Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 100672078 | . | G | A | CCDS767.1:NM_001918.3:c.1132Cag>Tag_NP_001909.3:p.378Q>* | Homo sapiens dihydrolipoamide branched chain transacylase E2 (DBT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2ihw | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | GLN | A:158 | A:317 | 117.0 | 0.65 | H | -75.8 | -37.6 | 117.0 | 0.65 | 0.0 |
HOH |
3.008 |
OE1 |
O |
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GLN | B:158 | B:317 | 122.0 | 0.678 | H | -63.7 | -50.3 | 122.0 | 0.678 | 0.0 |
HOH |
5.506 |
OE1 |
O |
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GLN | C:158 | C:317 | 107.0 | 0.594 | H | -80.3 | -41.3 | 107.0 | 0.594 | 0.0 |
HOH |
8.661 |
O |
O |
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GLN | D:158 | D:317 | 102.0 | 0.567 | H | -56.5 | -51.8 | 102.0 | 0.567 | 0.0 |
HOH |
5.676 |
OE1 |
O |
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GLN | E:158 | E:317 | 120.0 | 0.667 | H | -62.8 | -41.9 | 120.0 | 0.667 | 0.0 |
HOH |
5.141 |
CG |
O |
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GLN | F:158 | F:317 | 107.0 | 0.594 | H | -65.1 | -53.5 | 107.0 | 0.594 | 0.0 |
HOH |
7.187 |
O |
O |
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GLN | G:158 | G:317 | 94.0 | 0.522 | H | -69.2 | -55.4 | 94.0 | 0.522 | 0.0 |
HOH |
6.715 |
O |
O |
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GLN | H:158 | H:317 | 88.0 | 0.489 | H | -62.9 | -52.4 | 88.0 | 0.489 | 0.0 |
HOH |
8.012 |
O |
O |
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2ii3 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | GLN | A:158 | A:317 | 100.0 | 0.556 | H | -58.1 | -44.0 | 100.0 | 0.556 | 0.0 |
CAO HOH |
3.615 2.415 |
NE2 OE1 |
O1A O |
||
GLN | B:158 | B:317 | 101.0 | 0.561 | H | -59.5 | -50.2 | 101.0 | 0.561 | 0.0 |
CAO HOH |
3.521 2.465 |
NE2 OE1 |
O1A O |
|||||||||
GLN | C:158 | C:317 | 99.0 | 0.55 | H | -59.4 | -43.7 | 99.0 | 0.55 | 0.0 |
CAO HOH |
3.299 2.704 |
NE2 OE1 |
O1A O |
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GLN | D:158 | D:317 | 101.0 | 0.561 | H | -56.6 | -50.6 | 101.0 | 0.561 | 0.0 |
CAO ACT HOH |
3.913 9.400 2.478 |
NE2 NE2 OE1 |
O1A CH3 O |
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GLN | E:158 | E:317 | 95.0 | 0.528 | H | -57.0 | -46.1 | 95.0 | 0.528 | 0.0 |
CAO HOH |
3.346 2.700 |
NE2 NE2 |
O1A O |
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GLN | F:158 | F:317 | 91.0 | 0.506 | H | -55.8 | -50.8 | 91.0 | 0.506 | 0.0 |
CAO HOH |
3.705 6.432 |
OE1 O |
O5A O |
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GLN | G:158 | G:317 | 87.0 | 0.483 | H | -61.2 | -45.2 | 87.0 | 0.483 | 0.0 |
CAO HOH |
2.930 3.085 |
NE2 OE1 |
O1A O |
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GLN | H:158 | H:317 | 95.0 | 0.528 | H | -55.5 | -49.2 | 95.0 | 0.528 | 0.0 |
