Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 218614634 . A C CCDS1521.1:NM_003238.3:c.1175tAc>tCc_NP_003229.1:p.392Y>S Homo sapiens transforming growth factor beta 2 (TGFB2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1tfg 1 P61812 100.0 2e-79 X-RAY
1993-10-31 TYR A:90 A:90 31.0 0.135 E -137.5 154.3 31.0 0.135 0.0 HOH
3.864
OH
O
2tgi 1 P61812 100.0 2e-79 X-RAY
1994-01-31 TYR A:90 A:90 31.0 0.135 E -140.4 159.6 31.0 0.135 0.0
4kxz 1 P61812 100.0 2e-79 X-RAY
2014-09-24 TYR A:90 A:90 49.0 0.213 E -134.9 159.1 0.0 0.0 0.213 E:None:0.213
MES
HOH
6.074
3.353
OH
CA
C2
O
TYR B:90 B:90 51.0 0.222 E -140.4 158.4 6.0 0.026 0.196 F:None:0.196
HOH
7.033
OH
O
TYR C:90 D:90 48.0 0.209 E -132.5 158.2 NA NA NA
TYR D:90 E:90 48.0 0.209 E -137.4 156.8 NA NA NA
6i9j 1 P61812 100.0 2e-79 X-RAY
2019-07-03 TYR A:90 A:392 51.0 0.222 E -134.9 178.8 51.0 0.222 0.0 HOH
6.056
OH
O
6xm2 3 P61812 100.0 2e-79 X-RAY
2021-07-07 TYR I:90 I:392 51.0 0.222 E -143.1 168.3 NA NA NA
TYR J:90 J:392 29.0 0.126 E -141.9 166.4 NA NA NA
TYR K:90 K:392 36.0 0.157 E -134.8 172.3 36.0 0.157 0.0 HOH
3.745
CA
O
TYR L:90 L:392 40.0 0.174 E -138.0 168.2 40.0 0.174 0.0 HOH
7.213
O
O
7rco 1 P61812 100.0 2e-79 X-RAY
2021-09-29 TYR A:90 A:392 48.0 0.209 B -154.4 163.3 48.0 0.209 0.0
TYR B:90 B:392 51.0 0.222 E -127.5 178.4 51.0 0.222 0.0 HOH
9.326
CE1
O
5ty4 2 ? 92.78 2e-64 ELECTRON CRYSTALLOGRAPHY
2017-04-26 TYR B:76 B:390 68.0 0.296 E -163.4 164.7 60.0 0.261 0.035 A:P37173:0.035

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p61812-f1 1 P61812 93.44 0.0 TYR A:392 A:392 4.0 0.017 E -142.3 168.7