Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 22405041 . A C CCDS221.1:NM_001039802.1:c.70Aca>Cca_NP_001034891.1:p.24T>P Homo sapiens cell division cycle 42 (CDC42), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2odb 1 P60953 100.0 1e-141 X-RAY
 2007-01-30 THR A:25 A:24 36.0 0.257 H -67.6 -30.6 11.0 0.079 0.178 B:Q9NQU5:0.179
 HOH
 4.046
 O
 O
5c2j 2 P60766 100.0 1e-141 X-RAY
 2016-06-22 THR B:31 B:24 41.0 0.293 H -67.2 -24.3 41.0 0.293 0.0 HOH
 8.169
 OG1
 O
2dfk 2 P60953 100.0 1e-141 X-RAY
 2006-05-02 THR B:27 B:24 26.0 0.186 H -97.6 -7.8 26.0 0.186 0.0 GOL
HOH
 4.727
2.758
 N
OG1
 O2
O
THR D:27 D:24 34.0 0.243 H -82.0 -31.0 NA NA NA
1grn 1 P60953 100.0 2e-141 X-RAY
 1999-12-22 THR A:24 A:24 42.0 0.3 H -76.9 -32.1 42.0 0.3 0.0 HOH
 3.629
 O
 O
2ngr 1 P60953 100.0 2e-141 X-RAY
 1999-01-06 THR A:24 A:24 45.0 0.321 H -84.9 -31.5 45.0 0.321 0.0 HOH
 2.820
 OG1
 O
4itr 2 P60953 100.0 2e-141 X-RAY
 2013-02-20 THR C:24 C:24 30.0 0.214 H -81.1 -28.0 30.0 0.214 0.0 HOH
 2.797
 OG1
 O
THR D:24 D:24 22.0 0.157 H -86.5 -21.0 22.0 0.157 0.0 HOH
 5.166
 N
 O
6siu 2 P60953 100.0 3e-141 X-RAY
 2020-03-18 THR C:25 C:24 30.0 0.214 H -84.9 -24.4 30.0 0.214 0.0
THR D:25 D:24 31.0 0.221 H -84.7 -26.8 31.0 0.221 0.0 HOH
 9.345
 CG2
 O
5fi1 2 P60953 100.0 3e-141 X-RAY
 2016-04-20 THR B:27 B:24 33.0 0.236 H -69.9 -48.7 33.0 0.236 0.0
1an0 1 P60953 100.0 1e-140 X-RAY
 1999-01-13 THR A:24 A:24 39.0 0.279 H -78.6 -32.9 39.0 0.279 0.0 HOH
 2.990
 OG1
 O
THR B:24 B:24 44.0 0.314 H -72.8 -41.4 44.0 0.314 0.0 HOH
 4.088
 CG2
 O
1a4r 1 P60953 99.48 4e-140 X-RAY
 1999-03-02 THR A:24 A:24 38.0 0.271 H -74.9 -34.0 38.0 0.271 0.0 HOH
 7.051
 CG2
 O
THR B:24 B:224 39.0 0.279 H -72.7 -33.5 39.0 0.279 0.0 HOH
 7.977
 N
 O
2qrz 1 P60953 100.0 4e-140 X-RAY
 2008-03-18 THR A:24 A:24 36.0 0.257 H -76.2 -23.6 36.0 0.257 0.0 HOH
 2.654
 O
 O
THR B:24 B:24 39.0 0.279 H -76.6 -31.0 39.0 0.279 0.0 HOH
 4.012
 O
 O
2wm9 2 P60953 100.0 1e-139 X-RAY
 2009-09-22 THR B:26 B:24 26.0 0.186 H -77.2 -27.8 26.0 0.186 0.0 HOH
 2.713
 O
 O
2wmn 2 P60953 100.0 1e-139 X-RAY
 2009-09-22 THR B:26 B:24 26.0 0.186 H -79.6 -24.5 26.0 0.186 0.0 HOH
 5.132
 N
 O
2wmo 2 P60953 100.0 1e-139 X-RAY
