.0 | 171.5 | NA | NA | NA | ||||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p08603-f1 | 1 | P08603 | 99.92 | 0.0 | ALA | A:348 | A:348 | 66.0 | 0.574 | -66.3 | 148.7 | ||