Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 100680485 | . | A | C | CCDS767.1:NM_001918.3:c.827tTt>tGt_NP_001909.3:p.276F>C | Homo sapiens dihydrolipoamide branched chain transacylase E2 (DBT), mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2ihw | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | PHE | A:56 | A:215 | 68.0 | 0.324 | E | -99.5 | 132.0 | 15.0 | 0.071 | 0.253 |
C:P11181:0.252 |
CL ACT ACT CL HOH |
8.656 3.267 3.944 6.127 6.064 |
N CE1 CE1 N N |
CL OXT CH3 CL O |
|
PHE | B:56 | B:215 | 64.0 | 0.305 | E | -104.9 | 131.9 | 11.0 | 0.052 | 0.253 |
A:P11181:0.252 |
ACT ACT CL CL HOH |
3.735 3.842 6.336 8.584 4.165 |
CE1 CE1 N N O |
OXT CH3 CL CL O |
||||||||
PHE | C:56 | C:215 | 63.0 | 0.3 | E | -99.5 | 134.5 | 9.0 | 0.043 | 0.257 |
B:P11181:0.257 |
ACT ACT CL CL HOH |
3.730 4.317 6.374 8.738 5.587 |
CE1 CE1 N N N |
OXT CH3 CL CL O |
||||||||
PHE | D:56 | D:215 | 65.0 | 0.31 | E | -105.1 | 133.2 | 12.0 | 0.057 | 0.253 |
F:P11181:0.252 |
CL ACT ACT CL HOH |
8.559 3.878 4.393 6.092 5.968 |
N CD1 CZ N N |
CL O OXT CL O |
||||||||
PHE | E:56 | E:215 | 65.0 | 0.31 | E | -104.4 | 130.6 | 11.0 | 0.052 | 0.258 |
D:P11181:0.257 |
ACT ACT CL CL HOH |
4.070 3.970 6.300 8.471 6.147 |
CE1 CZ N N N |
O CH3 CL CL O |
||||||||
PHE | F:56 | F:215 | 71.0 | 0.338 | E | -98.8 | 135.4 | 14.0 | 0.067 | 0.271 |
E:P11181:0.271 |
ACT ACT CL CL HOH |
3.557 4.730 6.371 8.507 6.121 |
CE1 CZ N N N |
OXT OXT CL CL O |
||||||||
PHE | G:56 | G:215 | 72.0 | 0.343 | E | -103.4 | 138.4 | 12.0 | 0.057 | 0.286 |
G:P11181:0.286 |
CL ACT ACT CL HOH |
8.579 3.878 3.745 6.439 5.664 |
N CE1 CZ N N |
CL OXT CH3 CL O |
||||||||
PHE | H:56 | H:215 | 64.0 | 0.305 | E | -97.9 | 130.9 | 9.0 | 0.043 | 0.262 |
H:P11181:0.262 |
CL ACT ACT CL HOH |
6.211 3.690 4.163 8.793 5.701 |
N CE1 CE1 N N |
CL O CH3 CL O |
||||||||
2ii3 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | PHE | A:56 | A:215 | 58.0 | 0.276 | E | -100.3 | 134.8 | 8.0 | 0.038 | 0.238 |
C:P11181:0.238 |
CL ACT ACT CL HOH |
8.906 4.141 4.136 6.244 5.978 |
N CE1 CE1 N N |
CL OXT O CL O |
|
PHE | B:56 | B:215 | 62.0 | 0.295 | E | -107.8 | 132.1 | 9.0 | 0.043 | 0.252 |
A:P11181:0.252 |
ACT CL CAO CL HOH |
3.916 6.404 3.761 8.811 3.182 |
CE1 N CZ N CE1 |
OXT CL C2P CL O |
||||||||
PHE | C:56 | C:215 | 60.0 | 0.286 | E | -98.5 | 136.3 | 9.0 | 0.043 | 0.243 |
B:P11181:0.243 |
ACT ACT CL CL HOH |
4.053 4.158 6.105 8.946 3.093 |
CE1 CE1 N N CE1 |
OXT O CL CL O |
||||||||
PHE | D:56 | D:215 | 63.0 | 0.3 | E | -108.2 | 136.4 | 9.0 | 0.043 | 0.257 |
F:P11181:0.257 |
CL ACT ACT CL HOH |
8.861 4.273 4.247 6.450 3.334 |
N CD1 CE1 N CE1 |
CL O OXT CL O |
||||||||
PHE | E:56 | E:215 | 65.0 | 0.31 | E | -106.2 | 137.2 | 9.0 | 0.043 | 0.267 |
D:P11181:0.267 |
ACT ACT CL CL ACT HOH |
4.181 4.514 6.331 8.926 6.415 3.280 |
CD1 CZ N N CZ CE1 |
O O CL CL OXT O |
||||||||
PHE | F:56 | F:215 | 61.0 | 0.29 | E | -99.8 | 137.7 | 9.0 | 0.043 | 0.247 |
E:P11181:0.248 |
ACT CL CAO CL HOH |
3.815 6.377 3.932 8.862 3.186 |
CE1 N CE1 N CE1 |
OXT CL S1P CL O |
||||||||
PHE | G:56 | G:215 | 59.0 | 0.281 | E | -107.4 | 139.5 | 11.0 | 0.052 | 0.229 |
G:P11181:0.229 |
CL ACT CL CAO HOH |
8.879 4.381 6.493 3.940 3.493 |
N CE1 N CZ CE1 |
CL OXT CL C2P O |
||||||||
PHE | H:56 | H:215 | 60.0 | 0.286 | E | -105.2 | 138.2 | 10.0 | 0.048 | 0.238 |
