Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 218610705 | . | G | A | CCDS1521.1:NM_003238.3:c.953tGc>tAc_NP_003229.1:p.318C>Y | Homo sapiens transforming growth factor beta 2 (TGFB2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1tfg | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
1993-10-31 | CYS | A:16 | A:16 | 0.0 | 0.0 | E | -164.0 | 160.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.723 |
CB |
O |
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2tgi | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
1994-01-31 | CYS | A:16 | A:16 | 0.0 | 0.0 | E | -163.1 | 160.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.514 |
CB |
O |
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4kxz | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
2014-09-24 | CYS | A:16 | A:16 | 1.0 | 0.007 | E | -154.4 | 161.1 | 1.0 | 0.007 | 0.0 |
HOH |
7.378 |
SG |
O |
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CYS | B:16 | B:16 | 1.0 | 0.007 | E | -152.8 | 155.6 | 1.0 | 0.007 | 0.0 | |||||||||||||
CYS | C:16 | D:16 | 2.0 | 0.015 | E | -156.4 | 161.9 | NA | NA | NA | |||||||||||||
CYS | D:16 | E:16 | 0.0 | 0.0 | E | -153.1 | 162.9 | NA | NA | NA | |||||||||||||
6i9j | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
2019-07-03 | CYS | A:16 | A:318 | 1.0 | 0.007 | E | -163.3 | 162.9 | 1.0 | 0.007 | 0.0 |
HOH |
7.630 |
N |
O |
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6xm2 | 3 | P61812 | 100.0 | 2e-79 |
X-RAY |
2021-07-07 | CYS | I:16 | I:318 | 1.0 | 0.007 | E | -159.1 | 166.2 | NA | NA | NA | ||||||
CYS | J:16 | J:318 | 1.0 | 0.007 | E | -179.5 | 171.5 | NA | NA | NA | |||||||||||||
CYS | K:16 | K:318 | 1.0 | 0.007 | E | -159.7 | 162.0 | 1.0 | 0.007 | 0.0 |
HOH |
3.648 |
CB |
O |
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CYS | L:16 | L:318 | 1.0 | 0.007 | E | 160.8 | 175.1 | 1.0 | 0.007 | 0.0 |
HOH |
5.027 |
SG |
O |
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7rco | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
2021-09-29 | CYS | A:16 | A:318 | 2.0 | 0.015 | E | -162.9 | 165.1 | 2.0 | 0.015 | 0.0 |
HOH |
8.253 |
O |
O |
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CYS | B:16 | B:318 | 0.0 | 0.0 | E | -140.7 | 170.4 | 0.0 | 0.0 | 0.0 |
HOH |
7.678 |
O |
O |
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5ty4 | 2 | ? | 92.78 | 2e-64 |
ELECTRON CRYSTALLOGRAPHY |
2017-04-26 | CYS | B:2 | B:316 | 111.0 | 0.822 | -122.4 | 152.2 | 111.0 | 0.822 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p61812-f1 | 1 | P61812 | 93.44 | 0.0 | CYS | A:318 | A:318 | 6.0 | 0.044 | E | -149.0 | 160.8 |