Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104162314 . T A CCDS783.1:NM_000699.2:c.652Tgg>Agg_NP_000690.1:p.218W>R Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 TRP A:203 A:203 76.0 0.298 -73.0 137.1 76.0 0.298 0.0 CA
HOH
6.086
3.553
N
CB
CA
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 TRP A:203 A:203 83.0 0.325 -72.5 135.8 83.0 0.325 0.0 CA
HOH
6.253
2.802
N
N
CA
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 TRP A:203 A:203 82.0 0.322 -69.0 132.5 82.0 0.322 0.0 CA
HOH
6.240
2.790
N
N
CA
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 TRP A:203 A:203 76.0 0.298 -73.0 139.3 76.0 0.298 0.0 CA
HOH
6.094
2.758
N
N
CA
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 TRP A:203 A:203 86.0 0.337 -73.7 136.0 86.0 0.337 0.0 CA
HOH
6.213
2.674
N
N
CA
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 TRP A:203 A:203 81.0 0.318 -73.4 135.8 81.0 0.318 0.0 CA
HOH
6.257
2.686
N
N
CA
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 TRP A:203 A:203 81.0 0.318 -71.1 135.2 81.0 0.318 0.0 CA
HOH
6.149
2.680
N
N
CA
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 TRP A:203 A:203 89.0 0.349 -70.0 141.1 89.0 0.349 0.0 CA
HOH
6.238
2.691
N
N
CA
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 TRP A:203 A:203 88.0 0.345 -70.0 136.4 88.0 0.345 0.0 CA
HOH
6.225
2.798
N
N
CA
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 TRP A:203 A:203 83.0 0.325 -69.7 134.4 83.0 0.325 0.0 CA
HOH
6.252
2.806
N
N
CA
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 TRP A:203 A:203 85.0 0.333 -75.6 139.8 85.0 0.333 0.0 CA
HOH
6.444
2.912
N
N
CA
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 TRP A:203 A:203 86.0 0.337 -73.9 136.7 86.0 0.337 0.0 CA
HOH
6.093
2.651
N
N
CA
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 TRP A:203 A:203 81.0 0.318 -70.6 135.3 81.0 0.318 0.0 CA
HOH
6.095
2.595
N
N
CA
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 TRP A:203 A:203 84.0 0.329 -74.3 137.9 84.0 0.329 0.0 CA
HOH
6.194
2.793
N
N
CA
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 TRP A:203 A:203 87.0 0.341 -74.4 138.2 87.0 0.341 0.0 CA
HOH
6.336
2.772
N
N
CA
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 TRP A:203 A:203 78.0 0.306 -69.3 136.4 78.0 0.306 0.0 CA
AZI
AZI
HOH
6.071
9.978
9.876
2.714
N
N
NE1
N
CA
N1
N1
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 TRP A:203 A:203 77.0 0.302 -71.5 134.2 77.0 0.302 0.0 CA
HOH
6.168
2.674
N
N
CA
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 TRP A:203 A:203 74.0 0.29 -71.5 135.1 74.0 0.29 0.0 B0D
B0D
CA
HOH
3.257
6.735
6.146
2.754
CD2
O
N
N
O5
O6
CA
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 TRP A:203 A:203 76.0 0.298 -70.7 132.3 76.0 0.298 0.0 B0D
B0D
CA
HOH
3.283
6.601
6.109
2.641
CD2
O
N
N
O5
C6
CA
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 TRP A:203 A:203 76.0 0.298 -77.2 140.0 76.0 0.298 0.0 CA
HOH
6.073
2.751
N
N
CA
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 TRP A:203 A:203 80.0 0.314 -72.4 136.4 80.0 0.314 0.0 CA
HOH
6.126
2.799
N
N
CA
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 TRP A:203 A:203 82.0 0.322 -69.1 133.5 82.0 0.322 0.0 CA
HOH
6.109
2.628
N
N
CA
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 TRP A:203 A:203 82.0 0.322 -69.7 136.3 82.0 0.322 0.0 CA
HOH
5.721
1.936
H
H
CA
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 TRP A:203 A:203 86.0 0.337 -68.1 135.5 86.0 0.337 0.0 CA
HOH
5.710
1.949
H
H
CA
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 TRP A:203 A:203 81.0 0.318 -70.1 136.7 81.0 0.318 0.0 CA
HOH
5.755
1.940
H
H
CA
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 TRP A:203 A:203 80.0 0.314 -68.6 135.0 80.0 0.314 0.0 CA
HOH
6.125
2.805
N
N
CA
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 TRP A:203 A:203 82.0 0.322 -69.9 136.7 82.0 0.322 0.0 CA
HOH
5.705
1.938
H
H
CA
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 TRP A:203 A:203 77.0 0.302 -72.4 140.1 77.0 0.302 0.0 CA
HOH
5.901
3.710
N
CB
CA
O
