Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 7995151 . C A CCDS92.1:NM_001561.5:c.466Gtg>Ttg_NP_001552.2:p.156V>L Homo sapiens TNF receptor superfamily member 9 (TNFRSF9), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6a3v 2 Q07011 98.75 7e-113 X-RAY
 2018-10-10 VAL B:133 B:156 10.0 0.065 -59.4 130.6 10.0 0.065 0.0 NAG
 6.620
 CG2
 C1
VAL D:133 D:156 8.0 0.052 -71.4 136.5 NA NA NA
VAL F:133 F:156 12.0 0.077 -71.8 142.4 NA NA NA
VAL H:133 H:156 15.0 0.097 -69.1 137.7 NA NA NA
VAL J:133 J:156 10.0 0.065 -69.4 135.5 NA NA NA
VAL L:133 L:156 12.0 0.077 -63.3 126.7 NA NA NA
VAL N:133 N:156 8.0 0.052 -60.6 134.4 NA NA NA
VAL P:133 P:156 8.0 0.052 -65.3 128.9 NA NA NA
VAL R:133 R:156 12.0 0.077 -69.6 140.6 NA NA NA
VAL T:133 T:156 14.0 0.09 -67.1 135.7 NA NA NA
VAL V:133 V:156 8.0 0.052 -62.0 133.6 NA NA NA
VAL X:133 X:156 11.0 0.071 -63.4 127.2 NA NA NA
6a3w 3 Q07011 98.75 7e-113 X-RAY
 2018-10-10 VAL C:133 C:156 16.0 0.103 -61.8 140.3 16.0 0.103 0.0 HOH
 2.369
 O
 O
VAL F:133 F:156 17.0 0.11 -62.8 140.8 NA NA NA
VAL I:133 I:156 19.0 0.123 -64.8 155.9 NA NA NA
VAL L:133 L:156 19.0 0.123 -64.4 143.4 NA NA NA
6mgp 2 Q07011 98.58 3e-98 X-RAY
 2018-11-14 VAL D:132 X:156 14.0 0.09 -61.8 155.9 14.0 0.09 0.0 NAG
FUC
HOH
 6.459
9.983
9.703
 CG1
CG1
N
 C1
C5
O
VAL E:132 Y:156 12.0 0.077 -64.5 157.1 12.0 0.077 0.0 NAG
FUC
HOH
 6.397
9.751
4.025
 CG1
CG1
O
 C1
O2
O
VAL F:132 Z:156 12.0 0.077 -63.2 160.1 12.0 0.077 0.0 NAG
FUC
HOH
 6.373
8.827
6.683
 CG1
CG1
CG2
 C1
C6
O
6mhr 3 Q07011 98.58 3e-98 X-RAY
 2018-11-21 VAL E:132 F:156 14.0 0.09 -66.8 133.7 14.0 0.09 0.0 NAG
FUC
EPE
 8.312
6.201
5.016
 CG1
CG1
CG1
 C1
C4
O1S
VAL F:132 C:156 15.0 0.097 -61.5 137.7 NA NA NA
6mi2 3 Q07011 98.58 4e-98 X-RAY
 2018-11-21 VAL E:132 F:156 15.0 0.097 -60.8 138.0 NA NA NA
VAL F:132 C:156 20.0 0.129 -79.8 165.2 20.0 0.129 0.0 NAG
HOH
 8.538
4.671
 CG1
O
 C1
O
6cpr 2 Q07011 100.0 3e-97 X-RAY
 2018-05-09 VAL D:134 D:156 17.0 NA -69.4 135.3 17.0 NA NA NAG
HOH
 9.072
9.035
 CB
O
 C1
O
VAL E:134 F:156 20.0 0.129 -67.9 147.9 20.0 0.129 0.0 NAG
HOH
 8.167
9.121
 CG1
CG1
 C1
O
VAL F:134 E:156 22.0 0.142 -68.7 147.3 22.0 0.142 0.0 NAG
HOH
 8.289
6.969
 CG1
CG1
 C1
O
7d4b 1 Q07011 100.0 3e-97 X-RAY
 2021-07-14 VAL A:132 A:156 22.0 0.142 -73.0 155.1 11.0 0.071 0.071 B:None:0.071
 NAG
NAG
FUC
 6.382
7.762
7.749
 CG2
CG2
CG2
 C8
O5
C6
6cu0 2 Q07011 99.28 4e-96 X-RAY
 2018-05-09 VAL G:134 G:156 14.0 NA -64.6 141.2 14.0 NA NA NAG
HOH
 7.959
4.262
 CB
O
 C1
O
VAL H:134 H:156 12.0 NA -65.9 139.6 NA NA NA
VAL I:134 J:156 18.0 NA -65.8 142.2 NA NA NA
VAL J:134 NA:NA DO NA DO DO DO NA NA NA
VAL K:134 L:156 12.0 NA -64.6 139.8 NA NA NA
VAL L:134 I:156 12.0 NA -65.5 139.5 12.0 NA NA
6bwv 2 Q07011 97.81 4e-94 X-RAY
 2018-05-09 VAL C:133 D:156 13.0 0.084 -59.1 147.6 NA NA NA
VAL D:133 E:156 14.0 0.09 -56.9 146.2 14.0 0.09 0.0 PEG
HOH
 7.723
9.783
 CG1
N
 C4
O
6y8k 1 Q07011 90.2 5e-94 X-RAY
 2021-02-03 VAL A:153 AAA:156 12.0 0.077 -59.9 166.6 12.0 0.077 0.0 SO4
HOH
 8.980
2.847
 HG11
HG11
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q07011-f1 1 Q07011 100.0 0.0 VAL A:156 A:156 17.0 0.11 -65.5 148.7