Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110199027 . G A CCDS806.1:NM_147148.2:c.16Ggg>Agg_NP_671489.1:p.6G>R Homo sapiens glutathione S-transferase mu 4 (GSTM4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4gtu 1 Q03013 100.0 5e-165 X-RAY
 2000-01-14 GLY A:5 A:5 0.0 0.0 E -123.3 126.0 0.0 0.0 0.0
GLY B:5 B:5 0.0 0.0 E -114.6 149.2 0.0 0.0 0.0
GLY C:5 C:5 0.0 0.0 E -145.9 125.1 NA NA NA
GLY D:5 D:5 0.0 0.0 E -129.5 127.6 NA NA NA
GLY E:5 E:5 0.0 0.0 E -140.3 107.6 NA NA NA
GLY F:5 F:5 0.0 0.0 E -98.3 127.8 NA NA NA
GLY G:5 G:5 1.0 0.013 E -133.3 147.7 NA NA NA
GLY H:5 H:5 0.0 0.0 E -109.5 134.3 NA NA NA
1xw6 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 GLY A:6 A:5 0.0 0.0 E -110.8 134.2 0.0 0.0 0.0 GSH
HOH
 8.529
3.884
 O
C
 N3
O
GLY B:6 B:5 0.0 0.0 E -111.2 134.5 0.0 0.0 0.0 GSH
HOH
 8.473
3.872
 O
C
 O12
O
GLY C:6 C:5 0.0 0.0 E -110.7 134.9 NA NA NA
GLY D:6 D:5 0.0 0.0 E -109.9 135.6 NA NA NA
1xwk 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 GLY A:6 A:5 0.0 0.0 E -95.6 134.8 0.0 0.0 0.0 GDN
HOH
 8.435
3.889
 O
C
 CA3
O
GLY B:6 B:5 0.0 0.0 E -104.0 143.8 NA NA NA
GLY C:6 C:5 0.0 0.0 E -94.7 136.7 0.0 0.0 0.0 GDN
HOH
 8.351
8.227
 O
CA
 CA3
O
1yj6 1 P09488 86.7 6e-145 X-RAY
 2005-02-01 GLY A:6 A:5 0.0 0.0 E -87.0 137.9 0.0 0.0 0.0 GSH
HOH
 8.678
7.215
 O
O
 N3
O
GLY B:6 B:5 0.0 0.0 E -85.8 142.6 0.0 0.0 0.0 GSH
 8.805
 O
 O2
GLY C:6 C:5 0.0 0.0 E -96.2 143.5 NA NA NA
2f3m 1 P09488 86.7 6e-145 X-RAY
 2006-04-25 GLY A:6 A:5 0.0 0.0 E -102.4 136.2 0.0 0.0 0.0 GTD
HOH
 8.570
7.256
 O
O
 O11
O
GLY B:6 B:5 0.0 0.0 E -100.2 134.4 0.0 0.0 0.0 GTD
HOH
 8.402
7.165
 O
O
 O2
O
GLY C:6 C:5 0.0 0.0 E -99.3 134.4 NA NA NA
GLY D:6 D:5 0.0 0.0 E -100.8 134.6 NA NA NA
GLY E:6 E:5 0.0 0.0 E -99.2 134.6 NA NA NA
GLY F:6 F:5 0.0 0.0 E -101.2 134.9 NA NA NA
7beu 1 P09488 86.7 6e-145 X-RAY
 2022-01-12 GLY A:6 A:5 0.0 0.0 E -103.9 130.8 0.0 0.0 0.0 HOH
 3.827
 C
 O
GLY B:6 B:5 0.0 0.0 E -105.6 130.7 NA NA NA
GLY C:6 C:5 0.0 0.0 E -106.2 131.6 NA NA NA
GLY D:6 D:5 0.0 0.0 E -101.9 132.4 0.0 0.0 0.0 HOH
 3.779
 C
 O
1gtu 1 P09488 87.04 3e-144 X-RAY
 1999-02-02 GLY A:5 A:5 0.0 0.0 E -104.2 133.4 0.0 0.0 0.0 HOH
 7.280
 O
 O
GLY B:5 B:5 0.0 0.0 E -108.5 133.3 0.0 0.0 0.0 HOH
 7.158
 O
 O
GLY C:5 C:5 0.0 0.0 E -101.6 138.9 NA NA NA
GLY D:5 D:5 0.0 0.0 E -107.9 135.7 NA NA NA
2c4j 1 P28161 82.57 5e-139 X-RAY
 2005-10-26 GLY A:6 A:6 0.0 0.0 E -102.7 131.0 0.0 0.0 0.0 GSO
HOH
 8.302
3.786
 O
C
 CB2
O
GLY B:6 B:6 0.0 0.0 E -104.2 130.6 0.0 0.0 0.0 GSO
HOH
 8.299
4.057
 O
C
 CB2
O
