Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 196801023 | . | C | A | CCDS1386.1:NM_002113.2:c.887gCt>gAt_NP_002104.2:p.296A>D | Homo sapiens complement factor H related 1 (CFHR1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3sw0 | 1 | P08603 | 97.31 | 3e-134 |
X-RAY |
2012-03-14 | VAL | A:154 | X:1197 | 3.0 | 0.019 | E | -119.3 | 126.4 | 3.0 | 0.019 | 0.0 |
GOL HOH |
9.264 3.610 |
N CA |
O1 O |
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6zh1 | 2 | P08603 | 98.44 | 2e-89 |
X-RAY |
2022-01-12 | VAL | B:99 | B:1197 | 4.0 | 0.026 | E | -115.4 | 133.9 | 0.0 | 0.0 | 0.026 |
A:W5SB08:0.026 |
EDO HOH |
7.884 5.203 |
O N |
C2 O |
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3kxv | 1 | P08603 | 97.67 | 2e-89 |
X-RAY |
2010-05-19 | VAL | A:99 | A:1197 | 4.0 | 0.026 | E | -126.4 | 135.9 | 4.0 | 0.026 | 0.0 |
SO4 HOH |
7.331 3.693 |
O CA |
O2 O |
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3kzj | 1 | P08603 | 97.67 | 2e-89 |
X-RAY |
2010-05-19 | VAL | A:99 | A:1197 | 3.0 | 0.019 | E | -123.7 | 136.4 | 3.0 | 0.019 | 0.0 |
SO4 HOH |
7.547 3.773 |
O CA |
O4 O |
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4muc | 1 | Q03591 | 100.0 | 1e-88 |
X-RAY |
2015-02-18 | ALA | A:92 | A:296 | 4.0 | 0.035 | E | -111.3 | 123.7 | 4.0 | 0.035 | 0.0 | ||||||
ALA | B:92 | B:296 | 1.0 | 0.009 | E | -124.3 | 139.6 | 1.0 | 0.009 | 0.0 |
SO4 SO4 |
7.188 5.583 |
O N |
O4 O3 |
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5nbq | 2 | P08603 | 98.43 | 1e-88 |
X-RAY |
2017-12-06 | VAL | D:94 | D:1197 | 8.0 | 0.052 | E | -142.2 | 128.7 | 0.0 | 0.0 | 0.052 |
G:Q45001:0.052 |
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VAL | E:94 | E:1197 | 5.0 | 0.032 | E | -130.8 | 117.2 | NA | NA | NA | |||||||||||||
VAL | F:94 | F:1197 | 7.0 | 0.045 | E | -139.8 | 125.8 | NA | NA | NA | |||||||||||||
2xqw | 2 | P08603 | 96.9 | 2e-88 |
X-RAY |
2011-02-02 | VAL | C:99 | C:1197 | 6.0 | 0.039 | E | -127.3 | 139.2 | 6.0 | 0.039 | 0.0 |
HOH |
3.802 |
CA |
O |
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4j38 | 2 | P08603 | 96.9 | 4e-88 |
X-RAY |
2013-05-15 | VAL | B:95 | B:1197 | 7.0 | 0.045 | E | -117.1 | 149.5 | 0.0 | 0.0 | 0.045 |
A:E4QGX1:0.045 |
HOH |
7.494 |
N |
O |
|
3rj3 | 2 | Q03591 | 99.2 | 4e-88 |
X-RAY |
2012-03-14 | VAL | D:95 | D:1197 | 4.0 | 0.026 | E | -131.0 | 151.1 | 4.0 | 0.026 | 0.0 |
HOH |
5.490 |
O |
O |
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VAL | E:95 | E:1197 | 18.0 | 0.116 | E | -134.9 | 149.6 | NA | NA | NA | |||||||||||||
VAL | F:95 | F:1197 | 9.0 | 0.058 | E | -115.6 | 159.9 | NA | NA | NA | |||||||||||||
3oxu | 2 | Q14006 | 98.4 | 3e-87 |
X-RAY |
2011-02-16 | VAL | D:95 | D:1197 | 17.0 | 0.11 | E | -112.7 | 137.7 | NA | NA | NA | ||||||
VAL | E:95 | E:1197 | 13.0 | 0.084 | E | -122.8 | 155.4 | NA | NA | NA | |||||||||||||
VAL | F:95 | F:1197 | 13.0 | 0.084 | E | -126.1 | 140.5 | 13.0 | 0.084 | 0.0 |
HOH |
3.472 |
CA |
O |
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4ont | 1 | P08603 | 98.4 | 3e-87 |
X-RAY |
2014-11-26 | VAL | A:95 | F:1197 | 11.0 | 0.071 | E | -123.0 | 164.4 | 11.0 | 0.071 | 0.0 |
GAL SIA |
7.549 4.098 |
CA CG2 |
O3 C9 |
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VAL | C:95 | D:1197 | 17.0 | 0.11 | E | -120.0 | 137.5 | NA | NA | NA | |||||||||||||
VAL | E:95 | E:1197 | 14.0 | 0.09 | E | -136.5 | 154.1 | NA | NA | NA | |||||||||||||
4zh1 | 2 | P08603 | 98.4 | 3e-87 |
X-RAY |
2016-01-13 | VAL | D:95 | D:1197 | 14.0 | 0.09 | E | -131.2 | 135.5 | NA | NA | NA | ||||||
VAL | E:95 | E:1197 | 15.0 | 0.097 | E | -133.6 | 136.7 | 15.0 | 0.097 | 0.0 |
GAL NGA SIA HOH |
7.458 8.720 3.725 5.163 |
CA N CA N |
O3 C1 O8 O |
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VAL | F:95 | F:1197 | 17.0 | 0.11 | -132.8 | 135.6 | NA | NA | NA | ||||||||||||||
2g7i | 1 | P08603 | 98.4 | 5e-87 |
X-RAY |
2006-05-23 | VAL | A:91 | A:1197 | 4.0 | 0.026 | E | -123.9 | 135.3 | 4.0 | 0.026 | 0.0 |
HOH |
3.639 |
CA |
O |
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3r62 | 1 | P08603 | 97.6 | 2e-86 |
X-RAY |
2011-06-29 | VAL | A:95 | A:1197 | 1.0 | 0.006 | E | -118.7 | 134.9 | 1.0 | 0.006 | 0.0 |
HOH |
3.570 |
CA |
O |
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VAL | B:95 | B:1197 | 2.0 | 0.013 | E | -123.8 | 130.8 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q03591-f1 | 1 | Q03591 | 100.0 | 0.0 | ALA | A:296 | A:296 | 8.0 | 0.07 | E | -105.8 | 148.5 |