H:P11181:0.238 |
CL ACT ACT ACT CL HOH |
9.022 6.785 4.166 4.214 6.346 3.179 |
N CZ CD1 CE1 N CE1 |
CL OXT O O CL O |
||||||||
2ii4 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | PHE | A:56 | A:215 | 50.0 | 0.238 | E | -94.8 | 140.2 | 11.0 | 0.052 | 0.186 |
C:P11181:0.186 |
CL CL COA HOH |
8.702 6.547 4.195 3.356 |
N N CE1 CE1 |
CL CL S1P O |
|
PHE | B:56 | B:215 | 50.0 | 0.238 | E | -103.3 | 142.5 | 14.0 | 0.067 | 0.171 |
A:P11181:0.171 |
CL COA CL HOH |
6.470 4.140 8.665 3.452 |
N CE1 N CE1 |
CL S1P CL O |
||||||||
PHE | C:56 | C:215 | 48.0 | 0.229 | E | -99.4 | 137.6 | 12.0 | 0.057 | 0.172 |
B:P11181:0.171 |
CL COA CL HOH |
6.331 4.363 8.380 3.577 |
N CE1 N CE1 |
CL S1P CL O |
||||||||
PHE | D:56 | D:215 | 55.0 | 0.262 | E | -109.9 | 135.7 | 13.0 | 0.062 | 0.2 |
F:P11181:0.2 |
CL CL COA HOH |
8.587 6.337 4.045 3.259 |
N N CE1 CE1 |
CL CL S1P O |
||||||||
PHE | E:56 | E:215 | 55.0 | 0.262 | E | -104.7 | 139.7 | 8.0 | 0.038 | 0.224 |
D:P11181:0.224 |
CL COA CL HOH |
6.331 4.339 8.579 3.116 |
N CE1 N CE1 |
CL S1P CL O |
||||||||
PHE | F:56 | F:215 | 51.0 | 0.243 | E | -100.5 | 143.8 | 11.0 | 0.052 | 0.191 |
E:P11181:0.19 |
CL COA CL HOH |
6.459 4.127 8.626 3.491 |
N CE1 N CE1 |
CL S1P CL O |
||||||||
PHE | G:56 | G:215 | 50.0 | 0.238 | E | -109.7 | 139.4 | 11.0 | 0.052 | 0.186 |
G:P11181:0.186 |
CL CL COA HOH |
8.392 6.315 4.390 3.507 |
N N CE1 CE1 |
CL CL S1P O |
||||||||
PHE | H:56 | H:215 | 52.0 | 0.248 | E | -104.7 | 134.7 | 11.0 | 0.052 | 0.196 |
H:P11181:0.195 |
CL CL COA HOH |
8.734 6.401 4.414 3.333 |
N N CE1 CE1 |
CL CL S1P O |
||||||||
2ii5 | 1 | P11181 | 91.51 | 3e-176 |
X-RAY |
2006-12-26 | PHE | A:56 | A:215 | 63.0 | 0.3 | E | -108.9 | 130.7 | 11.0 | 0.052 | 0.248 |
C:P11181:0.248 |
CL ACT ACT CL HOH |
8.714 4.230 3.864 6.191 6.098 |
N CE1 CE1 N N |
CL OXT CH3 CL O |
|
PHE | B:56 | B:215 | 67.0 | 0.319 | E | -109.7 | 128.7 | 11.0 | 0.052 | 0.267 |
A:P11181:0.267 |
ACT ACT CL CL HOH |
3.877 4.107 6.455 8.642 4.630 |
CE1 CE1 N N O |
OXT CH3 CL CL O |
||||||||
PHE | C:56 | C:215 | 62.0 | 0.295 | E | -109.9 | 137.2 | 10.0 | 0.048 | 0.247 |
B:P11181:0.248 |
ACT ACT CL CL HOH |
4.096 4.294 6.135 8.811 3.472 |
CE1 CE1 N N CE1 |
OXT CH3 CL CL O |
||||||||
PHE | D:56 | D:215 | 66.0 | 0.314 | E | -107.8 | 129.6 | 11.0 | 0.052 | 0.262 |
F:P11181:0.262 |
CL ACT ACT CL HOH |
8.561 3.961 4.537 6.226 5.966 |
N CD1 CZ N N |
CL O OXT CL O |
||||||||
PHE | E:56 | E:215 | 69.0 | 0.329 | E | -108.2 | 131.1 | 11.0 | 0.052 | 0.277 |
D:P11181:0.276 |
ACT ACT CL CL HOH |
4.177 4.409 6.178 8.548 6.032 |
CD1 CZ N N N |
O OXT CL CL O |
||||||||
PHE | F:56 | F:215 | 68.0 | 0.324 | E | -103.0 | 132.8 | 12.0 | 0.057 | 0.267 |
E:P11181:0.267 |
ACT ACT CL CL HOH |
3.771 4.207 6.253 8.454 5.989 |
CE1 CE1 N N N |
OXT CH3 CL CL O |
||||||||
PHE | G:56 | G:215 | 65.0 | 0.31 | E | -109.9 | 136.7 | 11.0 | 0.052 | 0.258 |
G:P11181:0.257 |
CL ACT ACT CL HOH |
8.692 4.140 3.756 6.348 3.361 |
N CE1 CE1 N CE1 |
CL OXT CH3 CL O |
||||||||
PHE | H:56 | H:215 | 66.0 | 0.314 | E | -112.1 | 134.3 | 9.0 | 0.043 | 0.271 |
H:P11181:0.271 |
CL ACT ACT CL HOH |
8.709 3.992 4.140 6.244 5.898 |
N CE1 CE1 N N |
CL O CH3 CL O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p11182-f1 | 1 | P11182 | 100.0 | 0.0 | PHE | A:276 | A:276 | 45.0 | 0.214 | E | -72.0 | 137.8 |