GLY C:6 C:6 0.0 0.0 E -102.2 131.8 NA NA NA
GLY D:6 D:6 0.0 0.0 E -103.3 130.2 NA NA NA
1xw5 1 P28161 83.33 6e-139 X-RAY
 2004-11-30 GLY A:5 A:5 0.0 0.0 E -105.3 133.9 0.0 0.0 0.0 GSH
HOH
 8.488
3.839
 O
C
 N3
O
GLY B:5 B:5 0.0 0.0 E -98.5 138.6 0.0 0.0 0.0 GSH
HOH
 8.417
3.916
 O
C
 CB2
O
1ykc 1 P28161 83.33 6e-139 X-RAY
 2005-01-25 GLY A:5 A:5 0.0 0.0 E -106.5 139.2 0.0 0.0 0.0 GDS
HOH
 8.606
3.751
 O
C
 CB5
O
GLY B:5 B:5 0.0 0.0 E -110.0 134.1 0.0 0.0 0.0 GDS
HOH
 8.520
3.887
 O
C
 CB5
O
2ab6 1 P28161 83.33 6e-139 X-RAY
 2005-08-02 GLY A:5 A:5 0.0 0.0 E -99.9 126.2 0.0 0.0 0.0 GSM
HOH
 8.558
3.607
 O
C
 CB2
O
GLY B:5 B:5 0.0 0.0 E -99.4 129.6 0.0 0.0 0.0 GSM
HOH
 8.612
3.862
 O
C
 CB2
O
GLY C:5 C:5 0.0 0.0 E -100.7 130.2 NA NA NA
GLY D:5 D:5 0.0 0.0 E -96.6 127.8 NA NA NA
2gtu 1 P28161 83.33 6e-139 X-RAY
 1999-03-02 GLY A:5 A:5 0.0 0.0 E -107.3 135.5 0.0 0.0 0.0 HOH
 3.963
 C
 O
GLY B:5 B:5 0.0 0.0 E -105.0 130.9 0.0 0.0 0.0 HOH
 3.645
 C
 O
3gtu 1 P28161 83.33 6e-139 X-RAY
 1999-07-29 GLY A:5 A:5 0.0 0.0 E -113.9 126.4 0.0 0.0 0.0 HOH
 7.297
 O
 O
GLY C:5 C:5 0.0 0.0 E -120.5 126.2 NA NA NA
3gur 1 P28161 83.33 6e-139 X-RAY
 2009-10-27 GLY A:5 A:5 0.0 0.0 E -105.6 130.9 0.0 0.0 0.0 BYG
HOH
 8.301
4.383
 O
C
 CB2
O
GLY B:5 B:5 0.0 0.0 E -101.2 124.7 0.0 0.0 0.0 GSH
HOH
 8.105
6.956
 O
O
 CB2
O
GLY C:5 C:5 0.0 0.0 E -121.9 129.7 NA NA NA
GLY D:5 D:5 0.0 0.0 E -112.4 134.4 NA NA NA
5hwl 1 P28161 83.33 6e-139 X-RAY
 2017-11-08 GLY A:5 A:5 0.0 0.0 E -110.6 128.5 0.0 0.0 0.0 GSH
HOH
 8.402
4.007
 O
C
 CB2
O
GLY B:5 B:5 0.0 0.0 E -110.9 133.1 0.0 0.0 0.0 GSH
HOH
 8.571
3.883
 O
C
 CB2
O
1hna 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 GLY A:5 A:5 0.0 0.0 E -111.5 138.2 0.0 0.0 0.0 GDN
HOH
 8.727
7.327
 O
O
 N2
O
1hnb 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 GLY A:5 A:5 0.0 0.0 E -152.9 131.7 0.0 0.0 0.0 GDN
 7.480
 O
 O2
GLY B:5 B:5 1.0 0.013 160.6 103.8 1.0 0.013 0.0 GDN
 7.879
 O
 O2
1hnc 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 GLY A:5 A:5 0.0 0.0 E -136.6 148.6 0.0 0.0 0.0 GDN
 7.643
 O
 O2
GLY B:5 B:5 0.0 0.0 E -122.5 140.2 0.0 0.0 0.0 GDN
 7.921
 O
 O2
GLY C:5 C:5 0.0 0.0 E -131.5 127.0 NA NA NA
GLY D:5 D:5 0.0 0.0 E -115.2 132.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03013-f1 1 Q03013 100.0 3e-166 GLY A:6 A:6 0.0 0.0 E -102.8 123.7
af-p09488-f1 1 P09488 86.7 3e-145 GLY A:6 A:6 0.0 0.0 E -101.5 124.1
af-p28161-f1 1 P28161 83.03 6e-140 GLY A:6 A:6 0.0 0.0 E -101.4 122.9
af-p46439-f1 1 P46439 83.03 1e-134 GLY A:6 A:6 0.0 0.0 E -103.3 123.5