Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 100680431 | . | A | C | CCDS767.1:NM_001918.3:c.881tTa>tGa_NP_001909.3:p.294L>* | Homo sapiens dihydrolipoamide branched chain transacylase E2 (DBT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2ihw | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | LEU | A:74 | A:233 | 66.0 | 0.388 | H | -91.2 | -25.0 | 0.0 | 0.0 | 0.388 |
F:P11181:0.388 |
HOH |
7.501 |
N |
O |
|
LEU | B:74 | B:233 | 70.0 | 0.412 | H | -82.6 | -30.4 | 0.0 | 0.0 | 0.412 |
D:P11181:0.412 |
HOH |
8.132 |
CD1 |
O |
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LEU | C:74 | C:233 | 66.0 | 0.388 | H | -82.5 | -21.0 | 1.0 | 0.006 | 0.382 |
G:P11181:0.382 |
HOH |
8.042 |
N |
O |
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LEU | D:74 | D:233 | 65.0 | 0.382 | H | -87.8 | -33.6 | 1.0 | 0.006 | 0.376 |
B:P11181:0.376 |
HOH |
7.910 |
N |
O |
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LEU | E:74 | E:233 | 69.0 | 0.406 | H | -89.5 | -35.1 | 1.0 | 0.006 | 0.4 |
H:P11181:0.4 |
HOH |
7.990 |
CD1 |
O |
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LEU | F:74 | F:233 | 59.0 | 0.347 | H | -79.7 | -44.2 | 1.0 | 0.006 | 0.341 |
A:P11181:0.341 |
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LEU | G:74 | G:233 | 71.0 | 0.418 | H | -79.1 | -18.3 | 1.0 | 0.006 | 0.412 |
C:P11181:0.412 |
HOH |
8.465 |
CD1 |
O |
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LEU | H:74 | H:233 | 68.0 | 0.4 | H | -79.9 | -30.5 | 1.0 | 0.006 | 0.394 |
E:P11181:0.394 |
HOH |
7.172 |
CD2 |
O |
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2ii3 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | LEU | A:74 | A:233 | 69.0 | 0.406 | H | -90.0 | -16.7 | 1.0 | 0.006 | 0.4 |
F:P11181:0.4 |
ACT HOH |
7.936 5.784 |
CD1 O |
CH3 O |
|
LEU | B:74 | B:233 | 58.0 | 0.341 | H | -87.3 | -24.2 | 0.0 | 0.0 | 0.341 |
D:P11181:0.341 |
ACT HOH |
7.739 4.828 |
CD1 N |
CH3 O |
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LEU | C:74 | C:233 | 68.0 | 0.4 | H | -81.6 | -30.2 | 0.0 | 0.0 | 0.4 |
G:P11181:0.4 |
ACT HOH |
7.766 6.650 |
CD1 CD2 |
CH3 O |
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LEU | D:74 | D:233 | 59.0 | 0.347 | H | -79.8 | -36.5 | 0.0 | 0.0 | 0.347 |
B:P11181:0.347 |
ACT HOH |
7.766 6.999 |
CD1 CD2 |
CH3 O |
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LEU | E:74 | E:233 | 67.0 | 0.394 | H | -87.7 | -35.5 | 0.0 | 0.0 | 0.394 |
H:P11181:0.394 |
ACT CAO HOH |
7.688 9.965 5.532 |
CD1 C O |
CH3 O8A O |
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LEU | F:74 | F:233 | 63.0 | 0.371 | H | -84.7 | -27.6 | 0.0 | 0.0 | 0.371 |
A:P11181:0.371 |
ACT HOH |
7.793 7.091 |
CD1 CD2 |
CH3 O |
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LEU | G:74 | G:233 | 70.0 | 0.412 | H | -74.4 | -40.5 | 0.0 | 0.0 | 0.412 |
C:P11181:0.412 |
ACT HOH |
7.913 7.904 |
CD1 CD1 |
CH3 O |
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LEU | H:74 | H:233 | 60.0 | 0.353 | H | -82.2 | -29.3 | 0.0 | 0.0 | 0.353 |
