Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104120201 . G A CCDS782.1:NM_020978.4:c.1191tgG>tgA_NP_066188.1:p.397W>* Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 TRP A:382 A:382 1.0 0.004 B -85.4 128.8 1.0 0.004 0.0 BGC
GLC
HOH
8.459
6.869
2.944
O
O
O
O6
O6
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 TRP A:382 A:382 1.0 0.004 B -85.5 129.4 1.0 0.004 0.0 BGC
GLC
HOH
8.789
6.733
2.848
O
O
O
C6
O6
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 TRP A:382 A:382 1.0 0.004 B -82.3 123.7 1.0 0.004 0.0 GLC
HOH
6.722
3.087
O
O
O6
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 TRP A:382 A:382 5.0 0.02 B -87.6 126.0 5.0 0.02 0.0 BGC
HOH
6.713
2.718
O
O
O6
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 TRP A:382 A:382 0.0 0.0 B -80.5 129.0 0.0 0.0 0.0 HOH
2.874
HE3
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 TRP A:382 A:382 6.0 0.024 B -85.8 127.6 6.0 0.024 0.0 HOH
3.616
CZ2
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 TRP A:382 A:382 3.0 0.012 B -84.3 129.1 3.0 0.012 0.0 HOH
3.394
CE3
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 TRP A:382 A:382 5.0 0.02 B -82.8 130.3 5.0 0.02 0.0 HOH
2.686
O
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 TRP A:382 A:382 7.0 0.027 B -84.0 129.5 7.0 0.027 0.0 HOH
3.009
O
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 TRP A:382 A:382 1.0 0.004 B -85.1 130.8 1.0 0.004 0.0 HOH
2.949
O
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 TRP A:382 A:382 1.0 0.004 B -86.9 121.5 1.0 0.004 0.0 HOH
3.027
O
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 TRP A:382 A:382 2.0 0.008 B -87.1 128.5 2.0 0.008 0.0 HOH
2.829
O
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 TRP A:382 A:382 1.0 0.004 B -90.7 127.7 1.0 0.004 0.0 HOH
3.494
CZ3
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 TRP A:382 A:382 2.0 0.008 B -88.9 127.3 2.0 0.008 0.0 HOH
3.559
CE3
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 TRP A:382 A:382 1.0 0.004 B -84.0 128.7 1.0 0.004 0.0 HOH
3.505
CE3
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 TRP A:382 A:382 3.0 0.012 B -84.9 124.0 3.0 0.012 0.0 HOH
3.144
O
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 TRP A:382 A:382 1.0 0.004 B -88.1 126.7 1.0 0.004 0.0 HOH
2.712
O
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 TRP A:382 A:382 1.0 0.004 B -87.1 131.6 1.0 0.004 0.0 HOH
2.641
O
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 TRP A:382 A:382 2.0 0.008 B -86.5 128.4 2.0 0.008 0.0 HOH
3.039
O
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 TRP A:382 A:382 2.0 0.008 B -89.8 126.6 2.0 0.008 0.0 HOH
3.550
CE3
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 TRP A:382 A:382 1.0 0.004 B -90.5 124.3 1.0 0.004 0.0 HOH
2.675
O
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 TRP A:382 A:382 0.0 0.0 B -84.7 124.7 0.0 0.0 0.0 GLF
HOH
6.772
2.994
O
O
O6
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 TRP A:382 A:382 1.0 0.004 B -86.5 125.8 1.0 0.004 0.0 HOH
3.070
O
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 TRP A:382 A:382 0.0 0.0 B -85.9 126.1 0.0 0.0 0.0 HOH
2.848
O
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 TRP A:382 A:382 5.0 0.02 B -91.7 133.5 5.0 0.02 0.0 0XR
HOH
8.667
2.836
NE1
CD2
C2
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 TRP A:382 A:382 1.0 0.004 B -88.1 124.5 1.0 0.004 0.0 HOH
2.556
O
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 TRP A:382 A:382 0.0 0.0 B -83.1 128.6 0.0 0.0 0.0 HOH
3.104
O
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 TRP A:382 A:382 0.0 0.0 B -82.0 128.4 0.0 0.0 0.0 HOH
2.784
HE3
