Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 203832842 . G A CCDS30979.1:NM_003094.2:c.133Ggc>Agc_NP_003085.1:p.45G>S Homo sapiens small nuclear ribonucleoprotein polypeptide E (SNRPE), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4f7u 3 P62305 100.0 3e-64 X-RAY
 2013-01-30 GLY E:45 E:3045 0.0 0.0 E 175.8 174.9 0.0 0.0 0.0 HOH
 4.908
 O
 O
GLY F:45 H:3045 0.0 0.0 E 178.6 179.8 NA NA NA
4pjo 5 P62304 100.0 3e-64 X-RAY
 2014-12-31 GLY E:45 E:45 0.0 0.0 E 176.1 176.2 0.0 0.0 0.0
GLY P:45 e:45 0.0 0.0 E 173.9 176.9 NA NA NA
GLY AA:45 S:45 0.0 0.0 E 171.0 174.4 NA NA NA
GLY LA:45 s:45 0.0 0.0 E 170.5 174.9 NA NA NA
4v98 3 P62304 100.0 3e-64 X-RAY
 2014-07-09 GLY C:45 AK:3031 0.0 0.0 E 178.2 -177.4 0.0 0.0 0.0
GLY K:45 AC:3031 0.0 0.0 E 178.0 -177.3 NA NA NA
GLY S:45 AS:3031 0.0 0.0 E 178.4 -177.6 NA NA NA
GLY AA:45 Aa:3031 0.0 0.0 E 178.3 -177.5 NA NA NA
GLY IA:45 Ai:3031 0.0 0.0 E 178.2 -177.5 NA NA NA
GLY QA:45 Aq:3031 0.0 0.0 E 178.4 -177.5 NA NA NA
GLY CB:45 Ay:3031 0.0 0.0 E 178.4 -177.5 NA NA NA
GLY GB:45 BC:3031 0.0 0.0 E 178.3 -177.4 NA NA NA
GLY OB:45 BK:3031 0.0 0.0 E 178.1 -177.3 NA NA NA
GLY WB:45 BS:3031 0.0 0.0 E 178.2 -177.3 NA NA NA
GLY EC:45 Ba:3031 0.0 0.0 E 178.3 -177.6 NA NA NA
GLY MC:45 Bi:3031 0.0 0.0 E 178.2 -177.3 NA NA NA
GLY UC:45 Bq:3031 0.0 0.0 E 178.2 -177.3 NA NA NA
GLY GD:45 By:3031 0.0 0.0 E 178.5 -177.1 NA NA NA
GLY KD:45 CC:3031 0.0 0.0 E 178.3 -177.3 NA NA NA
GLY SD:45 CK:3031 0.0 0.0 E 178.4 -177.2 NA NA NA
GLY AE:45 CS:3031 0.0 0.0 E 178.8 -177.5 NA NA NA
GLY IE:45 Ca:3031 0.0 0.0 E 178.6 -177.6 NA NA NA
GLY QE:45 Ci:3031 0.0 0.0 E 178.5 -177.3 NA NA NA
GLY YE:45 Cq:3031 0.0 0.0 E 178.2 -177.1 NA NA NA
4wzj 6 P62304 100.0 3e-64 X-RAY
 2015-01-14 GLY F:45 E:45 0.0 0.0 E 163.1 174.0 0.0 0.0 0.0
GLY M:45 L:45 0.0 0.0 E 164.4 174.0 NA NA NA
GLY T:45 S:45 0.0 0.0 E 162.3 173.9 NA NA NA
GLY AA:45 EE:45 0.0 0.0 E 164.2 173.6 NA NA NA
GLY HA:45 LL:45 0.0 0.0 E 165.0 174.3 NA NA NA
GLY OA:45 SS:45 0.0 0.0 E 163.8 173.3 NA NA NA
GLY VA:45 EEE:45 0.0 0.0 E 163.4 174.2 NA NA NA
GLY CB:45 LLL:45 0.0 0.0 E 163.4 174.3 NA NA NA
GLY JB:45 SSS:45 0.0 0.0 E 164.0 173.9 NA NA NA
GLY QB:45 EEEE:45 0.0 0.0 E 163.9 173.9 NA NA NA