ACT CAO HOH |
9.081 3.432 2.517 |
NE2 NE2 OE1 |
CH3 CCP O |
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2ii4 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | GLN | A:158 | A:317 | 97.0 | 0.539 | H | -63.1 | -46.8 | 97.0 | 0.539 | 0.0 |
COA HOH |
3.312 2.381 |
NE2 OE1 |
O1A O |
||
GLN | B:158 | B:317 | 89.0 | 0.494 | H | -60.4 | -45.6 | 89.0 | 0.494 | 0.0 |
COA HOH |
3.282 5.050 |
NE2 OE1 |
O1A O |
|||||||||
GLN | C:158 | C:317 | 100.0 | 0.556 | H | -65.9 | -43.3 | 100.0 | 0.556 | 0.0 |
COA HOH |
3.006 2.378 |
NE2 OE1 |
O1A O |
|||||||||
GLN | D:158 | D:317 | 100.0 | 0.556 | H | -58.4 | -41.8 | 100.0 | 0.556 | 0.0 |
COA HOH |
3.336 5.071 |
NE2 OE1 |
O3A O |
|||||||||
GLN | E:158 | E:317 | 95.0 | 0.528 | H | -64.1 | -44.7 | 95.0 | 0.528 | 0.0 |
COA HOH |
3.175 5.094 |
NE2 OE1 |
O1A O |
|||||||||
GLN | F:158 | F:317 | 95.0 | 0.528 | H | -69.0 | -40.5 | 95.0 | 0.528 | 0.0 |
COA HOH |
3.281 3.142 |
NE2 CG |
O1A O |
|||||||||
GLN | G:158 | G:317 | 84.0 | 0.467 | H | -55.4 | -39.9 | 84.0 | 0.467 | 0.0 |
COA HOH |
3.074 2.731 |
NE2 OE1 |
O1A O |
|||||||||
GLN | H:158 | H:317 | 99.0 | 0.55 | H | -54.9 | -45.5 | 99.0 | 0.55 | 0.0 |
COA HOH |
2.981 5.144 |
NE2 OE1 |
O1A O |
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2ii5 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | GLN | A:158 | A:317 | 116.0 | 0.644 | H | -65.4 | -48.8 | 116.0 | 0.644 | 0.0 |
CO6 HOH |
3.793 2.737 |
OE1 OE1 |
O5A O |
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GLN | B:158 | B:317 | 112.0 | 0.622 | H | -68.7 | -51.0 | 112.0 | 0.622 | 0.0 |
CO6 HOH |
3.716 7.332 |
OE1 OE1 |
O6A O |
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GLN | C:158 | C:317 | 118.0 | 0.656 | H | -60.4 | -44.3 | 118.0 | 0.656 | 0.0 |
CO6 HOH |
3.694 8.330 |
OE1 OE1 |
O3A O |
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GLN | D:158 | D:317 | 110.0 | 0.611 | H | -64.0 | -45.3 | 110.0 | 0.611 | 0.0 |
CO6 |
4.974 |
OE1 |
O1A |
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GLN | E:158 | E:317 | 125.0 | 0.694 | H | -64.6 | -39.0 | 125.0 | 0.694 | 0.0 |
CO6 HOH |
3.296 6.874 |
OE1 OE1 |
O1A O |
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GLN | F:158 | F:317 | 110.0 | 0.611 | H | -61.7 | -55.6 | 110.0 | 0.611 | 0.0 |
CO6 HOH |
5.726 7.335 |
OE1 O |
O2A O |
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GLN | G:158 | G:317 | 92.0 | 0.511 | H | -66.2 | -47.7 | 92.0 | 0.511 | 0.0 |
CO6 HOH |
6.129 7.025 |
CG O |
O3A O |
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GLN | H:158 | H:317 | 111.0 | 0.617 | H | -59.5 | -55.6 | 111.0 | 0.617 | 0.0 |
CO6 HOH |
4.054 8.318 |
OE1 OE1 |
O1A O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p11182-f1 | 1 | P11182 | 100.0 | 0.0 | GLN | A:378 | A:378 | 108.0 | 0.6 | H | -62.8 | -46.2 |