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 TRP A:382 A:382 1.0 0.004 B -78.0 129.4 1.0 0.004 0.0 HOH
2.773
HE3
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 TRP A:382 A:382 1.0 0.004 B -80.0 127.8 1.0 0.004 0.0 HOH
2.792
HE3
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 TRP A:382 A:382 0.0 0.0 B -77.9 129.8 0.0 0.0 0.0 HOH
2.918
O
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 TRP A:382 A:382 0.0 0.0 B -81.3 128.4 0.0 0.0 0.0 HOH
2.780
HE3
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 TRP A:382 A:382 0.0 0.0 B -86.4 129.9 0.0 0.0 0.0 HOH
3.351
CE3
O
TRP B:382 B:382 5.0 0.02 B -87.7 130.3 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 TRP A:382 A:382 1.0 0.004 B -81.6 129.1 1.0 0.004 0.0 HOH
2.806
HE3
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 TRP A:382 A:382 1.0 0.004 B -81.3 129.0 1.0 0.004 0.0 HOH
2.797
HE3
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 TRP A:382 A:382 1.0 0.004 B -87.0 129.9 1.0 0.004 0.0 HOH
3.437
CZ3
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 TRP A:382 A:382 1.0 0.004 B -88.3 131.5 1.0 0.004 0.0 HOH
2.772
O
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 TRP A:382 A:382 2.0 0.008 B -85.6 128.4 2.0 0.008 0.0 HOH
2.764
O
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 TRP A:382 A:382 3.0 0.012 B -90.5 123.0 3.0 0.012 0.0 HOH
3.135
O
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 TRP A:382 A:382 3.0 0.012 B -83.2 129.0 3.0 0.012 0.0 HOH
3.108
O
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 TRP A:382 A:382 5.0 0.02 B -88.6 125.4 5.0 0.02 0.0 HOH
2.717
O
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 TRP A:382 A:382 2.0 0.008 B -85.8 127.1 2.0 0.008 0.0 HOH
3.295
O
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 TRP A:382 A:382 3.0 0.012 B -87.0 122.0 3.0 0.012 0.0 HOH
2.947
O
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 TRP A:382 A:382 2.0 0.008 B -77.9 130.4 2.0 0.008 0.0 HOH
3.303
O
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 TRP A:382 A:382 3.0 0.012 B -87.6 124.7 3.0 0.012 0.0 HOH
3.107
O
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 TRP A:382 A:382 1.0 0.004 B -77.8 124.4 1.0 0.004 0.0 GLC
HOH
7.405
3.530
NE1
CE3
O1
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 TRP A:382 A:382 5.0 0.02 B -81.8 128.2 5.0 0.02 0.0 HOH
2.879
O
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 TRP A:382 A:382 5.0 0.02 B -87.9 125.0 5.0 0.02 0.0 HOH
3.322
O
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 TRP A:382 A:382 6.0 0.024 B -86.6 124.7 6.0 0.024 0.0 HOH
2.971
O
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 TRP A:382 A:382 5.0 0.02 B -84.5 127.9 5.0 0.02 0.0 HOH
3.450
CE3
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 TRP A:382 A:382 2.0 0.008 B -85.8 131.9 2.0 0.008 0.0 HOH
3.490
CE3
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 TRP A:382 A:382 2.0 0.008 B -87.2 118.8 2.0 0.008 0.0 HOH
3.106
O
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 TRP A:382 A:382 5.0 0.02 B -78.2 134.1 5.0 0.02 0.0 HOH
3.154
O
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 TRP A:382 A:382 5.0 0.02 B -86.6 129.1 5.0 0.02 0.0 HOH
3.030
O
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 TRP A:382 A:382 3.0 0.012 B -95.8 124.2 3.0 0.012 0.0 HOH
3.648
CB
O
TRP B:382 B:382 3.0 0.012 B -95.8 124.2 3.0 0.012 0.0 HOH
3.647
CB
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 TRP A:382 X:382 1.0 0.004 B -82.1 124.3 1.0 0.004 0.0 HOH
2.604
O
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 TRP A:382 X:382 0.0 0.0 B -79.3 131.4 0.0 0.0 0.0 HOH
2.900
O
