Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104205596 . G A CCDS30782.1:NM_001008221.1:c.1309Gga>Aga_NP_001008222.1:p.437G>R Homo sapiens amylase, alpha 1A (salivary) (AMY1A), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1c8q 1 P04745 99.8 0.0 X-RAY
2001-06-13 GLY A:422 A:422 12.0 0.16 T 57.5 -135.1 12.0 0.16 0.0 HOH
7.710
N
O
1mfv 1 P04745 99.8 0.0 X-RAY
2002-11-20 GLY A:422 A:422 13.0 0.173 T 47.0 -132.1 13.0 0.173 0.0 HOH
2.769
O
O
1smd 1 P04745 99.8 0.0 X-RAY
1996-07-11 GLY A:422 A:422 14.0 0.187 T 60.4 -132.3 14.0 0.187 0.0 HOH
9.318
N
O
1xv8 1 P04745 99.8 0.0 X-RAY
2005-10-11 GLY A:422 A:422 15.0 0.2 T 50.2 -130.2 15.0 0.2 0.0 HOH
6.524
C
O
GLY B:422 B:422 16.0 0.213 T 50.3 -130.3 16.0 0.213 0.0 HOH
6.525
C
O
1q4n 1 P04745 99.6 0.0 X-RAY
2004-03-16 GLY A:422 X:422 13.0 0.173 T 39.9 -127.3 13.0 0.173 0.0 HOH
2.853
O
O
1z32 1 P04745 99.6 0.0 X-RAY
2005-05-31 GLY A:422 X:422 13.0 0.173 T 50.2 -132.7 13.0 0.173 0.0 HOH
2.867
O
O
1jxj 1 P04745 99.6 0.0 X-RAY
2001-09-14 GLY A:422 A:422 13.0 0.173 T 46.7 -130.1 13.0 0.173 0.0 HOH
2.896
O
O
1nm9 1 P04745 99.6 0.0 X-RAY
2004-01-20 GLY A:422 A:422 12.0 0.16 T 49.8 -131.6 12.0 0.16 0.0 HOH
2.866
O
O
3blk 1 P04745 99.6 0.0 X-RAY
2008-11-25 GLY A:422 A:422 13.0 0.173 T 54.2 -136.3 13.0 0.173 0.0 HOH
2.748
O
O
3blp 1 P04745 99.6 0.0 X-RAY
2008-11-18 GLY A:422 X:422 13.0 0.173 T 41.9 -128.5 13.0 0.173 0.0 HOH
2.865
O
O
1jxk 1 P04745 98.79 0.0 X-RAY
2001-09-14 GLY A:417 A:417 14.0 0.187 T 50.5 -132.3 14.0 0.187 0.0 HOH
2.958
O
O
1mfu 1 P04745 98.79 0.0 X-RAY
2002-11-20 GLY A:417 A:417 13.0 0.173 T 47.4 -131.7 13.0 0.173 0.0 HOH
2.818
O
O
3dhp 1 P04745 98.59 0.0 X-RAY
2008-07-01 GLY A:422 A:422 14.0 0.187 T 46.0 -131.0 14.0 0.187 0.0 HOH
2.838
O
O
3old 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLY A:422 A:422 13.0 0.173 T 53.5 -139.2 13.0 0.173 0.0 HOH
2.566
O
O
3ole 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLY A:422 A:422 12.0 0.16 T 56.2 -135.6 12.0 0.16 0.0 HOH
2.794
O
O
3olg 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLY A:422 A:422 15.0 0.2 T 57.6 -131.5 15.0 0.2 0.0 HOH
2.755
O
O
3oli 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLY A:422 A:422 15.0 0.2 T 56.5 -131.3 15.0 0.2 0.0 HOH
2.777
O
O
6z8l 1 P04746 97.18 0.0 X-RAY
2020-12-02 GLY A:422 A:422 13.0 0.173 T 45.9 -132.6 13.0 0.173 0.0 HOH
2.769
O
O
1b2y 1 P04746 97.18 0.0 X-RAY
2000-02-16 GLY A:422 A:422 15.0 0.2 T 61.3 -131.8 15.0 0.2 0.0 HOH
2.599
O
O
1bsi 1 P04746 96.98 0.0 X-RAY
1999-05-18 GLY A:422 A:422 12.0 0.16 T 56.7 -135.9 12.0 0.16 0.0 HOH
2.810
O
O
1cpu 1 P04746 96.98 0.0 X-RAY