GLY XB:45 LLLL:45 0.0 0.0 E 163.9 173.9 NA NA NA
GLY EC:45 SSSS:45 0.0 0.0 E 163.4 173.7 NA NA NA
5mqf 24 P62304 100.0 3e-64 EM
 2017-03-22 GLY AA:45 c:45 17.0 0.227 E 177.5 176.8 17.0 0.227 0.0
GLY HA:45 j:45 11.0 0.147 E 163.4 174.2 11.0 0.147 0.0
5o9z 21 P62304 100.0 3e-64 EM
 2017-08-16 GLY U:45 c:45 18.0 0.24 E -166.6 174.1 18.0 0.24 0.0
GLY BA:45 j:45 15.0 0.2 E -168.4 168.8 15.0 0.2 0.0
GLY VA:45 U:45 NA NA NA NA NA NA NA NA
5xjc 32 P62304 100.0 3e-64 EM
 2017-07-05 GLY FA:45 e:45 0.0 0.0 E 163.0 174.0 0.0 0.0 0.0
GLY MA:45 l:45 0.0 0.0 E 163.1 174.0 0.0 0.0 0.0
5xjl 4 P62304 100.0 3e-64 X-RAY
 2018-05-02 GLY D:45 E:45 0.0 0.0 E -174.8 171.3 0.0 0.0 0.0 HOH
 7.716
 CA
 O
5xjq 4 P62304 100.0 3e-64 X-RAY
 2018-07-04 GLY D:45 E:45 0.0 0.0 E -175.5 172.1 0.0 0.0 0.0
5xjr 4 P62304 100.0 3e-64 X-RAY
 2018-07-04 GLY D:45 E:45 0.0 0.0 E -174.4 172.1 0.0 0.0 0.0
5xjs 4 P62304 100.0 3e-64 X-RAY
 2018-07-04 GLY D:45 E:45 0.0 0.0 E -175.6 176.5 0.0 0.0 0.0
5xjt 4 P62304 100.0 3e-64 X-RAY
 2018-07-04 GLY D:45 E:45 0.0 0.0 E -177.4 156.8 0.0 0.0 0.0
5xju 4 P62304 100.0 3e-64 X-RAY
 2018-07-04 GLY D:45 E:45 0.0 0.0 E -167.0 176.8 0.0 0.0 0.0
5yzg 38 P62304 100.0 3e-64 EM
 2018-08-08 GLY OA:45 l:45 0.0 0.0 E 163.0 174.0 0.0 0.0 0.0
GLY XA:45 e:45 0.0 0.0 E 163.0 174.0 0.0 0.0 0.0
5z56 11 P62304 100.0 3e-64 EM
 2018-09-19 GLY K:45 e:45 11.0 0.147 E 163.0 174.1 11.0 0.147 0.0
GLY U:45 l:45 11.0 0.147 E 163.0 174.0 11.0 0.147 0.0
5z57 11 P62304 100.0 3e-64 EM
 2018-09-19 GLY K:45 e:45 11.0 0.147 E 163.0 174.1 11.0 0.147 0.0
GLY U:45 l:45 11.0 0.147 E 163.0 174.0 11.0 0.147 0.0
5z58 11 P62304 100.0 3e-64 EM
 2018-09-19 GLY K:45 e:45 11.0 0.147 E 163.0 174.1 11.0 0.147 0.0
GLY U:45 l:45 11.0 0.147 E 163.0 174.0 11.0 0.147 0.0
6ah0 6 P62304 100.0 3e-64 EM
 2018-11-14 GLY F:45 c:45 24.0 0.32 E -166.7 174.0 24.0 0.32 0.0
GLY BA:45 l:45 19.0 0.253 E 162.9 174.0 19.0 0.253 0.0
GLY XA:45 R:45 25.0 0.333 E -168.5 168.7 25.0 0.333 0.0
6ahd 17 ? 100.0 3e-64 EM
 2018-11-14 GLY Q:45 e:45 19.0 0.253 E 163.0 174.0 19.0 0.253 0.0
GLY HA:45 m:45 20.0 0.267 E 163.0 174.0 20.0 0.267 0.0
GLY XA:45 R:45 25.0 0.333 E -168.5 168.7 25.0 0.333 0.0
6ff7 41 P62304 100.0 3e-64 EM
