Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 10042636 | . | G | A | CCDS108.1:NM_022787.3:c.717ttG>ttA_NP_073624.2:p.239L>L | Homo sapiens nicotinamide nucleotide adenylyltransferase 1 (NMNAT1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1kqn | 1 | Q9HAN9 | 100.0 | 0.0 |
X-RAY |
2003-01-07 | LEU | A:239 | A:239 | 65.0 | 0.382 | T | -103.4 | -20.8 | 2.0 | 0.012 | 0.37 |
B:Q9HAN9:0.371 |
XE HOH |
7.497 3.449 |
CD2 CD2 |
XE O |
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LEU | B:239 | B:239 | 64.0 | 0.376 | T | -105.7 | -23.4 | 4.0 | 0.024 | 0.352 |
A:Q9HAN9:0.353 |
XE HOH |
7.898 4.108 |
CD2 CD2 |
XE O |
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LEU | C:239 | C:239 | 65.0 | 0.382 | T | -104.7 | -27.1 | 1.0 | 0.006 | 0.376 |
D:Q9HAN9:0.376 |
XE HOH |
7.400 3.884 |
CD2 CD2 |
XE O |
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LEU | D:239 | D:239 | 62.0 | 0.365 | T | -108.4 | -20.6 | 1.0 | 0.006 | 0.359 |
C:Q9HAN9:0.359 |
XE HOH |
7.678 3.647 |
CD2 CD2 |
XE O |
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LEU | E:239 | E:239 | 58.0 | 0.341 | T | -115.2 | -21.1 | 0.0 | 0.0 | 0.341 |
F:Q9HAN9:0.341 |
XE HOH |
7.565 3.628 |
CD2 CD2 |
XE O |
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LEU | F:239 | F:239 | 67.0 | 0.394 | T | -106.8 | -25.2 | 4.0 | 0.024 | 0.37 |
E:Q9HAN9:0.371 |
XE HOH |
7.284 4.234 |
CD2 CD2 |
XE O |
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1kqo | 1 | Q9HAN9 | 100.0 | 0.0 |
X-RAY |
2003-01-07 | LEU | A:239 | A:239 | 66.0 | 0.388 | T | -107.2 | -20.7 | 1.0 | 0.006 | 0.382 |
B:Q9HAN9:0.382 |
HOH |
4.306 |
CG |
O |
|
LEU | B:239 | B:239 | 60.0 | 0.353 | T | -111.2 | -28.0 | 2.0 | 0.012 | 0.341 |
A:Q9HAN9:0.341 |
HOH |
4.379 |
CD2 |
O |
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LEU | C:239 | C:239 | 63.0 | 0.371 | T | -111.6 | -18.9 | 1.0 | 0.006 | 0.365 |
D:Q9HAN9:0.365 |
HOH |
4.269 |
N |
O |
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LEU | D:239 | D:239 | 59.0 | 0.347 | T | -112.5 | -27.1 | 1.0 | 0.006 | 0.341 |
C:Q9HAN9:0.341 |
HOH |
3.879 |
CD2 |
O |
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LEU | E:239 | E:239 | 61.0 | 0.359 | T | -114.5 | -19.8 | 2.0 | 0.012 | 0.347 |
F:Q9HAN9:0.347 |
HOH |
3.457 |
CD2 |
O |
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LEU | F:239 | F:239 | 64.0 | 0.376 | T | -113.1 | -18.8 | 4.0 | 0.024 | 0.352 |
E:Q9HAN9:0.353 |
HOH |
4.098 |
CD2 |
O |
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1kr2 | 1 | Q9HAN9 | 100.0 | 0.0 |
X-RAY |
2003-01-08 | LEU | A:239 | A:239 | 67.0 | 0.394 | T | -108.8 | -17.2 | 0.0 | 0.0 | 0.394 |
B:Q9HAN9:0.394 |
HOH |
3.566 |
CD2 |
O |
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LEU | B:239 | B:239 | 59.0 | 0.347 | T | -107.3 | -24.1 | 0.0 | 0.0 | 0.347 |
A:Q9HAN9:0.347 |
HOH |
3.973 |
CD2 |
O |
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LEU | C:239 | C:239 | 64.0 | 0.376 | T | -104.0 | -21.4 | 2.0 | 0.012 | 0.364 |
D:Q9HAN9:0.365 |
TAD HOH |
9.606 3.682 |
O CD2 |
N6A O |
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LEU | D:239 | D:239 | 59.0 | 0.347 | T | -113.6 | -19.5 | 1.0 | 0.006 | 0.341 |
C:Q9HAN9:0.341 |
HOH |
3.675 |
CD2 |
O |
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LEU | E:239 | E:239 | 64.0 | 0.376 | T | -113.2 | -22.9 | 2.0 | 0.012 | 0.364 |
F:Q9HAN9:0.365 |
HOH |
3.719 |
CD2 |
O |
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LEU | F:239 | F:239 | 65.0 | 0.382 | T | -112.1 | -19.8 | 0.0 | 0.0 | 0.382 |
E:Q9HAN9:0.382 |
HOH |
3.751 |
CD2 |
O |
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1kku | 1 | Q9HAN9 | 99.64 | 0.0 |
X-RAY |
2002-06-10 | LEU | A:239 | A:239 | 68.0 | 0.4 | T | -104.8 | -14.0 | 68.0 | 0.4 | 0.0 |
HOH |
4.173 |
N |
O |
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1gzu | 1 | Q9HAN9 | 100.0 | 0.0 |
X-RAY |
2002-07-05 | LEU | A:250 | A:239 | 63.0 | 0.371 | T | -99.7 | -25.9 | 5.0 | 0.029 | 0.342 |
B:Q9HAN9:0.341 |
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LEU | B:250 | B:239 | 65.0 | 0.382 | T | -101.8 | -23.3 | 6.0 | 0.035 | 0.347 |
A:Q9HAN9:0.347 |
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LEU | C:250 | C:239 | 65.0 | 0.382 | T | -98.1 | -18.2 | 3.0 | 0.018 | 0.364 |
C:Q9HAN9:0.365 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9han9-f1 | 1 | Q9HAN9 | 100.0 | 0.0 | LEU | A:239 | A:239 | 63.0 | 0.371 | T | -95.8 | -22.7 |