Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 10042377 . T A CCDS108.1:NM_022787.3:c.458cTg>cAg_NP_073624.2:p.153L>Q Homo sapiens nicotinamide nucleotide adenylyltransferase 1 (NMNAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1kqn 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-07 LEU A:153 A:153 0.0 0.0 E -78.0 126.6 0.0 0.0 0.0 NAD
HOH
 6.807
7.470
 CG
CD1
 O3B
O
LEU B:153 B:153 1.0 0.006 E -76.8 129.5 1.0 0.006 0.0 NAD
XE
HOH
 6.701
8.459
4.471
 CD1
C
CD1
 O3B
XE
O
LEU C:153 C:153 0.0 0.0 E -74.1 121.7 0.0 0.0 0.0 NAD
HOH
 6.505
7.314
 CD1
N
 O3B
O
LEU D:153 D:153 0.0 0.0 E -81.6 131.2 0.0 0.0 0.0 NAD
XE
HOH
 6.715
8.435
3.518
 CG
C
CD1
 O3B
XE
O
LEU E:153 E:153 0.0 0.0 E -81.1 128.6 0.0 0.0 0.0 NAD
XE
HOH
 6.640
8.744
7.570
 CD1
CD1
CD2
 O3B
XE
O
LEU F:153 F:153 0.0 0.0 E -75.6 121.4 0.0 0.0 0.0 NAD
HOH
 6.504
7.509
 CD1
CD2
 O3B
O
1kqo 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-07 LEU A:153 A:153 0.0 0.0 E -76.3 121.7 0.0 0.0 0.0 DND
HOH
 6.600
4.392
 CG
CD1
 O3B
O
LEU B:153 B:153 0.0 0.0 E -84.4 133.1 0.0 0.0 0.0 DND
HOH
 6.638
7.360
 CD1
CD1
 O3B
O
LEU C:153 C:153 0.0 0.0 E -72.2 127.2 0.0 0.0 0.0 DND
HOH
 6.561
4.771
 CG
CD1
 O3B
O
LEU D:153 D:153 1.0 0.006 E -74.1 133.8 1.0 0.006 0.0 DND
HOH
 6.311
7.565
 CD1
CD2
 O3B
O
LEU E:153 E:153 0.0 0.0 E -79.6 129.3 0.0 0.0 0.0 DND
HOH
 6.647
7.399
 CD1
CD2
 O3B
O
LEU F:153 F:153 2.0 0.012 E -85.9 117.1 2.0 0.012 0.0 DND
HOH
 6.962
7.380
 CG
CD1
 O3B
O
1kr2 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-08 LEU A:153 A:153 2.0 0.012 E -77.6 123.9 2.0 0.012 0.0 TAD
HOH
 6.708
4.192
 CG
CD1
 O3B
O
LEU B:153 B:153 2.0 0.012 E -77.1 132.5 2.0 0.012 0.0 TAD
HOH
 6.500
3.648
 CD1
CD1
 O3B
O
LEU C:153 C:153 2.0 0.012 E -79.5 124.1 2.0 0.012 0.0 TAD
HOH
 6.722
2.624
 CG
CD1
 O3B
O
LEU D:153 D:153 2.0 0.012 E -74.1 134.7 2.0 0.012 0.0 TAD
HOH
 6.865
3.504
 CG
CD1
 O3B
O
LEU E:153 E:153 0.0 0.0 E -74.2 127.6 0.0 0.0 0.0 TAD
HOH
 6.446
3.691
 CD1
CD1
 O3B
O
LEU F:153 F:153 3.0 0.018 E -76.1 120.9 3.0 0.018 0.0 TAD
HOH
 6.715
6.924
 CG
CD1
 O3B
O
1kku 1 Q9HAN9 99.64 0.0 X-RAY
 2002-06-10 LEU A:153 A:153 10.0 0.059 E -82.4 127.3 10.0 0.059 0.0 HOH
 3.607
 CD1
 O
1gzu 1 Q9HAN9 100.0 0.0 X-RAY
 2002-07-05 LEU A:164 A:153 4.0 0.024 E -73.7 121.2 4.0 0.024 0.0 NMN
 7.077
 CD2
 O4R
LEU B:164 B:153 4.0 0.024 E -77.4 116.8 4.0 0.024 0.0 NMN
 6.619
 CD2
 O4R
LEU C:164 C:153 4.0 0.024 E -70.3 119.7 4.0 0.024 0.0 NMN
 7.582
 CD2
 O7

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9han9-f1 1 Q9HAN9 100.0 0.0 LEU A:153 A:153 0.0 0.0 E -77.4 124.0