Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 196799796 . A C CCDS1386.1:NM_002113.2:c.774gaA>gaC_NP_002104.2:p.258E>D Homo sapiens complement factor H related 1 (CFHR1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3sw0 1 P08603 97.31 3e-134 X-RAY
 2012-03-14 GLU A:116 X:1159 153.0 0.805 -62.2 123.5 153.0 0.805 0.0 HOH
 2.844
 O
 O
6zh1 2 P08603 98.44 2e-89 X-RAY
 2022-01-12 GLU B:61 B:1159 163.0 0.858 -57.0 121.2 163.0 0.858 0.0 EDO
HOH
 4.282
2.809
 N
N
 O2
O
3kxv 1 P08603 97.67 2e-89 X-RAY
 2010-05-19 GLU A:61 A:1159 159.0 0.837 -76.8 125.1 159.0 0.837 0.0 SO4
HOH
 8.285
2.745
 O
OE1
 O4
O
3kzj 1 P08603 97.67 2e-89 X-RAY
 2010-05-19 GLU A:61 A:1159 160.0 0.842 -76.9 124.3 160.0 0.842 0.0 HOH
 2.620
 OE2
 O
4muc 1 Q03591 100.0 1e-88 X-RAY
 2015-02-18 GLU A:54 A:258 164.0 0.863 -65.0 136.0 164.0 0.863 0.0
GLU B:54 B:258 148.0 0.779 -65.0 137.0 148.0 0.779 0.0
5nbq 2 P08603 98.43 1e-88 X-RAY
 2017-12-06 GLU D:56 D:1159 165.0 0.868 -60.5 114.9 165.0 0.868 0.0
GLU E:56 E:1159 158.0 0.832 -65.9 122.4 NA NA NA
GLU F:56 F:1159 168.0 0.884 -54.7 112.2 NA NA NA
2xqw 2 P08603 96.9 2e-88 X-RAY
 2011-02-02 GLU C:61 C:1159 175.0 0.921 -44.0 123.9 175.0 0.921 0.0 HOH
 2.555
 OE2
 O
4j38 2 P08603 96.9 4e-88 X-RAY
 2013-05-15 GLU B:57 B:1159 148.0 0.779 -69.7 127.4 148.0 0.779 0.0 HOH
 5.725
 N
 O
3rj3 2 Q03591 99.2 4e-88 X-RAY
 2012-03-14 GLU D:57 D:1159 161.0 0.847 -56.5 128.3 161.0 0.847 0.0 HOH
 2.630
 O
 O
GLU E:57 E:1159 161.0 0.847 -58.0 122.7 NA NA NA
GLU F:57 F:1159 171.0 0.9 -58.2 133.3 NA NA NA
3oxu 2 Q14006 98.4 3e-87 X-RAY
 2011-02-16 GLU D:57 D:1159 152.0 0.8 -63.7 129.8 NA NA NA
GLU E:57 E:1159 169.0 0.889 -68.0 129.3 NA NA NA
GLU F:57 F:1159 168.0 0.884 -68.8 132.9 168.0 0.884 0.0 HOH
 2.542
 O
 O
4ont 1 P08603 98.4 3e-87 X-RAY
 2014-11-26 GLU A:57 F:1159 162.0 0.853 -72.3 139.9 162.0 0.853 0.0
GLU C:57 D:1159 165.0 0.868 -61.2 127.8 NA NA NA
GLU E:57 E:1159 163.0 0.858 -62.9 131.6 NA NA NA
4zh1 2 P08603 98.4 3e-87 X-RAY
 2016-01-13 GLU D:57 D:1159 165.0 0.868 -50.3 123.1 NA NA NA
GLU E:57 E:1159 167.0 0.879 -49.7 123.1 167.0 0.879 0.0 HOH
 3.143
 O
 O
GLU F:57 F:1159 138.0 NA -50.3 125.0 NA NA NA
2g7i 1 P08603 98.4 5e-87 X-RAY
 2006-05-23 GLU A:53 A:1159 155.0 0.816 -74.4 125.7 155.0 0.816 0.0 HOH
 2.596
 OE2
 O
3r62 1 P08603 97.6 2e-86 X-RAY
 2011-06-29 GLU A:57 A:1159 144.0 0.758 -67.8 126.6 144.0 0.758 0.0 HOH
 2.735
 O
 O
GLU B:57 B:1159 166.0 0.874 -70.3 126.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03591-f1 1 Q03591 100.0 0.0 GLU A:258 A:258 155.0 0.816 -50.1 123.1