Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 196801005 . T A CCDS1386.1:NM_002113.2:c.869tTg>tAg_NP_002104.2:p.290L>* Homo sapiens complement factor H related 1 (CFHR1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3sw0 1 P08603 97.31 3e-134 X-RAY
 2012-03-14 SER A:148 X:1191 1.0 0.009 E -113.7 154.1 1.0 0.009 0.0 GOL
HOH
 9.317
4.886
 O
O
 O2
O
6zh1 2 P08603 98.44 2e-89 X-RAY
 2022-01-12 SER B:93 B:1191 3.0 0.026 E -111.8 134.2 0.0 0.0 0.026 A:W5SB08:0.026
 HOH
 4.720
 O
 O
3kxv 1 P08603 97.67 2e-89 X-RAY
 2010-05-19 SER A:93 A:1191 0.0 0.0 E -121.0 147.0 0.0 0.0 0.0 HOH
 2.727
 OG
 O
3kzj 1 P08603 97.67 2e-89 X-RAY
 2010-05-19 SER A:93 A:1191 1.0 0.009 E -120.1 144.2 1.0 0.009 0.0 HOH
 2.861
 OG
 O
4muc 1 Q03591 100.0 1e-88 X-RAY
 2015-02-18 LEU A:86 A:290 2.0 0.012 E -107.4 125.2 2.0 0.012 0.0 SO4
 8.663
 N
 O1
LEU B:86 B:290 2.0 0.012 E -118.1 125.0 2.0 0.012 0.0 SO4
SO4
SO4
 8.054
9.069
6.014
 N
CD1
CD2
 O4
O3
O3
5nbq 2 P08603 98.43 1e-88 X-RAY
 2017-12-06 SER D:88 D:1191 4.0 0.035 E -79.9 134.1 0.0 0.0 0.035 G:Q45001:0.035
SER E:88 E:1191 4.0 0.035 E -82.2 131.4 NA NA NA
SER F:88 F:1191 4.0 0.035 E -80.5 129.1 NA NA NA
2xqw 2 P08603 96.9 2e-88 X-RAY
 2011-02-02 SER C:93 C:1191 4.0 0.035 E -128.4 132.7 4.0 0.035 0.0 HOH
 5.289
 O
 O
4j38 2 P08603 96.9 4e-88 X-RAY
 2013-05-15 SER B:89 B:1191 4.0 0.035 E -119.9 136.2 0.0 0.0 0.035 A:E4QGX1:0.035
 HOH
 4.838
 O
 O
3rj3 2 Q03591 99.2 4e-88 X-RAY
 2012-03-14 LEU D:89 D:1191 0.0 0.0 E -131.0 127.6 0.0 0.0 0.0 HOH
 4.187
 CA
 O
LEU E:89 E:1191 1.0 0.006 E -111.7 134.0 NA NA NA
LEU F:89 F:1191 0.0 0.0 E -124.8 133.9 NA NA NA
3oxu 2 Q14006 98.4 3e-87 X-RAY
 2011-02-16 SER D:89 D:1191 6.0 0.052 E -121.2 145.1 NA NA NA
SER E:89 E:1191 0.0 0.0 E -117.4 133.3 NA NA NA
SER F:89 F:1191 3.0 0.026 E -123.9 146.5 3.0 0.026 0.0 HOH
 3.155
 CB
 O
4ont 1 P08603 98.4 3e-87 X-RAY
 2014-11-26 SER A:89 F:1191 2.0 0.017 E -124.7 129.1 2.0 0.017 0.0 SIA
HOH
 3.560
9.716
 CB
O
 C11
O
SER C:89 D:1191 1.0 0.009 E -118.3 141.2 NA NA NA
SER E:89 E:1191 2.0 0.017 E -129.3 125.7 NA NA NA
4zh1 2 P08603 98.4 3e-87 X-RAY
 2016-01-13 SER D:89 D:1191 2.0 0.017 E -112.7 136.0 NA NA NA
SER E:89 E:1191 1.0 0.009 E -118.7 131.0 1.0 0.009 0.0 GAL
SIA
HOH
 9.780
3.953
4.698
 OG
CB
O
 O3
C11
O
SER F:89 F:1191 4.0 0.035 E -119.8 130.6 NA NA NA
2g7i 1 P08603 98.4 5e-87 X-RAY
 2006-05-23 SER A:85 A:1191 0.0 0.0 E -114.6 139.7 0.0 0.0 0.0 HOH
 2.789
 OG
 O
3r62 1 P08603 97.6 2e-86 X-RAY
 2011-06-29 SER A:89 A:1191 1.0 0.009 E -110.5 149.6 1.0 0.009 0.0 HOH
 3.592
 CA
 O
SER B:89 B:1191 0.0 0.0 E -79.4 138.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03591-f1 1 Q03591 100.0 0.0 LEU A:290 A:290 9.0 0.053 E -118.3 136.0