Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 196801023 . C A CCDS1386.1:NM_002113.2:c.887gCt>gAt_NP_002104.2:p.296A>D Homo sapiens complement factor H related 1 (CFHR1), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3sw0 1 P08603 97.31 3e-134 X-RAY
2012-03-14 VAL A:154 X:1197 3.0 0.019 E -119.3 126.4 3.0 0.019 0.0 GOL
HOH
9.264
3.610
N
CA
O1
O
6zh1 2 P08603 98.44 2e-89 X-RAY
2022-01-12 VAL B:99 B:1197 4.0 0.026 E -115.4 133.9 0.0 0.0 0.026 A:W5SB08:0.026
EDO
HOH
7.884
5.203
O
N
C2
O
3kxv 1 P08603 97.67 2e-89 X-RAY
2010-05-19 VAL A:99 A:1197 4.0 0.026 E -126.4 135.9 4.0 0.026 0.0 SO4
HOH
7.331
3.693
O
CA
O2
O
3kzj 1 P08603 97.67 2e-89 X-RAY
2010-05-19 VAL A:99 A:1197 3.0 0.019 E -123.7 136.4 3.0 0.019 0.0 SO4
HOH
7.547
3.773
O
CA
O4
O
4muc 1 Q03591 100.0 1e-88 X-RAY
2015-02-18 ALA A:92 A:296 4.0 0.035 E -111.3 123.7 4.0 0.035 0.0
ALA B:92 B:296 1.0 0.009 E -124.3 139.6 1.0 0.009 0.0 SO4
SO4
7.188
5.583
O
N
O4
O3
5nbq 2 P08603 98.43 1e-88 X-RAY
2017-12-06 VAL D:94 D:1197 8.0 0.052 E -142.2 128.7 0.0 0.0 0.052 G:Q45001:0.052
VAL E:94 E:1197 5.0 0.032 E -130.8 117.2 NA NA NA
VAL F:94 F:1197 7.0 0.045 E -139.8 125.8 NA NA NA
2xqw 2 P08603 96.9 2e-88 X-RAY
2011-02-02 VAL C:99 C:1197 6.0 0.039 E -127.3 139.2 6.0 0.039 0.0 HOH
3.802
CA
O
4j38 2 P08603 96.9 4e-88 X-RAY
2013-05-15 VAL B:95 B:1197 7.0 0.045 E -117.1 149.5 0.0 0.0 0.045 A:E4QGX1:0.045
HOH
7.494
N
O
3rj3 2 Q03591 99.2 4e-88 X-RAY
2012-03-14 VAL D:95 D:1197 4.0 0.026 E -131.0 151.1 4.0 0.026 0.0 HOH
5.490
O
O
VAL E:95 E:1197 18.0 0.116 E -134.9 149.6 NA NA NA
VAL F:95 F:1197 9.0 0.058 E -115.6 159.9 NA NA NA
3oxu 2 Q14006 98.4 3e-87 X-RAY
2011-02-16 VAL D:95 D:1197 17.0 0.11 E -112.7 137.7 NA NA NA
VAL E:95 E:1197 13.0 0.084 E -122.8 155.4 NA NA NA
VAL F:95 F:1197 13.0 0.084 E -126.1 140.5 13.0 0.084 0.0 HOH
3.472
CA
O
4ont 1 P08603 98.4 3e-87 X-RAY
2014-11-26 VAL A:95 F:1197 11.0 0.071 E -123.0 164.4 11.0 0.071 0.0 GAL
SIA
7.549
4.098
CA
CG2
O3
C9
VAL C:95 D:1197 17.0 0.11 E -120.0 137.5 NA NA NA
VAL E:95 E:1197 14.0 0.09 E -136.5 154.1 NA NA NA
4zh1 2 P08603 98.4 3e-87 X-RAY
2016-01-13 VAL D:95 D:1197 14.0 0.09 E -131.2 135.5 NA NA NA
VAL E:95 E:1197 15.0 0.097 E -133.6 136.7 15.0 0.097 0.0 GAL
NGA
SIA
HOH
7.458
8.720
3.725
5.163
CA
N
CA
N
O3
C1
O8
O
VAL F:95 F:1197 17.0 0.11 -132.8 135.6 NA NA NA
2g7i 1 P08603 98.4 5e-87 X-RAY
2006-05-23 VAL A:91 A:1197 4.0 0.026 E -123.9 135.3 4.0 0.026 0.0 HOH
3.639
CA
O
3r62 1 P08603 97.6 2e-86 X-RAY
2011-06-29 VAL A:95 A:1197 1.0 0.006 E -118.7 134.9 1.0 0.006 0.0 HOH
3.570
CA
O
VAL B:95 B:1197 2.0 0.013 E -123.8 130.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03591-f1 1 Q03591 100.0 0.0 ALA A:296 A:296 8.0 0.07 E -105.8 148.5