TRP B:203 B:203 84.0 0.329 -71.2 140.1 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 TRP A:203 A:203 82.0 0.322 -69.6 136.6 82.0 0.322 0.0 CA
HOH
5.715
1.959
H
H
CA
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 TRP A:203 A:203 83.0 0.325 -69.4 136.6 83.0 0.325 0.0 CA
HOH
5.723
1.947
H
H
CA
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 TRP A:203 A:203 86.0 0.337 -66.7 136.1 86.0 0.337 0.0 CA
HOH
6.115
2.750
N
N
CA
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 TRP A:203 A:203 85.0 0.333 -67.2 137.4 85.0 0.333 0.0 CA
HOH
6.127
2.758
N
N
CA
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 TRP A:203 A:203 87.0 0.341 -68.1 129.4 87.0 0.341 0.0 BGC
GLC
GLC
CA
HOH
3.481
4.480
8.627
6.061
2.711
CG
CH2
CH2
N
N
C5
O5
C1
CA
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 TRP A:203 A:203 87.0 0.341 -71.8 134.3 87.0 0.341 0.0 GLC
GLC
CA
HOH
3.780
3.518
6.143
2.808
CZ3
CD2
N
N
C6
O5
CA
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 TRP A:203 A:203 85.0 0.333 -67.0 134.5 85.0 0.333 0.0 CA
HOH
6.158
2.775
N
N
CA
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 TRP A:203 A:203 83.0 0.325 -72.7 137.1 83.0 0.325 0.0 CA
HOH
6.218
2.709
N
N
CA
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 TRP A:203 A:203 88.0 0.345 -73.4 135.5 88.0 0.345 0.0 HOH
2.944
N
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 TRP A:203 A:203 84.0 0.329 -73.0 133.3 84.0 0.329 0.0 CA
HOH
6.215
2.843
N
N
CA
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 TRP A:203 A:203 90.0 0.353 -72.0 134.2 90.0 0.353 0.0 CA
HOH
6.284
2.822
N
N
CA
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 TRP A:203 A:203 80.0 0.314 -74.3 136.2 80.0 0.314 0.0 CA
HOH
6.194
2.701
N
N
CA
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 TRP A:203 A:203 82.0 0.322 -69.6 135.3 82.0 0.322 0.0 CA
HOH
6.089
2.711
N
N
CA
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 TRP A:203 A:203 82.0 0.322 -77.4 136.1 82.0 0.322 0.0 CA
HOH
6.183
2.659
N
N
CA
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 TRP A:203 A:203 84.0 0.329 -71.8 131.2 84.0 0.329 0.0 CA
HOH
6.230
2.805
N
N
CA
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 TRP A:203 A:203 77.0 0.302 -66.6 133.7 77.0 0.302 0.0 GLC
CA
HOH
2.475
5.730
2.057
NE1
H
H
H2
CA
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 TRP A:203 A:203 78.0 0.306 -72.1 136.0 78.0 0.306 0.0 CA
HOH
6.155
2.791
N
N
CA
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 TRP A:203 A:203 83.0 0.325 -73.9 134.7 83.0 0.325 0.0 CA
HOH
6.206
2.745
N
N
CA
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 TRP A:203 A:203 79.0 0.31 -66.9 136.6 79.0 0.31 0.0 CA
HOH
6.125
2.676
N
N
CA
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 TRP A:203 A:203 84.0 0.329 -67.3 132.6 84.0 0.329 0.0 GLC
GLC
CA
HOH
3.017
3.316
6.134
2.646
CH2
NE1
N
N
O3
C2
CA
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 TRP A:203 A:203 86.0 0.337 -72.8 133.2 86.0 0.337 0.0 CA
HOH
6.192
2.708
N
N
CA
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 TRP A:203 A:203 79.0 0.31 -77.9 136.4 79.0 0.31 0.0 CA
HOH
6.211
2.783
N
N
CA
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 TRP A:203 A:203 89.0 0.349 -72.3 134.6 89.0 0.349 0.0 CA
HOH
6.183
2.805
N
N
CA
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 TRP A:203 A:203 77.0 0.302 -67.8 139.4 77.0 0.302 0.0 CA
HOH
6.162
2.725
N
N
CA
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 TRP A:203 A:203 75.0 0.294 -67.8 133.0 75.0 0.294 0.0 CA
HOH
6.226
2.802
N
N
CA
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 TRP A:203 A:203 75.0 0.294 -82.6 133.9 75.0 0.294 0.0 CA
HOH
6.300
2.699
N
N
CA
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 TRP A:203 A:203 80.0 0.314 -67.6 131.7 80.0 0.314 0.0 CA
HOH
6.264
5.938
N
C
CA
O
TRP B:203 B:203 79.0 0.31 -67.7 131.8 79.0 0.31 0.0 CA
HOH
6.263
5.938
N
C
CA
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 TRP A:203 X:203 75.0 0.294 -68.4 131.6 75.0 0.294 0.0 CA
HOH
6.174
2.865
N
N
CA
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 TRP A:203 A:203 78.0 0.306 -67.5 131.3 78.0 0.306 0.0 CA
