Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104114392 . G A CCDS782.1:NM_020978.4:c.168caG>caA_NP_066188.1:p.56Q>Q Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 GLN A:41 A:41 0.0 0.0 E -93.4 123.3 0.0 0.0 0.0 CL
ACI
HOH
5.410
7.715
3.019
OE1
NE2
NE2
CL
O2
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 GLN A:41 A:41 0.0 0.0 E -92.8 122.4 0.0 0.0 0.0 CL
ACI
HOH
5.445
7.710
2.996
NE2
NE2
NE2
CL
O2
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 GLN A:41 A:41 0.0 0.0 E -93.2 118.2 0.0 0.0 0.0 CL
HSD
HOH
5.421
7.825
2.817
OE1
NE2
NE2
CL
O4
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 GLN A:41 A:41 0.0 0.0 E -92.2 121.8 0.0 0.0 0.0 CL
HSD
HOH
5.484
7.825
2.959
OE1
NE2
NE2
CL
O4
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 GLN A:41 A:41 0.0 0.0 E -87.5 125.2 0.0 0.0 0.0 GLC
CL
HOH
9.895
4.618
2.127
HE22
HE22
HE22
O1
CL
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 GLN A:41 A:41 0.0 0.0 E -95.1 120.0 0.0 0.0 0.0 AC1
CL
HOH
7.642
5.345
2.868
NE2
NE2
NE2
O2B
CL
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 GLN A:41 A:41 0.0 0.0 E -94.8 122.2 0.0 0.0 0.0 CL
HOH
5.430
2.764
OE1
NE2
CL
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 GLN A:41 A:41 0.0 0.0 E -93.0 120.7 0.0 0.0 0.0 CL
HMC
HOH
5.488
7.861
2.845
OE1
NE2
NE2
CL
O2
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 GLN A:41 A:41 0.0 0.0 E -91.9 121.4 0.0 0.0 0.0 CL
HOH
5.382
2.862
NE2
NE2
CL
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 GLN A:41 A:41 0.0 0.0 E -95.4 124.0 0.0 0.0 0.0 CL
HOH
5.430
3.003
OE1
NE2
CL
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 GLN A:41 A:41 0.0 0.0 E -95.3 121.7 0.0 0.0 0.0 LAG
CL
HOH
8.290
5.314
2.998
NE2
OE1
NE2
OA2
CL
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 GLN A:41 A:41 0.0 0.0 E -93.2 123.1 0.0 0.0 0.0 LM2
CL
HOH
8.030
5.446
2.981
NE2
OE1
NE2
OA2
CL
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 GLN A:41 A:41 0.0 0.0 E -94.0 129.0 0.0 0.0 0.0 AC1
CL
HOH
7.950
5.421
2.932
NE2
OE1
NE2
O2B
CL
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 GLN A:41 A:41 0.0 0.0 E -97.7 123.0 0.0 0.0 0.0 AC1
CL
HOH
7.782
5.416
2.979
NE2
NE2
NE2
O2B
CL
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 GLN A:41 A:41 0.0 0.0 E -96.4 124.9 0.0 0.0 0.0 ARE
CL
HOH
7.845
5.429
2.933
NE2
NE2
NE2
O2H
CL
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 GLN A:41 A:41 1.0 0.006 E -96.8 124.1 1.0 0.006 0.0 6SA
CL
HOH
7.835
5.439
2.785
NE2
OE1
NE2
OQ2
CL
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLN A:41 A:41 0.0 0.0 E -91.2 117.0 0.0 0.0 0.0 NO2
HOH
5.035
3.258
OE1
OE1
N
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLN A:41 A:41 1.0 0.006 E -86.0 115.3 1.0 0.006 0.0 NO2
QV4
HOH
4.253
8.806
3.149
OE1
NE2
NE2
O2
O2T
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLN A:41 A:41 1.0 0.006 E -90.2 125.2 1.0 0.006 0.0 NO3
HOH
4.202
3.189
OE1
NE2
O2
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLN A:41 A:41 1.0 0.006 E -93.8 128.2 1.0 0.006 0.0 ARE
NO3
HOH
8.426
4.236
3.264
NE2
OE1
NE2
O2H
O2