E:P11181:0.353 |
ACT HOH |
7.602 6.769 |
CD1 CD2 |
CH3 O |
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2ii4 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | LEU | A:74 | A:233 | 64.0 | 0.376 | H | -95.7 | -21.3 | 1.0 | 0.006 | 0.37 |
F:P11181:0.371 |
HOH |
8.508 |
CD1 |
O |
|
LEU | B:74 | B:233 | 70.0 | 0.412 | H | -95.1 | -23.0 | 1.0 | 0.006 | 0.406 |
D:P11181:0.406 |
HOH |
6.472 |
CD2 |
O |
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LEU | C:74 | C:233 | 61.0 | 0.359 | H | -82.0 | -23.0 | 1.0 | 0.006 | 0.353 |
G:P11181:0.353 |
HOH |
7.951 |
CD1 |
O |
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LEU | D:74 | D:233 | 57.0 | 0.335 | H | -87.0 | -13.1 | 0.0 | 0.0 | 0.335 |
B:P11181:0.335 |
HOH |
8.389 |
CD1 |
O |
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LEU | E:74 | E:233 | 68.0 | 0.4 | H | -93.2 | -28.7 | 0.0 | 0.0 | 0.4 |
H:P11181:0.4 |
HOH |
8.033 |
CD1 |
O |
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LEU | F:74 | F:233 | 66.0 | 0.388 | H | -78.5 | -20.6 | 1.0 | 0.006 | 0.382 |
A:P11181:0.382 |
HOH |
8.264 |
CD1 |
O |
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LEU | G:74 | G:233 | 67.0 | 0.394 | H | -83.8 | -19.3 | 1.0 | 0.006 | 0.388 |
C:P11181:0.388 |
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LEU | H:74 | H:233 | 64.0 | 0.376 | H | -87.0 | -26.0 | 1.0 | 0.006 | 0.37 |
E:P11181:0.371 |
HOH |
6.559 |
CD2 |
O |
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2ii5 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | LEU | A:74 | A:233 | 63.0 | 0.371 | H | -85.7 | -30.7 | 1.0 | 0.006 | 0.365 |
F:P11181:0.365 |
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LEU | B:74 | B:233 | 70.0 | 0.412 | H | -89.6 | -10.8 | 0.0 | 0.0 | 0.412 |
D:P11181:0.412 |
HOH |
9.897 |
O |
O |
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LEU | C:74 | C:233 | 66.0 | 0.388 | H | -85.3 | -17.0 | 0.0 | 0.0 | 0.388 |
G:P11181:0.388 |
HOH |
7.746 |
N |
O |
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LEU | D:74 | D:233 | 61.0 | 0.359 | H | -86.2 | -10.5 | 1.0 | 0.006 | 0.353 |
B:P11181:0.353 |
HOH |
7.941 |
N |
O |
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LEU | E:74 | E:233 | 69.0 | 0.406 | H | -85.1 | -25.1 | 0.0 | 0.0 | 0.406 |
H:P11181:0.406 |
HOH |
7.912 |
CD1 |
O |
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LEU | F:74 | F:233 | 61.0 | 0.359 | H | -84.1 | -29.4 | 1.0 | 0.006 | 0.353 |
A:P11181:0.353 |
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LEU | G:74 | G:233 | 68.0 | 0.4 | H | -77.1 | -37.7 | 0.0 | 0.0 | 0.4 |
C:P11181:0.4 |
HOH |
8.106 |
CD1 |
O |
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LEU | H:74 | H:233 | 66.0 | 0.388 | H | -81.4 | -20.5 | 0.0 | 0.0 | 0.388 |
E:P11181:0.388 |
HOH |
7.298 |
CD2 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p11182-f1 | 1 | P11182 | 100.0 | 0.0 | LEU | A:294 | A:294 | 63.0 | 0.371 | H | -79.1 | -21.7 |