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 TRP A:382 A:382 1.0 0.004 B -88.4 128.8 1.0 0.004 0.0 HOH
3.474
CE3
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 TRP A:382 A:382 1.0 0.004 B -78.2 128.7 1.0 0.004 0.0 HOH
3.208
O
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 TRP A:382 A:382 1.0 0.004 B -79.3 134.0 1.0 0.004 0.0 HOH
3.602
CZ3
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 TRP A:382 X:382 1.0 0.004 B -78.4 132.3 1.0 0.004 0.0 HOH
3.296
O
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 TRP A:377 A:377 3.0 0.012 B -85.5 130.5 3.0 0.012 0.0 HOH
2.981
O
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 TRP A:377 A:377 1.0 0.004 B -79.4 130.5 1.0 0.004 0.0 GLC
GLC
HOH
7.818
6.560
3.067
O
O
O
C6
O6
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 TRP A:382 A:382 0.0 0.0 B -84.7 134.7 0.0 0.0 0.0 HOH
2.789
O
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 TRP A:382 A:382 5.0 0.02 B -85.0 128.7 5.0 0.02 0.0 HOH
3.072
O
O
TRP B:382 B:382 5.0 0.02 B -84.0 128.5 NA NA NA
TRP C:382 C:382 6.0 0.024 B -85.6 126.3 NA NA NA
TRP D:382 D:382 5.0 0.02 B -85.9 126.9 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 TRP A:382 A:382 6.0 0.024 B -84.2 127.4 6.0 0.024 0.0 HOH
2.780
O
O
TRP C:382 C:382 6.0 0.024 B -87.4 127.8 NA NA NA
TRP E:382 E:382 5.0 0.02 B -85.9 127.0 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 TRP A:382 A:382 7.0 0.027 B -82.4 137.4 7.0 0.027 0.0 HOH
2.865
O
O
TRP B:382 B:382 8.0 0.031 B -78.2 134.7 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 TRP A:382 A:382 1.0 0.004 B -87.9 126.6 1.0 0.004 0.0 HOH
2.862
CE3
H2
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 TRP A:382 A:382 4.0 0.016 B -80.0 121.7 4.0 0.016 0.0 HOH
3.145
O
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 TRP A:382 A:382 1.0 0.004 B -81.1 128.6 1.0 0.004 0.0 HOH
2.784
HZ3
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 TRP A:382 A:382 2.0 0.008 B -79.4 127.5 2.0 0.008 0.0 HOH
2.860
HE3
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 TRP A:382 A:382 1.0 0.004 B -74.5 122.9 1.0 0.004 0.0 GLC
HOH
6.935
3.018
O
O
O6
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 TRP A:382 A:382 3.0 0.012 B -96.3 116.9 3.0 0.012 0.0 HOH
3.626
CE3
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 TRP A:382 A:382 6.0 0.024 B -90.8 120.3 6.0 0.024 0.0 MA1
HOH
7.066
3.009
O
O
O6
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 TRP A:382 A:382 1.0 0.004 B -90.9 124.8 1.0 0.004 0.0 HOH
2.730
O
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 TRP A:382 A:382 0.0 0.0 B -80.2 127.4 0.0 0.0 0.0 EDO
EDO
HOH
9.953
6.692
2.924
O
N
O
O1
O1
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 TRP A:382 A:382 0.0 0.0 B -86.9 118.8 0.0 0.0 0.0 BGC
HOH
7.064
3.108
O
O
O6
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 TRP A:382 P:382 4.0 0.016 B -90.3 114.6 4.0 0.016 0.0 HOH
3.752
CZ2
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 TRP A:382 A:382 2.0 0.008 B -92.8 127.2 2.0 0.008 0.0 HOH
3.186
C
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 TRP A:382 A:382 6.0 0.024 B -86.9 123.3 6.0 0.024 0.0 GLC
HOH
7.269
3.719
O
CE3
O6
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 TRP A:382 A:382 1.0 0.004 B -81.0 127.4 1.0 0.004 0.0 HOH
3.614
CZ2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 TRP A:397 A:397 0.0 0.0 B -67.0 127.3
af-p04746-f1 1 P04746 98.83 0.0 TRP A:397 A:397 5.0 0.02 B -74.4 127.2
af-p0dte7-f1 1 P0DTE7 97.46 0.0 TRP A:397 A:397 0.0 0.0 B -66.9 127.5
af-p0dte8-f1 1 P0DTE8 97.46 0.0 TRP A:397 A:397 0.0 0.0 B -65.9 127.6
af-p0dub6-f1 1 P0DUB6 97.46 0.0 TRP A:397 A:397 0.0 0.0 B -66.1 128.1