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLN A:41 A:41 0.0 0.0 E -93.3 119.3 0.0 0.0 0.0 CL
HOH
5.317
2.925
OE1
NE2
CL
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 GLN A:41 A:41 0.0 0.0 E -91.4 118.9 0.0 0.0 0.0 B9D
CL
HOH
7.610
5.359
3.035
NE2
OE1
NE2
O4
CL
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 GLN A:41 A:41 0.0 0.0 E -90.3 121.2 0.0 0.0 0.0 B9D
CL
HOH
7.661
5.416
3.002
NE2
OE1
NE2
O4
CL
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 GLN A:41 A:41 0.0 0.0 E -89.6 120.2 0.0 0.0 0.0 B9D
CL
HOH
7.312
5.417
2.965
NE2
OE1
NE2
O4
CL
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 GLN A:41 A:41 2.0 0.011 E -93.4 123.1 2.0 0.011 0.0 CL
HOH
5.544
3.068
OE1
OE1
CL
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 GLN A:41 A:41 0.0 0.0 E -90.0 124.5 0.0 0.0 0.0 CL
HOH
5.241
3.007
OE1
NE2
CL
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 GLN A:41 A:41 0.0 0.0 E -83.6 122.3 0.0 0.0 0.0 CL
3L9
HOH
5.411
8.025
2.901
OE1
NE2
NE2
CL
O4F
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 GLN A:41 A:41 0.0 0.0 E -86.1 122.3 0.0 0.0 0.0 CL
HOH
4.679
2.114
HE22
HE21
CL
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 GLN A:41 A:41 0.0 0.0 E -86.5 120.3 0.0 0.0 0.0 5J7
CL
HOH
6.777
4.682
2.088
HE22
HE22
HE21
H66
CL
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 GLN A:41 A:41 0.0 0.0 E -86.5 121.8 0.0 0.0 0.0 5QP
CL
HOH
6.818
4.709
2.111
HE22
HE22
HE21
OAD
CL
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 GLN A:41 A:41 0.0 0.0 E -85.6 122.5 0.0 0.0 0.0 CL
HOH
5.404
3.034
NE2
NE2
CL
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 GLN A:41 A:41 0.0 0.0 E -86.0 122.0 0.0 0.0 0.0 CL
HOH
4.652
2.113
HE22
HE21
CL
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 GLN A:41 A:41 0.0 0.0 E -93.3 121.2 0.0 0.0 0.0 CL
HOH
5.433
3.005
NE2
NE2
CL
O
GLN B:41 B:41 0.0 0.0 E -93.5 120.2 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 GLN A:41 A:41 0.0 0.0 E -85.8 122.4 0.0 0.0 0.0 CL
ZXU
HOH
4.646
7.249
2.142
HE22
HE22
HE21
CL
HO60
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 GLN A:41 A:41 0.0 0.0 E -85.2 122.2 0.0 0.0 0.0 ZXY
CL
HOH
6.822
4.660
2.124
HE22
HE22
HE21
HO37
CL
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 GLN A:41 A:41 0.0 0.0 E -96.6 123.5 0.0 0.0 0.0 HOH
2.912
NE2
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 GLN A:41 A:41 0.0 0.0 E -96.1 121.3 0.0 0.0 0.0 AAO
HOH
7.749
3.016
NE2
NE2
O2H
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 GLN A:41 A:41 0.0 0.0 E -92.5 121.5 0.0 0.0 0.0 CL
HOH
5.500
2.577
NE2
N
CL
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 GLN A:41 A:41 0.0 0.0 E -92.7 119.5 0.0 0.0 0.0 ARE
CL
HOH
8.111
5.474
2.984
NE2
NE2
NE2
O2H
CL
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 GLN A:41 A:41 1.0 0.006 E -90.0 123.6 1.0 0.006 0.0 NO3
HOH
4.152
3.146
OE1
NE2
O2
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 GLN A:41 A:41 0.0 0.0 E -94.4 119.1 0.0 0.0 0.0 CL
HOH
5.481
2.921
OE1
NE2
CL
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 GLN A:41 A:41 1.0 0.006 E -91.8 118.0 1.0 0.006 0.0 ARE
