Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 10035699 . C A CCDS108.1:NM_022787.3:c.165taC>taA_NP_073624.2:p.55Y>* Homo sapiens nicotinamide nucleotide adenylyltransferase 1 (NMNAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1kqn 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-07 TYR A:55 A:55 50.0 0.217 G -60.3 -35.5 50.0 0.217 0.0 NAD
XE
HOH
 3.333
9.563
2.546
 OH
N
OH
 C6N
XE
O
TYR B:55 B:55 47.0 0.204 G -61.9 -35.1 47.0 0.204 0.0 NAD
HOH
 3.187
2.805
 OH
OH
 C6N
O
TYR C:55 C:55 48.0 0.209 G -59.0 -32.7 48.0 0.209 0.0 NAD
XE
HOH
 3.423
9.285
2.516
 OH
N
OH
 C6N
XE
O
TYR D:55 D:55 46.0 0.2 G -62.5 -29.1 46.0 0.2 0.0 NAD
HOH
 3.251
2.757
 OH
OH
 C6N
O
TYR E:55 E:55 49.0 0.213 G -61.3 -36.3 49.0 0.213 0.0 NAD
HOH
 3.450
2.584
 OH
OH
 C6N
O
TYR F:55 F:55 46.0 0.2 G -60.6 -40.9 46.0 0.2 0.0 NAD
HOH
 3.478
2.447
 OH
OH
 C6N
O
1kqo 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-07 TYR A:55 A:55 47.0 0.204 G -59.4 -39.5 47.0 0.204 0.0 DND
HOH
 3.368
2.782
 OH
OH
 C6N
O
TYR B:55 B:55 47.0 0.204 G -69.3 -36.9 47.0 0.204 0.0 DND
HOH
 3.431
2.790
 OH
OH
 C6N
O
TYR C:55 C:55 46.0 0.2 G -56.3 -39.8 46.0 0.2 0.0 DND
HOH
 3.437
2.486
 OH
OH
 C6N
O
TYR D:55 D:55 47.0 0.204 G -65.1 -33.1 47.0 0.204 0.0 DND
HOH
 3.331
3.057
 OH
OH
 C6N
O
TYR E:55 E:55 47.0 0.204 G -62.1 -36.9 47.0 0.204 0.0 DND
HOH
 3.533
2.991
 OH
OH
 C6N
O
TYR F:55 F:55 44.0 0.191 G -70.1 -25.8 44.0 0.191 0.0 DND
HOH
 3.663
4.528
 OH
OH
 C6N
O
1kr2 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-08 TYR A:55 A:55 50.0 0.217 G -67.8 -29.2 50.0 0.217 0.0 TAD
HOH
 3.538
2.532
 CE1
OH
 C2D
O
TYR B:55 B:55 48.0 0.209 G -59.5 -31.6 48.0 0.209 0.0 TAD
HOH
 3.643
2.544
 OH
OH
 C3D
O
TYR C:55 C:55 44.0 0.191 G -60.4 -31.2 44.0 0.191 0.0 TAD
HOH
 3.720
2.602
 CZ
OH
 C2D
O
TYR D:55 D:55 47.0 0.204 G -70.7 -29.1 47.0 0.204 0.0 TAD
HOH
 3.602
2.721
 CE1
OH
 C2D
O
TYR E:55 E:55 45.0 0.196 G -65.7 -39.0 45.0 0.196 0.0 TAD
HOH
 3.673
2.927
 OH
OH
 S1N
O
TYR F:55 F:55 46.0 0.2 G -58.6 -33.7 46.0 0.2 0.0 TAD
HOH
 3.677
2.538
 OH
OH
 S1N
O
1kku 1 Q9HAN9 99.64 0.0 X-RAY
 2002-06-10 TYR A:55 A:55 97.0 0.422 S -71.8 109.5 97.0 0.422 0.0 HOH
 3.488
 O
 O
1gzu 1 Q9HAN9 100.0 0.0 X-RAY
 2002-07-05 TYR A:66 A:55 50.0 0.217 G -50.3 -32.6 50.0 0.217 0.0 NMN
 3.664
 OH
 O2P
TYR B:66 B:55 53.0 0.23 G -52.8 -33.6 53.0 0.23 0.0 NMN
 3.114
 OH
 C6
TYR C:66 C:55 51.0 0.222 G -51.3 -33.0 51.0 0.222 0.0 NMN
 3.274
 OH
 C5R

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9han9-f1 1 Q9HAN9 100.0 0.0 TYR A:55 A:55 40.0 0.174 G -68.1 -26.2