Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 100672099 | . | C | A | CCDS767.1:NM_001918.3:c.1111Gcc>Tcc_NP_001909.3:p.371A>S | Homo sapiens dihydrolipoamide branched chain transacylase E2 (DBT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2ihw | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | ALA | A:151 | A:310 | 1.0 | 0.009 | H | -52.0 | -55.9 | 1.0 | 0.009 | 0.0 |
HOH |
5.766 |
O |
O |
||
ALA | B:151 | B:310 | 0.0 | 0.0 | H | -57.3 | -53.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.840 |
CB |
O |
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ALA | C:151 | C:310 | 1.0 | 0.009 | H | -56.7 | -47.8 | 1.0 | 0.009 | 0.0 |
HOH |
8.799 |
N |
O |
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ALA | D:151 | D:310 | 2.0 | 0.017 | H | -55.6 | -40.3 | 2.0 | 0.017 | 0.0 |
HOH |
6.290 |
O |
O |
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ALA | E:151 | E:310 | 1.0 | 0.009 | H | -66.4 | -49.3 | 1.0 | 0.009 | 0.0 |
HOH |
5.089 |
O |
O |
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ALA | F:151 | F:310 | 2.0 | 0.017 | H | -62.0 | -36.9 | 2.0 | 0.017 | 0.0 | |||||||||||||
ALA | G:151 | G:310 | 1.0 | 0.009 | H | -49.6 | -49.7 | 1.0 | 0.009 | 0.0 |
HOH |
3.868 |
CB |
O |
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ALA | H:151 | H:310 | 1.0 | 0.009 | H | -52.1 | -50.7 | 1.0 | 0.009 | 0.0 |
HOH |
3.662 |
CB |
O |
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2ii3 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | ALA | A:151 | A:310 | 1.0 | 0.009 | H | -60.4 | -49.4 | 1.0 | 0.009 | 0.0 |
CAO HOH |
7.837 3.927 |
O CB |
O5A O |
||
ALA | B:151 | B:310 | 0.0 | 0.0 | H | -56.6 | -41.0 | 0.0 | 0.0 | 0.0 |
CAO HOH |
7.452 3.766 |
O CB |
O5A O |
|||||||||
ALA | C:151 | C:310 | 0.0 | 0.0 | H | -61.6 | -47.0 | 0.0 | 0.0 | 0.0 |
CAO HOH |
7.711 3.708 |
O CB |
O5A O |
|||||||||
ALA | D:151 | D:310 | 0.0 | 0.0 | H | -56.7 | -47.5 | 0.0 | 0.0 | 0.0 |
CAO HOH |
7.365 3.855 |
O CB |
O5A O |
|||||||||
ALA | E:151 | E:310 | 0.0 | 0.0 | H | -61.1 | -47.0 | 0.0 | 0.0 | 0.0 |
CAO HOH |
7.680 3.717 |
O CB |
O5A O |
|||||||||
ALA | F:151 | F:310 | 0.0 | 0.0 | H | -54.5 | -50.8 | 0.0 | 0.0 | 0.0 |
CAO HOH |
7.727 5.149 |
O O |
O5A O |
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ALA | G:151 | G:310 | 0.0 | 0.0 | H | -59.4 | -48.5 | 0.0 | 0.0 | 0.0 |
CAO HOH |
7.645 3.869 |
O CB |
O5A O |
|||||||||
ALA | H:151 | H:310 | 1.0 | 0.009 | H | -57.9 | -49.1 | 1.0 | 0.009 | 0.0 |
CAO HOH |
7.438 3.672 |
O CB |
O5A O |
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2ii4 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | ALA | A:151 | A:310 | 0.0 | 0.0 | H | -71.4 | -44.5 | 0.0 | 0.0 | 0.0 |
COA HOH |
7.772 3.928 |
O CB |
O5A O |
||
ALA | B:151 | B:310 | 0.0 | 0.0 | H | -53.8 | -44.1 | 0.0 | 0.0 | 0.0 |
COA HOH |
7.547 3.987 |
O CB |
O5A O |
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ALA | C:151 | C:310 | 1.0 | 0.009 | H | -55.4 | -45.7 | 1.0 | 0.009 | 0.0 |
COA HOH |
7.803 4.253 |
O CB |
O5A O |
|||||||||
ALA | D:151 | D:310 | 1.0 | 0.009 | H | -56.9 | -40.0 | 1.0 | 0.009 | 0.0 |
COA HOH |
7.784 3.647 |
O CB |
O5A O |
|||||||||
ALA | E:151 | E:310 | 1.0 | 0.009 | H | -59.3 | -43.0 | 1.0 | 0.009 | 0.0 |
COA HOH |
7.725 3.771 |
O CB |
O5A O |
|||||||||
ALA | F:151 | F:310 | 2.0 | 0.017 | H | -59.4 | -47.6 | 2.0 | 0.017 | 0.0 |
COA HOH |
7.641 4.015 |
O CB |
O5A O |
|||||||||
ALA | G:151 | G:310 | 0.0 | 0.0 | H | -55.5 | -46.2 | 0.0 | 0.0 | 0.0 |
COA HOH |
7.693 4.132 |
O CB |
O5A O |
|||||||||
ALA | H:151 | H:310 | 0.0 | 0.0 | H | -57.2 | -42.7 | 0.0 | 0.0 | 0.0 |
COA HOH |
7.708 3.723 |
O CB |
O5A O |
|||||||||
2ii5 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | ALA | A:151 | A:310 | 2.0 | 0.017 | H | -56.6 | -56.1 | 2.0 | 0.017 | 0.0 |
CO6 HOH |
7.925 5.367 |
O O |
O5A O |
||
ALA | B:151 | B:310 | 0.0 | 0.0 | H | -53.3 | -41.0 | 0.0 | 0.0 | 0.0 |
CO6 HOH |
7.954 3.750 |
O CB |
O5A O |
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ALA | C:151 | C:310 | 1.0 | 0.009 | H | -62.7 | -47.9 | 1.0 | 0.009 | 0.0 |
CO6 HOH |
8.269 8.619 |
O N |
O5A O |
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ALA | D:151 | D:310 | 1.0 | 0.009 | H | -57.7 | -45.6 | 1.0 | 0.009 | 0.0 |
CO6 |
9.597 |
O |
O2A |
|||||||||
ALA | E:151 | E:310 | 1.0 | 0.009 | H | -56.4 | -49.9 | 1.0 | 0.009 | 0.0 |
CO6 HOH |
7.653 3.861 |
O CB |
O5A O |
|||||||||
ALA | F:151 | F:310 | 1.0 | 0.009 | H | -50.0 | -48.3 | 1.0 | 0.009 | 0.0 |
CO6 |
9.408 |
O |
O5A |
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ALA | G:151 | G:310 | 0.0 | 0.0 | H | -54.6 | -48.4 | 0.0 | 0.0 | 0.0 |
CO6 HOH |
8.043 3.842 |
O CB |
O5A O |
|||||||||
ALA | H:151 | H:310 | 1.0 | 0.009 | H | -53.3 | -49.0 | 1.0 | 0.009 | 0.0 |
CO6 HOH |
7.935 3.694 |
O CB |
O5A O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p11182-f1 | 1 | P11182 | 100.0 | 0.0 | ALA | A:371 | A:371 | 1.0 | 0.009 | H | -64.7 | -39.1 |