NO3
HOH
8.791
4.391
3.163
NE2
OE1
NE2
O2H
O2
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 GLN A:41 A:41 2.0 0.011 E -89.5 126.3 2.0 0.011 0.0 HOH
2.792
NE2
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 GLN A:41 A:41 0.0 0.0 E -91.4 123.1 0.0 0.0 0.0 CL
HOH
5.374
2.774
OE1
NE2
CL
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 GLN A:41 A:41 0.0 0.0 E -89.3 120.2 0.0 0.0 0.0 CL
HOH
5.411
2.795
OE1
NE2
CL
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 GLN A:41 A:41 0.0 0.0 E -81.1 118.8 0.0 0.0 0.0 GLC
CL
HOH
8.176
5.402
3.005
NE2
OE1
NE2
O2
CL
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 GLN A:41 A:41 0.0 0.0 E -95.6 126.4 0.0 0.0 0.0 HOH
3.069
NE2
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 GLN A:41 A:41 0.0 0.0 E -96.1 123.3 0.0 0.0 0.0 CL
HOH
5.416
2.951
OE1
NE2
CL
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 GLN A:41 A:41 11.0 0.061 E -93.1 122.7 11.0 0.061 0.0 HOH
2.889
NE2
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 GLN A:41 A:41 4.0 0.022 E -94.6 122.2 4.0 0.022 0.0 HOH
2.865
NE2
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 GLN A:41 A:41 0.0 0.0 E -95.8 123.4 0.0 0.0 0.0 CL
HOH
5.391
3.053
OE1
OE1
CL
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 GLN A:41 A:41 0.0 0.0 E -90.2 125.1 0.0 0.0 0.0 CL
HOH
5.270
2.841
OE1
NE2
CL
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 GLN A:41 A:41 0.0 0.0 E -84.3 123.7 0.0 0.0 0.0 HMC
CL
HOH
7.635
5.347
2.919
NE2
NE2
NE2
O2
CL
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 GLN A:41 A:41 0.0 0.0 E -96.1 122.3 0.0 0.0 0.0 CL
HOH
5.239
2.884
NE2
NE2
CL
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 GLN A:41 A:41 0.0 0.0 E -86.7 108.4 0.0 0.0 0.0 CL
5.142
OE1
CL
GLN B:41 B:41 0.0 0.0 E -86.7 108.3 0.0 0.0 0.0 CL
5.142
OE1
CL
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 GLN A:41 X:41 0.0 0.0 E -87.7 125.8 0.0 0.0 0.0 CL
TAM
HOH
5.362
9.455
2.754
OE1
NE2
NE2
CL
N
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 GLN A:41 X:41 0.0 0.0 E -85.6 121.6 0.0 0.0 0.0 HMC
CL
HOH
7.736
5.382
2.989
NE2
NE2
NE2
O2
CL
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 GLN A:41 A:41 0.0 0.0 E -88.2 123.2 0.0 0.0 0.0 CL
HOH
5.376
2.937
NE2
NE2
CL
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 GLN A:41 A:41 0.0 0.0 E -83.9 121.1 0.0 0.0 0.0 HMC
CL
HOH
7.729
5.367
2.893
NE2
OE1
NE2
O2
CL
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 GLN A:41 A:41 0.0 0.0 E -82.9 122.6 0.0 0.0 0.0 CL
HMC
HOH
5.412
7.744
2.976
NE2
NE2
NE2
CL
O2
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 GLN A:41 X:41 0.0 0.0 E -83.5 123.8 0.0 0.0 0.0 CL
HMC
HOH
5.391
7.780
3.010
NE2
NE2
NE2
CL
O2
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 GLN A:41 A:41 0.0 0.0 E -87.4 122.0 0.0 0.0 0.0 CL
HOH
5.375
2.954
OE1
NE2
CL
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 GLN A:41 A:41 0.0 0.0 E -88.3 124.0 0.0 0.0 0.0 HMC
CL
HOH
7.585
5.355
2.962
NE2
OE1
NE2
O2
CL
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 GLN A:41 A:41 0.0 0.0 E -83.7 121.7 0.0 0.0 0.0 CL