 2009-09-22 THR B:26 B:24 32.0 0.229 H -77.6 -27.5 32.0 0.229 0.0 HOH
 4.086
 O
 O
1nf3 1 P60953 98.95 1e-139 X-RAY
 2003-03-04 THR A:28 A:24 43.0 0.307 H -77.3 -33.5 16.0 0.114 0.193 C:Q9JK83:0.193
 HOH
 4.851
 O
 O
THR B:28 B:24 40.0 0.286 H -77.7 -31.4 NA NA NA
1doa 1 P60953 100.0 1e-139 X-RAY
 2000-02-09 THR A:27 A:24 34.0 0.243 H -92.8 -10.8 34.0 0.243 0.0 HOH
 3.736
 OG1
 O
6tky 2 P60953 100.0 2e-139 X-RAY
 2020-01-22 THR B:24 C:24 29.0 0.207 H -75.6 -26.4 NA NA NA
THR C:24 D:24 34.0 0.243 H -72.3 -39.8 34.0 0.243 0.0 HOH
 5.601
 N
 O
6tkz 2 P60953 100.0 2e-139 X-RAY
 2020-01-22 THR B:24 C:24 33.0 0.236 H -72.8 -48.8 NA NA NA
THR C:24 D:24 29.0 0.207 H -78.7 -33.7 29.0 0.207 0.0 HOH
 5.416
 N
 O
6aj4 2 P60953 100.0 1e-138 X-RAY
 2019-03-20 THR B:31 B:24 24.0 0.171 H -67.4 -11.3 18.0 0.129 0.042 A:Q96N67:0.043
THR D:31 D:24 27.0 0.193 H -68.6 -15.3 NA NA NA
THR F:31 F:24 25.0 0.179 T -71.2 -16.2 NA NA NA
THR H:31 H:24 20.0 0.143 H -83.7 1.2 NA NA NA
6ajl 2 P60953 100.0 1e-138 X-RAY
 2019-03-20 THR B:31 B:24 24.0 0.171 H -69.5 -27.3 20.0 0.143 0.028 A:Q96N67:0.029
THR D:31 D:24 28.0 0.2 H -71.2 -11.3 NA NA NA
THR F:31 F:24 21.0 0.15 H -65.3 -21.9 NA NA NA
THR H:31 H:24 23.0 0.164 H -73.4 -9.0 NA NA NA
1ki1 1 P60953 100.0 1e-138 X-RAY
 2002-05-29 THR A:24 A:24 28.0 0.2 H -78.3 -27.6 28.0 0.2 0.0 HOH
 3.035
 OG1
 O
THR C:24 C:24 26.0 0.186 H -78.1 -27.7 NA NA NA
1kz7 2 P60953 100.0 1e-138 X-RAY
 2002-03-20 THR B:24 B:24 21.0 0.15 H -85.3 -25.5 21.0 0.15 0.0 HOH
 2.916
 OG1
 O
THR D:24 D:1024 31.0 0.221 H -73.8 -27.7 NA NA NA
1kzg 2 P60953 100.0 1e-138 X-RAY
 2002-03-20 THR B:24 B:24 23.0 0.164 H -85.0 -28.0 23.0 0.164 0.0 HOH
 3.848
 O
 O
THR D:24 D:1024 24.0 0.171 H -81.4 -25.8 NA NA NA
3vhl 2 P60953 99.47 6e-138 X-RAY
 2012-06-20 THR B:31 B:24 25.0 0.179 H -68.4 -23.8 20.0 0.143 0.036 A:Q8C147:0.036
 HOH
 2.873
 O
 O
4did 1 P60953 100.0 2e-135 X-RAY
 2012-02-29 THR A:34 A:24 25.0 0.179 H -76.9 -31.4 11.0 0.079 0.1 B:O30916:0.1
 HOH
 2.660
 OG1
 O
1e0a 1 P60953 99.46 1e-134 NMR
 2000-04-18 THR A:24 A:24 46.0 0.329 I -123.9 -86.2 13.0 0.093 0.236 B:P35465:0.236
 GNP
 5.742
 H
 HN22
5hzk 1 P60953 96.79 3e-134 X-RAY
 2016-12-21 THR A:26 A:24 26.0 0.186 H -79.6 -34.7 26.0 0.186 0.0
THR C:26 C:24 20.0 0.143 H -81.4 -36.4 NA NA NA