1999-06-14 GLY A:422 A:422 14.0 0.187 T 54.3 -134.5 14.0 0.187 0.0 HOH
2.850
O
O
1hny 1 P04746 96.98 0.0 X-RAY
1996-03-08 GLY A:422 A:422 16.0 0.213 T 59.6 -134.8 16.0 0.213 0.0 HOH
2.751
O
O
1u2y 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLY A:422 A:422 13.0 0.173 T 53.8 -133.2 13.0 0.173 0.0 HOH
2.745
O
O
1u30 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLY A:422 A:422 12.0 0.16 T 61.6 -125.4 12.0 0.16 0.0 HOH
6.673
O
O
1u33 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLY A:422 A:422 13.0 0.173 T 51.7 -133.4 13.0 0.173 0.0 HOH
2.746
O
O
1xcw 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLY A:422 A:422 13.0 0.173 T 56.3 -134.1 13.0 0.173 0.0 HOH
7.590
N
O
1xcx 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLY A:422 A:422 13.0 0.173 T 54.2 -136.7 13.0 0.173 0.0 HOH
9.205
N
O
1xd0 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLY A:422 A:422 14.0 0.187 T 55.2 -132.0 14.0 0.187 0.0 HOH
7.745
N
O
1xd1 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLY A:422 A:422 12.0 0.16 T 54.2 -138.1 12.0 0.16 0.0 HOH
7.708
N
O
2qmk 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:422 A:422 13.0 0.173 T 65.4 -132.3 13.0 0.173 0.0 HOH
2.684
O
O
2qv4 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:422 A:422 15.0 0.2 T 54.6 -137.3 15.0 0.2 0.0 HOH
2.735
O
O
3bai 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:422 A:422 14.0 0.187 T 52.9 -133.5 14.0 0.187 0.0 HOH
2.703
O
O
3baj 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:422 A:422 13.0 0.173 T 51.6 -133.7 13.0 0.173 0.0 HOH
2.705
O
O
3baw 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:422 A:422 13.0 0.173 T 54.9 -137.2 13.0 0.173 0.0 HOH
2.805
O
O
3ij7 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLY A:422 A:422 13.0 0.173 T 53.1 -134.2 13.0 0.173 0.0 HOH
2.780
O
O
3ij8 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLY A:422 A:422 14.0 0.187 T 58.3 -130.2 14.0 0.187 0.0 HOH
2.730
O
O
3ij9 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLY A:422 A:422 13.0 0.173 T 57.3 -134.5 13.0 0.173 0.0 HOH
2.784
O
O
4gqq 1 P04746 96.98 0.0 X-RAY
2012-10-24 GLY A:422 A:422 12.0 0.16 T 56.9 -133.7 12.0 0.16 0.0 HOH
2.628
O
O
4gqr 1 P04746 96.98 0.0 X-RAY
2012-10-24 GLY A:422 A:422 12.0 0.16 T 53.3 -133.1 12.0 0.16 0.0 HOH
2.719
O
O
4w93 1 P04746 96.98 0.0 X-RAY
2015-07-15 GLY A:422 A:422 12.0 0.16 T 48.5 -137.2 12.0 0.16 0.0 HOH
2.840
O
O
4x9y 1 P04746 96.98 0.0 X-RAY
2014-12-31 GLY A:422 A:422 13.0 0.173 T 48.3 -131.3 13.0 0.173 0.0 HOH
2.799
O
O
5e0f 1 P04746 96.98 0.0 X-RAY
2016-09-07 GLY A:422 A:422 13.0 0.173 T 45.0 -129.7 13.0 0.173 0.0 HOH
2.870
O
O
