Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 218610711 | . | G | A | CCDS1521.1:NM_003238.3:c.959cGt>cAt_NP_003229.1:p.320R>H | Homo sapiens transforming growth factor beta 2 (TGFB2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1tfg | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
1993-10-31 | ARG | A:18 | A:18 | 30.0 | 0.133 | E | -125.0 | 138.3 | 30.0 | 0.133 | 0.0 |
HOH |
3.090 |
NH1 |
O |
||
2tgi | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
1994-01-31 | ARG | A:18 | A:18 | 39.0 | 0.173 | E | -121.8 | 137.0 | 39.0 | 0.173 | 0.0 |
HOH |
3.021 |
NH1 |
O |
||
4kxz | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
2014-09-24 | ARG | A:18 | A:18 | 60.0 | 0.267 | E | -111.9 | 141.6 | 60.0 | 0.267 | 0.0 |
HOH |
8.874 |
N |
O |
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ARG | B:18 | B:18 | 57.0 | 0.253 | E | -108.9 | 141.4 | 57.0 | 0.253 | 0.0 |
HOH |
9.908 |
CB |
O |
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ARG | C:18 | D:18 | 64.0 | 0.284 | E | -107.7 | 143.3 | NA | NA | NA | |||||||||||||
ARG | D:18 | E:18 | 54.0 | 0.24 | E | -108.5 | 140.7 | NA | NA | NA | |||||||||||||
6i9j | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
2019-07-03 | ARG | A:18 | A:320 | 50.0 | 0.222 | E | -125.3 | 136.2 | 50.0 | 0.222 | 0.0 |
HOH |
5.656 |
O |
O |
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6xm2 | 3 | P61812 | 100.0 | 2e-79 |
X-RAY |
2021-07-07 | ARG | I:18 | I:320 | 40.0 | 0.178 | E | -124.8 | 138.3 | NA | NA | NA | ||||||
ARG | J:18 | J:320 | 43.0 | 0.191 | E | -122.1 | 138.5 | NA | NA | NA | |||||||||||||
ARG | K:18 | K:320 | 41.0 | 0.182 | E | -121.7 | 139.8 | 12.0 | 0.053 | 0.129 |
B:None:0.129 |
HOH |
3.212 |
CD |
O |
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ARG | L:18 | L:320 | 43.0 | 0.191 | E | -122.9 | 133.1 | 20.0 | 0.089 | 0.102 |
H:None:0.102 |
HOH |
3.463 |
CD |
O |
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7rco | 1 | P61812 | 100.0 | 2e-79 |
X-RAY |
2021-09-29 | ARG | A:18 | A:320 | 43.0 | 0.191 | E | -143.2 | 136.8 | 16.0 | 0.071 | 0.12 |
D:None:0.12 |
HOH |
9.167 |
CG |
O |
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ARG | B:18 | B:320 | 53.0 | 0.236 | E | -119.0 | 133.1 | 22.0 | 0.098 | 0.138 |
F:None:0.138 |
HOH |
7.960 |
O |
O |
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5ty4 | 2 | ? | 92.78 | 2e-64 |
ELECTRON CRYSTALLOGRAPHY |
2017-04-26 | ARG | B:4 | B:318 | 24.0 | 0.107 | -156.9 | 151.9 | 24.0 | 0.107 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p61812-f1 | 1 | P61812 | 93.44 | 0.0 | ARG | A:320 | A:320 | 35.0 | 0.156 | E | -111.6 | 137.0 |