Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 196801116 . G A CCDS1386.1:NM_002113.2:c.980tGt>tAt_NP_002104.2:p.327C>Y Homo sapiens complement factor H related 1 (CFHR1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3sw0 1 P08603 97.31 3e-134 X-RAY
 2012-03-14 CYS A:185 X:1228 4.0 0.03 E -121.9 158.6 4.0 0.03 0.0 HOH
 5.011
 O
 O
6zh1 2 P08603 98.44 2e-89 X-RAY
 2022-01-12 CYS B:130 B:1228 5.0 0.037 E -124.3 149.6 5.0 0.037 0.0 EDO
SO4
SO4
HOH
 9.901
6.430
8.762
3.077
 SG
O
N
O
 O1
O2
O1
O
3kxv 1 P08603 97.67 2e-89 X-RAY
 2010-05-19 CYS A:130 A:1228 3.0 0.022 E -111.9 151.3 3.0 0.022 0.0 SO4
HOH
 3.971
5.570
 O
SG
 O3
O
3kzj 1 P08603 97.67 2e-89 X-RAY
 2010-05-19 CYS A:130 A:1228 3.0 0.022 E -114.0 149.1 3.0 0.022 0.0 HOH
 4.599
 O
 O
4muc 1 Q03591 100.0 1e-88 X-RAY
 2015-02-18 CYS A:123 A:327 21.0 0.156 -125.8 360.0 21.0 0.156 0.0
CYS B:123 B:327 8.0 0.059 E -132.0 148.3 8.0 0.059 0.0
5nbq 2 P08603 98.43 1e-88 X-RAY
 2017-12-06 CYS D:125 D:1228 9.0 0.067 E -128.8 147.5 9.0 0.067 0.0
CYS E:125 E:1228 12.0 0.089 B -142.2 136.6 NA NA NA
CYS F:125 F:1228 31.0 0.23 -139.2 360.0 NA NA NA
2xqw 2 P08603 96.9 2e-88 X-RAY
 2011-02-02 CYS C:130 C:1228 1.0 0.007 -130.6 138.5 1.0 0.007 0.0 HOH
 5.251
 SG
 O
4j38 2 P08603 96.9 4e-88 X-RAY
 2013-05-15 CYS B:126 B:1228 18.0 0.133 -128.7 360.0 18.0 0.133 0.0 HOH
 3.056
 O
 O
3rj3 2 Q03591 99.2 4e-88 X-RAY
 2012-03-14 CYS D:126 D:1228 3.0 0.022 E -115.7 130.5 0.0 0.0 0.022 A:P01024:0.022
 HOH
 4.720
 O
 O
CYS E:126 E:1228 5.0 0.037 E -110.6 144.6 NA NA NA
CYS F:126 F:1228 106.0 0.785 -136.6 360.0 NA NA NA
3oxu 2 Q14006 98.4 3e-87 X-RAY
 2011-02-16 CYS D:126 D:1228 3.0 0.022 E -116.1 135.5 NA NA NA
CYS E:126 E:1228 4.0 0.03 E -115.7 147.7 NA NA NA
CYS F:126 F:1228 6.0 0.044 E -123.3 163.5 6.0 0.044 0.0 HOH
 5.399
 SG
 O
4ont 1 P08603 98.4 3e-87 X-RAY
 2014-11-26 CYS A:126 F:1228 5.0 0.037 E -122.1 123.2 5.0 0.037 0.0
CYS C:126 D:1228 3.0 0.022 E -116.9 138.6 NA NA NA
CYS E:126 E:1228 7.0 0.052 E -108.7 149.8 NA NA NA
4zh1 2 P08603 98.4 3e-87 X-RAY
 2016-01-13 CYS D:126 D:1228 4.0 0.03 E -117.2 144.6 NA NA NA
CYS E:126 E:1228 4.0 0.03 E -112.4 144.5 4.0 0.03 0.0 HOH
 5.464
 SG
 O
CYS F:126 NA:NA DO NA DO DO DO NA NA NA
2g7i 1 P08603 98.4 5e-87 X-RAY
 2006-05-23 CYS A:122 A:1228 3.0 0.022 E -114.3 149.2 3.0 0.022 0.0 HOH
 5.676
 SG
 O
3r62 1 P08603 97.6 2e-86 X-RAY
 2011-06-29 CYS A:126 A:1228 1.0 0.007 E -117.3 159.9 1.0 0.007 0.0 HOH
 2.840
 O
 O
CYS B:126 B:1228 2.0 0.015 E -120.7 164.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03591-f1 1 Q03591 100.0 0.0 CYS A:327 A:327 4.0 0.03 E -110.2 130.9