Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 196799645 . G A CCDS1386.1:NM_002113.2:c.623tGt>tAt_NP_002104.2:p.208C>Y Homo sapiens complement factor H related 1 (CFHR1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3sw0 1 P08603 97.31 3e-134 X-RAY
 2012-03-14 CYS A:66 X:1109 7.0 0.052 B -110.5 158.6 7.0 0.052 0.0 GOL
PO4
HOH
 7.585
6.772
3.576
 N
O
CA
 O3
O3
O
6zh1 2 P08603 98.44 2e-89 X-RAY
 2022-01-12 CYS B:11 B:1109 4.0 0.03 B -99.9 159.7 4.0 0.03 0.0 HOH
 3.321
 CA
 O
3kxv 1 P08603 97.67 2e-89 X-RAY
 2010-05-19 CYS A:11 A:1109 6.0 0.044 B -117.5 157.6 2.0 0.015 0.029 A:P08603:0.03
 SO4
SO4
HOH
 6.131
3.636
4.233
 N
CA
O
 O2
O2
O
3kzj 1 P08603 97.67 2e-89 X-RAY
 2010-05-19 CYS A:11 A:1109 5.0 0.037 B -112.8 158.6 1.0 0.007 0.03 A:P08603:0.03
 SO4
HOH
 6.056
3.304
 N
CB
 O3
O
4muc 1 Q03591 100.0 1e-88 X-RAY
 2015-02-18 CYS A:4 A:208 4.0 0.03 B -112.4 157.9 0.0 0.0 0.03 B:Q03591:0.03
 SO4
 5.662
 N
 O2
CYS B:4 B:208 3.0 0.022 B -116.9 144.5 1.0 0.007 0.015 A:Q03591:0.015
 SO4
 5.118
 N
 O4
5nbq 2 P08603 98.43 1e-88 X-RAY
 2017-12-06 CYS D:6 D:1109 5.0 0.037 B -107.0 157.6 5.0 0.037 0.0
CYS E:6 E:1109 6.0 0.044 B -106.6 156.7 NA NA NA
CYS F:6 F:1109 7.0 0.052 B -115.5 157.3 NA NA NA
2xqw 2 P08603 96.9 2e-88 X-RAY
 2011-02-02 CYS C:11 C:1109 21.0 0.156 360.0 124.4 21.0 0.156 0.0 HOH
 2.653
 N
 O
4j38 2 P08603 96.9 4e-88 X-RAY
 2013-05-15 CYS B:7 B:1109 2.0 0.015 B -104.1 151.0 2.0 0.015 0.0 HOH
 8.348
 SG
 O
3rj3 2 Q03591 99.2 4e-88 X-RAY
 2012-03-14 CYS D:7 D:1109 5.0 0.037 B -110.1 153.7 5.0 0.037 0.0 HOH
 3.217
 CB
 O
CYS E:7 E:1109 4.0 0.03 B -114.2 154.1 NA NA NA
CYS F:7 F:1109 2.0 0.015 B -103.4 138.8 NA NA NA
3oxu 2 Q14006 98.4 3e-87 X-RAY
 2011-02-16 CYS D:7 D:1109 3.0 0.022 B -99.3 159.0 NA NA NA
CYS E:7 E:1109 4.0 0.03 B -105.8 153.3 NA NA NA
CYS F:7 F:1109 24.0 0.178 -103.2 -44.1 24.0 0.178 0.0 HOH
 7.929
 N
 O
4ont 1 P08603 98.4 3e-87 X-RAY
 2014-11-26 CYS A:7 F:1109 6.0 0.044 B -96.4 158.3 6.0 0.044 0.0
CYS C:7 D:1109 2.0 0.015 B -92.2 157.7 NA NA NA
CYS E:7 E:1109 4.0 0.03 B -93.7 155.0 NA NA NA
4zh1 2 P08603 98.4 3e-87 X-RAY
 2016-01-13 CYS D:7 D:1109 5.0 0.037 B -101.7 160.1 NA NA NA
CYS E:7 E:1109 5.0 0.037 B -103.2 158.7 5.0 0.037 0.0 HOH
 4.127
 O
 O
CYS F:7 F:1109 22.0 0.163 360.0 159.9 NA NA NA
2g7i 1 P08603 98.4 5e-87 X-RAY
 2006-05-23 CYS A:3 A:1109 6.0 0.044 B -113.0 155.2 2.0 0.015 0.029 A:P08603:0.03
 HOH
 3.223
 CA
 O
3r62 1 P08603 97.6 2e-86 X-RAY
 2011-06-29 CYS A:7 A:1109 5.0 0.037 B -111.8 154.4 5.0 0.037 0.0 HOH
 3.353
 CA
 O
CYS B:7 B:1109 1.0 0.007 B -102.4 149.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03591-f1 1 Q03591 100.0 0.0 CYS A:208 A:208 3.0 0.022 B -102.4 149.5