4yc7 2 P60953 99.44 1e-131 X-RAY
 2015-05-13 THR B:26 A:23 50.0 0.357 H -71.3 -38.9 50.0 0.357 0.0
4ydh 2 P60953 99.44 1e-131 X-RAY
 2015-05-13 THR B:26 B:24 50.0 0.357 H -68.5 -42.2 50.0 0.357 0.0
THR D:26 D:24 50.0 0.357 H -72.7 -43.4 50.0 0.357 0.0
1gzs 1 P25763 100.0 3e-131 X-RAY
 2002-09-12 THR A:26 A:24 35.0 0.25 H -83.6 -19.9 35.0 0.25 0.0 HOH
 5.194
 OG1
 O
THR C:26 C:24 33.0 0.236 H -93.8 -11.1 NA NA NA
3eg5 1 P60766 99.44 6e-131 X-RAY
 2008-10-14 THR A:24 A:24 46.0 0.329 H -92.2 -18.2 46.0 0.329 0.0
THR C:24 C:24 43.0 0.307 H -92.6 -17.8 43.0 0.307 0.0
5upl 2 P60953 100.0 1e-130 X-RAY
 2017-12-27 THR B:24 B:24 39.0 0.279 H -55.2 -48.8 39.0 0.279 0.0
3gcg 1 P60953 100.0 6e-130 X-RAY
 2009-07-21 THR A:28 A:24 18.0 0.129 H -79.1 -5.3 18.0 0.129 0.0 HOH
 3.217
 OG1
 O
4js0 1 P60953 99.44 6e-130 X-RAY
 2014-03-05 THR A:24 A:24 33.0 0.236 H -79.5 -24.0 13.0 0.093 0.143 B:Q9UQB8:0.143
 PE4
HOH
 3.501
3.233
 O
OG1
 C6
O
3qbv 1 P60953 99.44 6e-130 X-RAY
 2012-02-08 THR A:24 A:24 34.0 0.243 H -99.1 6.2 34.0 0.243 0.0 HOH
 9.020
 CG2
 O
THR C:24 C:24 33.0 0.236 H -99.9 6.3 NA NA NA
5cjp 1 A0A024RAE4 99.44 3e-129 X-RAY
 2016-08-10 THR A:26 A:24 37.0 0.264 H -86.5 -19.0 34.0 0.243 0.021 E:Q13576:0.021
 HOH
 4.261
 CA
 O
THR B:26 B:24 39.0 0.279 H -95.2 -13.0 39.0 0.279 0.0 HOH
 5.075
 O
 O
THR C:26 C:24 36.0 0.257 H -84.1 -18.9 31.0 0.221 0.036 E:Q13576:0.036
 HOH
 4.037
 O
 O
THR D:26 D:24 37.0 0.264 H -84.6 -17.5 32.0 0.229 0.035 F:Q13576:0.036
5upk 3 P60953 98.87 4e-129 X-RAY
 2017-12-27 THR C:24 C:24 37.0 0.264 H -76.4 -34.2 15.0 0.107 0.157 A:O96013:0.157
1am4 2 P60953 99.43 7e-129 X-RAY
 1998-07-15 THR B:24 D:524 53.0 0.379 H -80.4 -53.4 53.0 0.379 0.0 HOH
 5.026
 CG2
 O
THR D:24 E:524 54.0 0.386 H -81.2 -53.1 NA NA NA
THR F:24 F:524 55.0 0.393 H -80.5 -53.1 NA NA NA
7s0y 2 P60953 99.43 8e-129 X-RAY
 2021-09-08 THR B:25 B:24 45.0 0.321 H -90.0 -18.1 23.0 0.164 0.157 A:P18177:0.157
 SO4
HOH
 8.146
5.405
 O
O
 O4
O
5hzh 1 P63000,O49003 81.25 5e-21 X-RAY
 2016-12-21 THR A:27 A:24 44.0 0.314 H -100.0 -27.2 44.0 0.314 0.0 HOH
 8.432
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p60953-f1 1 P60953 100.0 8e-142 THR A:24 A:24 36.0 0.257 H -80.5 -29.0