5emy 1 P04746 96.98 0.0 X-RAY
2016-07-06 GLY A:422 A:422 13.0 0.173 T 49.2 -133.0 13.0 0.173 0.0 HOH
2.772
O
O
5kez 1 P04746 96.98 0.0 X-RAY
2017-03-29 GLY A:422 A:422 12.0 0.16 T 56.2 -134.7 12.0 0.16 0.0 HOH
2.901
O
O
5u3a 1 P04746 96.98 0.0 X-RAY
2017-12-06 GLY A:422 A:422 13.0 0.173 T 48.3 -131.7 13.0 0.173 0.0 HOH
2.611
HA2
O
5va9 1 P04746 96.98 0.0 X-RAY
2018-03-28 GLY A:422 A:422 8.0 0.107 T 53.1 -133.6 8.0 0.107 0.0 HOH
2.842
O
O
GLY B:422 B:422 7.0 0.093 T 52.7 -135.2 NA NA NA
6obx 1 P04746 96.98 0.0 X-RAY
2020-02-12 GLY A:422 A:422 13.0 0.173 T 49.9 -132.3 13.0 0.173 0.0 HOH
2.810
O
O
6ocn 1 P04746 96.98 0.0 X-RAY
2020-02-12 GLY A:422 A:422 13.0 0.173 T 47.9 -131.3 13.0 0.173 0.0 HOH
2.785
O
O
1kgw 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLY A:422 A:422 16.0 0.213 T 60.6 -126.5 16.0 0.213 0.0 HOH
8.301
CA
O
1xgz 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLY A:422 A:422 14.0 0.187 T 56.8 -134.1 14.0 0.187 0.0 HOH
2.727
O
O
1xh0 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLY A:422 A:422 12.0 0.16 T 53.9 -136.7 12.0 0.16 0.0 HOH
2.663
O
O
1xh1 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLY A:422 A:422 13.0 0.173 T 53.5 -136.3 13.0 0.173 0.0 HOH
2.738
O
O
1xh2 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLY A:422 A:422 12.0 0.16 T 55.7 -138.7 12.0 0.16 0.0 HOH
2.766
O
O
3bak 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLY A:422 A:422 14.0 0.187 T 54.2 -135.2 14.0 0.187 0.0 HOH
2.779
O
O
3bax 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLY A:422 A:422 13.0 0.173 T 55.0 -136.7 13.0 0.173 0.0 HOH
2.743
O
O
3bay 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLY A:422 A:422 15.0 0.2 T 54.8 -138.4 15.0 0.2 0.0 HOH
2.703
O
O
1kgx 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLY A:422 A:422 15.0 0.2 T 58.5 -130.6 15.0 0.2 0.0 HOH
2.699
O
O
2cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 GLY A:422 A:422 13.0 0.173 T 54.5 -136.1 13.0 0.173 0.0 HOH
2.889
O
O
3cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 GLY A:422 A:422 15.0 0.2 T 59.5 -128.9 15.0 0.2 0.0 HOH
2.729
O
O
5td4 1 P04746 96.77 0.0 X-RAY
2016-11-02 GLY A:422 A:422 12.0 0.16 T 52.9 -132.1 12.0 0.16 0.0 HOH
4.088
C
O
1kgu 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLY A:422 A:422 15.0 0.2 T 58.7 -129.3 15.0 0.2 0.0 HOH
2.836
O
O
1kb3 1 P04746 96.77 0.0 X-RAY
2002-05-01 GLY A:422 A:422 14.0 0.187 T 59.5 -128.7 14.0 0.187 0.0 HOH
2.742
O
O
1kbb 1 P04746 96.77 0.0 X-RAY
2002-04-10 GLY A:422 A:422 13.0 0.173 T 59.0 -132.1 13.0 0.173 0.0 HOH
2.821
O
O
1kbk 1 P04746 96.77 0.0 X-RAY
2002-04-10 GLY A:422 A:422 13.0 0.173 T 52.6 -135.9 13.0 0.173 0.0 HOH
