Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 100661905 | . | T | A | CCDS767.1:NM_001918.3:c.1355cAc>cTc_NP_001909.3:p.452H>L | Homo sapiens dihydrolipoamide branched chain transacylase E2 (DBT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2ihw | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | HIS | A:232 | A:391 | 79.0 | 0.405 | T | -69.2 | -1.6 | 8.0 | 0.041 | 0.364 |
C:P11181:0.364 |
ACT ACT CL HOH |
4.384 3.013 7.833 8.404 |
NE2 NE2 CB N |
C CH3 CL O |
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HIS | B:232 | B:391 | 83.0 | 0.426 | T | -78.9 | -5.9 | 10.0 | 0.051 | 0.375 |
A:P11181:0.374 |
ACT ACT CL HOH |
3.855 2.479 7.894 6.720 |
NE2 NE2 CB ND1 |
CH3 O CL O |
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HIS | C:232 | C:391 | 83.0 | 0.426 | T | -68.5 | -7.7 | 10.0 | 0.051 | 0.375 |
B:P11181:0.374 |
ACT ACT CL HOH |
4.094 3.013 8.045 5.612 |
NE2 NE2 CB O |
CH3 CH3 CL O |
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HIS | D:232 | D:391 | 81.0 | 0.415 | T | -68.4 | -4.2 | 13.0 | 0.067 | 0.348 |
F:P11181:0.349 |
ACT ACT CL HOH |
4.148 2.575 8.008 7.576 |
NE2 NE2 CB N |
CH3 OXT CL O |
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HIS | E:232 | E:391 | 84.0 | 0.431 | T | -66.0 | -0.6 | 11.0 | 0.056 | 0.375 |
D:P11181:0.374 |
ACT ACT CL HOH |
4.341 2.766 7.918 7.620 |
NE2 CE1 CB O |
CH3 OXT CL O |
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HIS | F:232 | F:391 | 82.0 | 0.421 | T | -54.1 | -9.1 | 10.0 | 0.051 | 0.37 |
E:P11181:0.369 |
ACT ACT CL HOH |
3.965 2.506 7.915 7.225 |
NE2 NE2 CB N |
CH3 OXT CL O |
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HIS | G:232 | G:391 | 83.0 | 0.426 | T | -62.2 | -7.6 | 10.0 | 0.051 | 0.375 |
G:P11181:0.374 |
ACT ACT CL HOH |
4.576 2.977 8.164 7.701 |
NE2 NE2 CB N |
OXT O CL O |
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HIS | H:232 | H:391 | 82.0 | 0.421 | T | -71.6 | -1.7 | 10.0 | 0.051 | 0.37 |
H:P11181:0.369 |
CL ACT ACT HOH |
7.933 4.231 2.596 6.757 |
CB NE2 CE1 CE1 |
CL CH3 OXT O |
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2ii3 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | HIS | A:232 | A:391 | 82.0 | 0.421 | T | -74.7 | -0.4 | 13.0 | 0.067 | 0.354 |
C:P11181:0.354 |
ACT ACT CL HOH |
4.258 2.824 7.652 5.565 |
NE2 NE2 CB O |
OXT O CL O |
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HIS | B:232 | B:391 | 81.0 | 0.415 | T | -74.6 | -7.0 | 12.0 | 0.062 | 0.353 |
A:P11181:0.354 |
ACT CL CAO HOH |
4.165 7.704 3.075 5.507 |
NE2 CB NE2 NE2 |
OXT CL S1P O |
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HIS | C:232 | C:391 | 83.0 | 0.426 | T | -73.4 | -0.6 | 11.0 | 0.056 | 0.37 |
B:P11181:0.369 |
ACT ACT CL HOH |
4.444 2.705 7.663 5.159 |
NE2 NE2 CB NE2 |
OXT O CL O |
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HIS | D:232 | D:391 | 86.0 | 0.441 | T | -76.2 | -5.8 | 13.0 | 0.067 | 0.374 |
F:P11181:0.374 |
ACT ACT CL HOH |
4.508 2.721 7.937 5.589 |
NE2 NE2 CB NE2 |
CH3 OXT CL O |
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HIS | E:232 | E:391 | 83.0 | 0.426 | T | -71.7 | 3.4 | 13.0 | 0.067 | 0.359 |
D:P11181:0.359 |
ACT ACT CL ACT HOH |
4.376 2.678 7.790 7.470 5.560 |
NE2 NE2 CB NE2 NE2 |
CH3 O CL OXT O |
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HIS | F:232 | F:391 | 87.0 | 0.446 | T | -81.2 | -6.7 | 9.0 | 0.046 | 0.4 |
E:P11181:0.4 |
ACT CL CAO HOH |
3.651 7.502 3.270 5.148 |
NE2 CB NE2 NE2 |
OXT CL S1P O |
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HIS | G:232 | G:391 | 83.0 | 0.426 | T | -74.4 | -6.5 | 20.0 | 0.103 | 0.323 |
G:P11181:0.323 |
ACT CL CAO HOH |
4.194 7.711 3.109 5.336 |
NE2 CB NE2 NE2 |
OXT CL S1P O |
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HIS | H:232 | H:391 | 86.0 | 0.441 | T | -76.3 | 0.2 | 11.0 | 0.056 | 0.385 |