 2019-03-13 GLY RA:45 c:45 16.0 0.213 E -147.8 -179.0 16.0 0.213 0.0
GLY YA:45 j:45 9.0 0.12 E 163.3 174.2 9.0 0.12 0.0
6icz 34 P62304 100.0 3e-64 EM
 2019-03-13 GLY HA:45 l:45 9.0 0.12 E 163.1 174.1 9.0 0.12 0.0
GLY RA:45 e:45 10.0 0.133 E 163.0 174.1 10.0 0.133 0.0
6id0 25 P62304 100.0 3e-64 EM
 2019-03-13 GLY Y:45 e:45 10.0 0.133 E 162.9 174.1 10.0 0.133 0.0
GLY KA:45 l:45 9.0 0.12 E 163.1 174.0 9.0 0.12 0.0
6id1 24 P62304 100.0 3e-64 EM
 2019-03-13 GLY X:45 e:45 9.0 0.12 E 163.0 174.2 9.0 0.12 0.0
GLY MA:45 l:45 11.0 0.147 E 163.1 174.0 11.0 0.147 0.0
6qw6 11 P62304 100.0 3e-64 EM
 2019-04-17 GLY K:45 4e:45 3.0 0.04 E -175.8 169.7 3.0 0.04 0.0
GLY Z:45 5e:45 0.0 0.0 -174.4 168.5 0.0 0.0 0.0
6qx9 7 P62304 100.0 3e-64 EM
 2019-04-17 GLY G:45 5e:45 0.0 0.0 -174.4 168.5 0.0 0.0 0.0
GLY N:45 4e:45 3.0 0.04 E -175.8 169.7 3.0 0.04 0.0
GLY VA:45 1e:45 0.0 0.0 E 170.4 174.9 0.0 0.0 0.0
GLY EB:45 2e:45 0.0 0.0 E -169.1 167.7 0.0 0.0 0.0
6v4x 4 P62304 100.0 3e-64 EM
 2020-02-19 GLY D:45 E:45 0.0 0.0 -138.2 -167.1 0.0 0.0 0.0
6y53 14 P62304 100.0 3e-64 EM
 2020-06-17 GLY N:45 j:45 24.0 0.32 E 179.7 -174.8 24.0 0.32 0.0
6y5q 19 P62304 100.0 3e-64 EM
 2020-06-17 GLY S:45 j:45 24.0 0.32 E 179.7 -174.8 24.0 0.32 0.0
7a5p 25 P62304 100.0 3e-64 EM
 2020-10-14 GLY BA:45 e:45 11.0 0.147 E 159.9 174.9 11.0 0.147 0.0
GLY GA:45 j:45 10.0 0.133 E 161.2 175.1 10.0 0.133 0.0
7abg 48 P62304 100.0 3e-64 EM
 2020-12-23 GLY VA:45 j:45 9.0 0.12 E -169.1 167.7 9.0 0.12 0.0
GLY BB:45 c:45 17.0 0.227 E -166.8 171.5 17.0 0.227 0.0
7abi 40 P62304 100.0 3e-64 EM
 2021-02-10 GLY PA:45 j:45 9.0 0.12 E -169.1 167.7 9.0 0.12 0.0
GLY DB:45 c:45 17.0 0.227 E -167.2 173.1 17.0 0.227 0.0
7b0y 21 P62304 100.0 3e-64 EM
 2021-01-13 GLY U:45 g:45 0.0 0.0 E -175.9 170.8 0.0 0.0 0.0
7dvq 11 P62304 100.0 3e-64 EM
 2021-03-31 GLY K:45 e:45 11.0 0.147 E 163.1 174.0 11.0 0.147 0.0
GLY U:45 l:45 9.0 0.12 E 163.1 174.2 9.0 0.12 0.0
6qdv 34 P62304 100.0 2e-55 EM
 2019-02-20 GLY HA:35 e:45 0.0 0.0 E 173.8 165.7 0.0 0.0 0.0
GLY SA:35 p:45 0.0 0.0 E -169.0 167.8 0.0 0.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p62304-f1 1 P62304 100.0 1e-64 GLY A:45 A:45 0.0 0.0 E -177.7 171.6