9.457
N
O
1kxq 1 P00690 86.29 0.0 X-RAY
2002-06-19 GLY A:422 A:422 16.0 0.213 T 51.0 -133.4 16.0 0.213 0.0 HOH
2.903
O
O
GLY B:422 B:422 15.0 0.2 T 57.3 -133.9 NA NA NA
GLY C:422 C:422 16.0 0.213 T 53.5 -133.4 NA NA NA
GLY D:422 D:422 14.0 0.187 T 50.5 -133.5 NA NA NA
1kxt 1 P00690 86.29 0.0 X-RAY
2002-06-19 GLY A:422 A:422 16.0 0.213 T 58.5 -138.8 16.0 0.213 0.0 HOH
3.003
O
O
GLY C:422 C:422 15.0 0.2 T 60.4 -138.1 NA NA NA
GLY E:422 E:422 16.0 0.213 T 59.6 -134.0 NA NA NA
1kxv 1 P00690 86.29 0.0 X-RAY
2002-06-19 GLY A:422 A:422 15.0 0.2 T 47.4 -130.9 15.0 0.2 0.0 HOH
2.918
O
O
GLY B:422 B:422 15.0 0.2 T 50.0 -131.1 NA NA NA
1dhk 1 P00690 86.29 0.0 X-RAY
1997-12-24 GLY A:422 A:422 16.0 0.213 T 56.7 -130.1 16.0 0.213 0.0 HOH
2.636
O
H1
1ppi 1 P00690 86.29 0.0 X-RAY
1995-05-24 GLY A:422 A:422 15.0 0.2 T 59.5 -146.5 15.0 0.2 0.0 HOH
2.772
O
O
1vah 1 P00690 86.09 0.0 X-RAY
2005-04-26 GLY A:422 A:422 15.0 0.2 T 67.3 -134.3 15.0 0.2 0.0 HOH
2.540
O
O
3l2l 1 P00690 86.09 0.0 X-RAY
2010-04-14 GLY A:422 A:422 15.0 0.2 T 47.9 -129.7 15.0 0.2 0.0 HOH
2.778
O
O
3l2m 1 P00690 86.09 0.0 X-RAY
2010-04-14 GLY A:422 A:422 15.0 0.2 T 48.0 -135.2 15.0 0.2 0.0 HOH
2.747
O
O
1ua3 1 P00690 86.09 0.0 X-RAY
2003-10-14 GLY A:422 A:422 15.0 0.2 T 45.6 -129.5 15.0 0.2 0.0 HOH
2.783
O
O
1ose 1 P00690 85.89 0.0 X-RAY
1997-04-01 GLY A:422 A:422 16.0 0.213 T 59.5 -127.8 16.0 0.213 0.0 HOH
2.850
O
O
1jfh 1 P00690 86.09 0.0 X-RAY
1998-12-02 GLY A:422 A:422 16.0 0.213 T 59.0 -137.0 16.0 0.213 0.0 HOH
2.702
O
O
1hx0 1 P00690 85.89 0.0 X-RAY
2001-08-08 GLY A:422 A:422 14.0 0.187 T 44.1 -129.5 14.0 0.187 0.0 HOH
2.751
O
O
1wo2 1 P00690 85.89 0.0 X-RAY
2005-03-15 GLY A:422 A:422 16.0 0.213 T 57.4 -128.1 16.0 0.213 0.0 HOH
2.765
O
O
1pif 1 P00690 85.69 0.0 X-RAY
1996-12-07 GLY A:422 A:422 14.0 0.187 T 57.4 -133.7 14.0 0.187 0.0 HOH
2.795
O
O
1pig 1 P00690 85.69 0.0 X-RAY
1996-12-07 GLY A:422 A:422 16.0 0.213 T 53.0 -128.0 16.0 0.213 0.0 HOH
2.772
O
O
4x0n 1 P00690 85.69 0.0 X-RAY
2015-11-25 GLY A:422 A:422 15.0 0.2 T 45.3 -130.5 15.0 0.2 0.0 HOH
2.718
O
O
1bvn 1 P00690 85.48 0.0 X-RAY
1998-09-23 GLY A:422 P:422 17.0 0.227 T 61.3 -153.3 17.0 0.227 0.0 HOH
3.027
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p0dte7-f1 1 P0DTE7 100.0 0.0 GLY A:437 A:437 13.0 0.173 T 48.3 -125.4
af-p0dte8-f1 1 P0DTE8 100.0 0.0 GLY A:437 A:437 13.0 0.173 T 48.2 -125.3
af-p0dub6-f1 1 P0DUB6 100.0 0.0 GLY A:437 A:437 13.0 0.173 T 51.0 -122.4
af-p19961-f1 1 P19961 97.46 0.0 GLY A:437 A:437 14.0 0.187 T 48.1 -125.3
af-p04746-f1 1 P04746 96.87 0.0 GLY A:437 A:437 13.0 0.173 T 51.6 -125.1