Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 949502 . C A CCDS6.1:NM_005101.3:c.142Cac>Aac_NP_005092.1:p.48H>N Homo sapiens ISG15 ubiquitin-like modifier (ISG15), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3r66 2 P05161 100.0 6e-113 X-RAY
 2011-06-08 HIS C:55 C:48 79.0 0.405 T -104.5 143.6 42.0 0.215 0.19 A:P03502:0.19
 HOH
 2.626
 O
 O
HIS D:55 D:48 77.0 0.395 T -103.6 142.9 77.0 0.395 0.0 HOH
 3.610
 O
 O
3sdl 2 P05161 100.0 6e-113 X-RAY
 2011-07-20 HIS C:55 C:48 72.0 0.369 T -111.6 139.7 50.0 0.256 0.113 A:P03502:0.113
 HOH
 2.884
 O
 O
HIS D:55 D:48 85.0 0.436 T -108.7 134.8 85.0 0.436 0.0 HOH
 3.378
 O
 O
7rbs 2 P05161 100.0 3e-112 X-RAY
 2021-09-29 HIS B:50 B:48 68.0 0.349 E -116.1 134.1 68.0 0.349 0.0
HIS D:50 D:48 64.0 0.328 E -114.1 140.6 NA NA NA
HIS F:50 F:48 66.0 0.338 E -84.3 137.3 NA NA NA
HIS H:50 H:48 66.0 0.338 E -122.9 127.1 NA NA NA
HIS J:50 J:48 64.0 0.328 E -120.4 127.3 NA NA NA
7s6p 1 P05161 100.0 3e-112 X-RAY
 2021-09-22 HIS A:50 A:48 75.0 0.385 T -90.6 134.3 75.0 0.385 0.0 HOH
 5.418
 CD2
 O
HIS B:50 B:48 76.0 0.39 T -89.4 134.0 NA NA NA
HIS C:50 C:48 74.0 0.379 E -90.4 132.9 NA NA NA
HIS D:50 D:48 71.0 0.364 T -91.2 133.1 NA NA NA
HIS E:50 E:48 74.0 0.379 T -89.7 133.0 NA NA NA
HIS F:50 F:48 79.0 0.405 E -91.0 133.3 NA NA NA
3rt3 1 P05161 99.37 4e-112 X-RAY
 2011-07-13 HIS A:48 B:48 71.0 0.364 E -95.8 137.0 47.0 0.241 0.123 B:P03502:0.123
 HOH
 6.165
 O
 O
6bi8 2 P05161 99.36 9e-111 X-RAY
 2018-11-07 HIS C:48 C:48 86.0 0.441 S -76.9 128.4 86.0 0.441 0.0
HIS D:48 D:48 91.0 0.467 T -101.6 133.7 NA NA NA
3pse 2 P05161 98.72 3e-110 X-RAY
 2011-01-19 HIS B:48 B:48 100.0 0.513 E -106.6 135.3 100.0 0.513 0.0
1z2m 1 P05161 99.35 4e-110 X-RAY
 2005-05-24 HIS A:48 A:48 79.0 0.405 E -114.2 131.7 79.0 0.405 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05161-f1 1 P05161 100.0 2e-119 HIS A:48 A:48 87.0 0.446 T -92.3 140.5