H:P11181:0.385 |
ACT ACT ACT CL HOH |
7.202 4.528 2.633 7.762 5.538 |
NE2 NE2 NE2 CB NE2 |
OXT CH3 O CL O |
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2ii4 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | HIS | A:232 | A:391 | 92.0 | 0.472 | T | -71.5 | -2.7 | 12.0 | 0.062 | 0.41 |
C:P11181:0.41 |
CL COA HOH |
7.621 3.571 3.147 |
CB CE1 NE2 |
CL S1P O |
|
HIS | B:232 | B:391 | 94.0 | 0.482 | T | -68.3 | -9.4 | 12.0 | 0.062 | 0.42 |
A:P11181:0.421 |
CL COA HOH |
7.507 3.577 3.091 |
CB NE2 NE2 |
CL S1P O |
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HIS | C:232 | C:391 | 94.0 | 0.482 | T | -67.3 | -10.0 | 11.0 | 0.056 | 0.426 |
B:P11181:0.426 |
CL COA HOH |
7.329 3.625 2.997 |
CB NE2 NE2 |
CL S1P O |
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HIS | D:232 | D:391 | 91.0 | 0.467 | T | -69.5 | -12.7 | 13.0 | 0.067 | 0.4 |
F:P11181:0.4 |
CL COA HOH |
7.372 3.537 3.105 |
CB CE1 NE2 |
CL S1P O |
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HIS | E:232 | E:391 | 89.0 | 0.456 | T | -66.5 | -5.5 | 13.0 | 0.067 | 0.389 |
D:P11181:0.39 |
CL COA HOH |
7.463 3.549 3.084 |
CB CE1 NE2 |
CL S1P O |
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HIS | F:232 | F:391 | 91.0 | 0.467 | T | -67.2 | -7.7 | 11.0 | 0.056 | 0.411 |
E:P11181:0.41 |
CL COA HOH |
7.617 3.574 3.012 |
CB NE2 NE2 |
CL S1P O |
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HIS | G:232 | G:391 | 92.0 | 0.472 | T | -63.7 | -9.8 | 12.0 | 0.062 | 0.41 |
G:P11181:0.41 |
CL COA HOH |
7.504 3.737 2.984 |
CB NE2 NE2 |
CL S1P O |
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HIS | H:232 | H:391 | 90.0 | 0.462 | T | -72.0 | -4.3 | 12.0 | 0.062 | 0.4 |
H:P11181:0.4 |
CL COA HOH |
7.296 3.629 2.945 |
CB CE1 NE2 |
CL S1P O |
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2ii5 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | HIS | A:232 | A:391 | 82.0 | 0.421 | T | -71.4 | 0.3 | 10.0 | 0.051 | 0.37 |
C:P11181:0.369 |
ACT ACT CL HOH |
4.426 2.682 7.946 8.397 |
NE2 NE2 CB N |
CH3 OXT CL O |
|
HIS | B:232 | B:391 | 84.0 | 0.431 | T | -70.3 | 0.0 | 11.0 | 0.056 | 0.375 |
A:P11181:0.374 |
ACT ACT CL HOH |
4.319 2.399 7.969 7.549 |
NE2 NE2 CB N |
CH3 O CL O |
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HIS | C:232 | C:391 | 83.0 | 0.426 | T | -66.1 | -6.7 | 12.0 | 0.062 | 0.364 |
B:P11181:0.364 |
ACT ACT CL HOH |
4.411 2.866 7.883 5.360 |
NE2 NE2 CB NE2 |
CH3 CH3 CL O |
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HIS | D:232 | D:391 | 81.0 | 0.415 | T | -66.5 | -7.8 | 12.0 | 0.062 | 0.353 |
F:P11181:0.354 |
ACT ACT CL HOH |
4.375 2.688 8.119 7.394 |
NE2 NE2 CB N |
CH3 OXT CL O |
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HIS | E:232 | E:391 | 85.0 | 0.436 | T | -72.0 | 6.6 | 12.0 | 0.062 | 0.374 |
D:P11181:0.374 |
ACT ACT CL HOH |
4.532 2.731 7.978 7.735 |
NE2 NE2 CB O |
CH3 OXT CL O |
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HIS | F:232 | F:391 | 82.0 | 0.421 | T | -59.6 | -9.5 | 10.0 | 0.051 | 0.37 |
E:P11181:0.369 |
ACT ACT CL HOH |
4.389 2.550 7.986 7.433 |
NE2 NE2 CB N |
CH3 OXT CL O |
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HIS | G:232 | G:391 | 82.0 | 0.421 | T | -71.8 | -4.6 | 11.0 | 0.056 | 0.365 |
G:P11181:0.364 |
ACT ACT CL HOH |
4.493 2.702 8.070 5.590 |
NE2 NE2 CB NE2 |
OXT O CL O |
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HIS | H:232 | H:391 | 84.0 | 0.431 | T | -74.4 | -3.1 | 10.0 | 0.051 | 0.38 |
H:P11181:0.379 |
ACT ACT CL HOH |
4.414 2.771 8.046 7.472 |
NE2 CE1 CB O |
CH3 OXT CL O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p11182-f1 | 1 | P11182 | 100.0 | 0.0 | HIS | A:452 | A:452 | 98.0 | 0.503 | T | -68.2 | -5.3 |