Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 10042680 . A C CCDS108.1:NM_022787.3:c.761tAc>tCc_NP_073624.2:p.254Y>S Homo sapiens nicotinamide nucleotide adenylyltransferase 1 (NMNAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1kqn 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-07 TYR A:254 A:254 13.0 0.057 -114.8 130.8 13.0 0.057 0.0 NAD
HOH
 9.298
2.541
 OH
N
 O1A
O
TYR B:254 B:254 16.0 0.07 -114.2 135.0 16.0 0.07 0.0 NAD
HOH
 9.161
2.304
 OH
N
 O1A
O
TYR C:254 C:254 12.0 0.052 -108.7 123.2 12.0 0.052 0.0 NAD
HOH
 9.231
2.826
 OH
N
 O1A
O
TYR D:254 D:254 14.0 0.061 -115.1 136.5 14.0 0.061 0.0 NAD
HOH
 9.102
3.522
 OH
CD2
 O1A
O
TYR E:254 E:254 14.0 0.061 -104.3 140.8 14.0 0.061 0.0 NAD
HOH
 9.318
2.437
 OH
N
 O1A
O
TYR F:254 F:254 11.0 0.048 -104.8 138.5 11.0 0.048 0.0 NAD
HOH
 9.247
2.825
 OH
N
 O1A
O
1kqo 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-07 TYR A:254 A:254 12.0 0.052 -114.9 135.8 12.0 0.052 0.0 DND
HOH
 9.310
3.732
 OH
CD2
 O13
O
TYR B:254 B:254 11.0 0.048 65.6 114.4 11.0 0.048 0.0 DND
HOH
 9.053
3.460
 OH
CD2
 O13
O
TYR C:254 C:254 6.0 0.026 -113.8 125.7 6.0 0.026 0.0 DND
HOH
 9.272
2.473
 OH
CE1
 O13
O
TYR D:254 D:254 15.0 0.065 -107.6 131.8 15.0 0.065 0.0 DND
HOH
 9.068
2.535
 OH
N
 O13
O
TYR E:254 E:254 11.0 0.048 -96.0 132.4 11.0 0.048 0.0 DND
HOH
 9.146
3.434
 OH
CD2
 O13
O
TYR F:254 F:254 12.0 0.052 -105.7 129.0 12.0 0.052 0.0 DND
HOH
 9.387
2.855
 OH
N
 O13
O
1kr2 1 Q9HAN9 100.0 0.0 X-RAY
 2003-01-08 TYR A:254 A:254 12.0 0.052 -116.3 131.6 12.0 0.052 0.0 TAD
HOH
 9.776
2.774
 OH
N
 O1A
O
TYR B:254 B:254 14.0 0.061 -108.7 139.6 14.0 0.061 0.0 TAD
HOH
 9.706
3.389
 OH
CD2
 O1A
O
TYR C:254 C:254 13.0 0.057 -108.6 127.8 13.0 0.057 0.0 TAD
HOH
 9.662
2.946
 OH
O
 O1A
O
TYR D:254 D:254 15.0 0.065 -110.7 137.3 15.0 0.065 0.0 TAD
HOH
 9.331
3.414
 OH
CD2
 O1A
O
TYR E:254 E:254 8.0 0.035 -102.2 137.1 8.0 0.035 0.0 TAD
HOH
 9.783
2.220
 OH
N
 O1A
O
TYR F:254 F:254 11.0 0.048 -105.1 138.6 11.0 0.048 0.0 TAD
HOH
 9.929
3.445
 OH
CD2
 O1A
O
1kku 1 Q9HAN9 99.64 0.0 X-RAY
 2002-06-10 TYR A:254 A:254 26.0 0.113 T 63.3 6.5 26.0 0.113 0.0 HOH
 2.997
 N
 O
1gzu 1 Q9HAN9 100.0 0.0 X-RAY
 2002-07-05 TYR A:265 A:254 8.0 0.035 -108.4 126.9 8.0 0.035 0.0
TYR B:265 B:254 17.0 0.074 -110.3 129.8 17.0 0.074 0.0
TYR C:265 C:254 15.0 0.065 -107.1 124.9 15.0 0.065 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9han9-f1 1 Q9HAN9 100.0 0.0 TYR A:254 A:254 4.0 0.017 S 70.6 32.8