HOH
6.201
2.868
N
N
CA
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 TRP A:203 X:203 75.0 0.294 -63.9 131.3 75.0 0.294 0.0 CA
HOH
6.237
2.851
N
N
CA
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 TRP A:203 A:203 78.0 0.306 -61.6 131.0 78.0 0.306 0.0 CA
HOH
6.162
2.926
N
N
CA
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 TRP A:203 A:203 77.0 0.302 -66.6 133.5 77.0 0.302 0.0 CA
HOH
6.223
2.845
N
N
CA
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 TRP A:203 X:203 76.0 0.298 -67.6 134.0 76.0 0.298 0.0 CA
HOH
6.172
2.775
N
N
CA
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 TRP A:203 A:203 75.0 0.294 -71.9 132.0 75.0 0.294 0.0 CA
HOH
6.203
2.704
N
N
CA
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 TRP A:203 A:203 80.0 0.314 -64.3 131.4 80.0 0.314 0.0 GLC
GLC
CA
HOH
3.696
3.555
6.221
2.959
CZ3
CD2
N
N
C6
O5
CA
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 ALA A:203 A:203 29.0 0.252 -63.1 141.7 29.0 0.252 0.0 CA
HOH
6.293
2.827
N
N
CA
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 TRP A:203 A:203 64.0 0.251 -72.3 136.2 64.0 0.251 0.0 CA
HOH
6.186
2.794
N
N
CA
O
TRP B:203 B:203 65.0 0.255 -78.1 136.4 NA NA NA
TRP C:203 C:203 67.0 0.263 -73.7 134.8 NA NA NA
TRP D:203 D:203 50.0 0.196 -79.1 134.0 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 TRP A:203 A:203 64.0 0.251 -77.5 137.2 64.0 0.251 0.0 CA
HOH
6.093
2.766
N
N
CA
O
TRP C:203 C:203 65.0 0.255 -88.0 132.7 NA NA NA
TRP E:203 E:203 66.0 0.259 -76.7 138.4 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 TRP A:203 A:203 71.0 0.278 -73.5 138.8 9.0 0.035 0.243 C:None:0.243
HOH
2.767
N
O
TRP B:203 B:203 67.0 0.263 -73.2 142.6 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 TRP A:203 A:203 63.0 0.247 -75.5 138.3 63.0 0.247 0.0 CA
HOH
6.391
1.467
H
H
CA
H2
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 TRP A:203 A:203 64.0 0.251 -74.5 136.2 64.0 0.251 0.0 CA
HOH
6.185
2.841
N
N
CA
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 TRP A:203 A:203 62.0 0.243 -75.7 133.5 62.0 0.243 0.0 CA
HOH
6.300
2.854
N
N
CA
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 TRP A:203 A:203 61.0 0.239 -75.8 134.7 61.0 0.239 0.0 GLC
CA
HOH
2.350
5.867
2.076
HB3
H
H
H62
CA
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 TRP A:203 A:203 62.0 0.243 -77.8 134.8 62.0 0.243 0.0 CA
HOH
5.949
1.994
H
H
CA
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 TRP A:203 A:203 63.0 0.247 -70.6 134.2 63.0 0.247 0.0 CL
CA
BGC
HOH
3.636
6.220
3.621
2.858
CB
N
CE2
N
CL
CA
C2
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 TRP A:203 A:203 62.0 0.243 -74.9 134.4 62.0 0.243 0.0 CA
HOH
6.220
2.896
N
N
CA
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 TRP A:203 A:203 66.0 0.259 -77.5 135.1 66.0 0.259 0.0 CA
HOH
6.319
2.837
N
N
CA
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 TRP A:203 A:203 62.0 0.243 -70.2 134.1 62.0 0.243 0.0 CL
CA
CL
HOH
3.857
6.241
6.114
2.822
CB
N
CD1
N
CL
CA
CL
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 TRP A:203 A:203 61.0 0.239 -73.9 137.1 61.0 0.239 0.0 CA
HOH
6.242
2.858
N
N
CA
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 TRP A:203 P:203 64.0 0.251 -82.5 134.0 64.0 0.251 0.0 CA
HOH
5.891
3.538
N
NE1
CA
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 TRP A:203 A:203 57.0 0.224 -79.8 137.3 57.0 0.224 0.0 CA
HOH
6.354
2.877
N
N
CA
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 TRP A:203 A:203 62.0 0.243 -73.6 135.4 62.0 0.243 0.0 CA
HOH
6.343
2.929
N
N
CA
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 TRP A:203 A:203 58.0 0.227 -70.5 133.4 58.0 0.227 0.0 CA
HOH
6.114
2.553
N
N
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 TRP A:218 A:218 75.0 0.294 -64.8 134.3
af-p19961-f1 1 P19961 98.83 0.0 TRP A:218 A:218 85.0 0.333 -64.4 135.9
af-p0dte7-f1 1 P0DTE7 96.87 0.0 TRP A:218 A:218 82.0 0.322 -63.9 135.0
af-p0dte8-f1 1 P0DTE8 96.87 0.0 TRP A:218 A:218 83.0 0.325 -64.0 134.8
af-p0dub6-f1 1 P0DUB6 96.87 0.0 TRP A:218 A:218 84.0 0.329 -64.5 136.2