HMC
HOH
5.427
7.729
2.980
NE2
NE2
NE2
CL
O2
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 GLN A:41 A:41 0.0 0.0 E -93.2 119.5 0.0 0.0 0.0 CL
HOH
5.407
3.011
NE2
NE2
CL
O
GLN B:41 B:41 0.0 0.0 E -91.2 122.0 NA NA NA
GLN C:41 C:41 0.0 0.0 E -92.7 120.5 NA NA NA
GLN D:41 D:41 0.0 0.0 E -93.7 120.9 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 GLN A:41 A:41 0.0 0.0 E -98.6 121.6 0.0 0.0 0.0 CL
HOH
5.329
2.905
NE2
NE2
CL
O
GLN C:41 C:41 0.0 0.0 E -90.3 121.9 NA NA NA
GLN E:41 E:41 0.0 0.0 E -99.8 115.9 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 GLN A:41 A:41 1.0 0.006 E -88.4 124.1 1.0 0.006 0.0 HOH
3.022
NE2
O
GLN B:41 B:41 1.0 0.006 E -90.5 120.1 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 GLN A:41 A:41 0.0 0.0 E -97.5 124.5 0.0 0.0 0.0 CL
HOH
4.203
2.706
HE21
OE1
CL
H1
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 GLN A:41 A:41 0.0 0.0 E -87.6 122.2 0.0 0.0 0.0 DAF
CL
HOH
7.634
5.528
2.886
NE2
NE2
NE2
O2H
CL
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 GLN A:41 A:41 0.0 0.0 E -89.9 124.4 0.0 0.0 0.0 GLC
CL
HOH
9.485
4.556
2.266
HE21
HE21
HE21
H2
CL
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 GLN A:41 A:41 0.0 0.0 E -92.2 126.3 0.0 0.0 0.0 CL
HOH
4.637
2.142
HE21
HE22
CL
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 GLN A:41 A:41 0.0 0.0 E -80.2 121.9 0.0 0.0 0.0 GLC
CL
HOH
7.722
5.370
2.967
NE2
OE1
NE2
O2
CL
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 GLN A:41 A:41 0.0 0.0 E -94.5 124.0 0.0 0.0 0.0 CL
HOH
5.687
2.952
NE2
NE2
CL
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 GLN A:41 A:41 0.0 0.0 E -94.4 122.0 0.0 0.0 0.0 CL
HOH
5.407
3.083
NE2
NE2
CL
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 GLN A:41 A:41 0.0 0.0 E -97.5 121.1 0.0 0.0 0.0 AC1
CL
HOH
7.729
5.303
2.969
NE2
NE2
NE2
O2B
CL
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 GLN A:41 A:41 0.0 0.0 E -85.0 123.1 0.0 0.0 0.0 AC1
CL
HOH
7.726
5.407
3.009
NE2
NE2
NE2
O2B
CL
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 GLN A:41 A:41 0.0 0.0 E -93.7 119.2 0.0 0.0 0.0 BGC
CL
HOH
7.831
5.331
3.030
NE2
NE2
NE2
O2
CL
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 GLN A:41 P:41 0.0 0.0 E -89.4 125.8 0.0 0.0 0.0 CL
HOH
5.131
3.061
OE1
OE1
CL
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 GLN A:41 A:41 1.0 0.006 E -100.8 118.1 1.0 0.006 0.0 CL
HOH
5.511
2.994
OE1
NE2
CL
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 GLN A:41 A:41 0.0 0.0 E -98.0 116.3 0.0 0.0 0.0 HMC
CL
HOH
7.835
5.368
2.983
NE2
NE2
NE2
O2
CL
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 GLN A:41 A:41 0.0 0.0 E -84.7 121.9 0.0 0.0 0.0 CL
HOH
5.344
2.887
NE2
NE2
CL
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 GLN A:56 A:56 0.0 0.0 E -77.7 125.5
af-p04746-f1 1 P04746 98.83 0.0 GLN A:56 A:56 0.0 0.0 E -78.8 126.8
af-p0dte7-f1 1 P0DTE7 97.46 0.0 GLN A:56 A:56 0.0 0.0 E -77.6 126.4
af-p0dte8-f1 1 P0DTE8 97.46 0.0 GLN A:56 A:56 0.0 0.0 E -77.7 126.1
af-p0dub6-f1 1 P0DUB6 97.46 0.0 GLN A:56 A:56 0.0 0.0 E -77.6 125.3