Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 218610792 . C A CCDS1521.1:NM_003238.3:c.1040gCt>gAt_NP_003229.1:p.347A>D Homo sapiens transforming growth factor beta 2 (TGFB2), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1tfg 1 P61812 100.0 2e-79 X-RAY
 1993-10-31 ALA A:45 A:45 33.0 0.287 E -167.4 147.8 25.0 0.217 0.07 A:P61812:0.07
 HOH
 3.521
 CA
 O
2tgi 1 P61812 100.0 2e-79 X-RAY
 1994-01-31 ALA A:45 A:45 34.0 0.296 E -158.3 149.3 26.0 0.226 0.07 A:P61812:0.07
 HOH
 3.664
 CA
 O
4kxz 1 P61812 100.0 2e-79 X-RAY
 2014-09-24 ALA A:45 A:45 33.0 0.287 E -152.4 155.9 18.0 0.157 0.13 B:P61812:0.13
ALA B:45 B:45 32.0 0.278 E -151.9 154.9 23.0 0.2 0.078 A:P61812:0.078
 HOH
 8.877
 CB
 O
ALA C:45 D:45 33.0 0.287 E -154.5 150.0 NA NA NA
ALA D:45 E:45 32.0 0.278 E -152.0 154.5 NA NA NA
6i9j 1 P61812 100.0 2e-79 X-RAY
 2019-07-03 ALA A:45 A:347 35.0 0.304 E -159.3 152.9 34.0 0.296 0.008 A:P61812:0.009
 HOH
 3.553
 CA
 O
6xm2 3 P61812 100.0 2e-79 X-RAY
 2021-07-07 ALA I:45 I:347 35.0 0.304 E -159.2 152.7 NA NA NA
ALA J:45 J:347 33.0 0.287 E -160.6 152.8 NA NA NA
ALA K:45 K:347 33.0 0.287 E -163.2 149.3 12.0 0.104 0.183 B:None:0.174
L:P61812:0.043
 HOH
 3.315
 O
 O
ALA L:45 L:347 34.0 0.296 E -161.2 151.5 14.0 0.122 0.174 H:None:0.165
K:P61812:0.043
 HOH
 3.446
 CA
 O
7rco 1 P61812 100.0 2e-79 X-RAY
 2021-09-29 ALA A:45 A:347 32.0 0.278 E -166.1 148.8 14.0 0.122 0.156 B:P61812:0.043
D:None:0.148
 HOH
 6.026
 N
 O
ALA B:45 B:347 36.0 0.313 E -156.7 151.1 16.0 0.139 0.174 A:P61812:0.035
F:None:0.165
 HOH
 5.168
 N
 O
5ty4 2 ? 92.78 2e-64 ELECTRON CRYSTALLOGRAPHY
 2017-04-26 ALA B:31 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p61812-f1 1 P61812 93.44 0.0 ALA A:347 A:347 5.0 0.043 E -153.0 150.1