Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 110199350 | . | G | A | CCDS806.1:NM_147148.2:c.53cGc>cAc_NP_671489.1:p.18R>H | Homo sapiens glutathione S-transferase mu 4 (GSTM4), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4gtu | 1 | Q03013 | 100.0 | 5e-165 |
X-RAY |
2000-01-14 | ARG | A:17 | A:17 | 3.0 | 0.013 | H | -69.7 | -20.0 | 3.0 | 0.013 | 0.0 | ||||||
ARG | B:17 | B:17 | 3.0 | 0.013 | H | -57.6 | -28.7 | 3.0 | 0.013 | 0.0 | |||||||||||||
ARG | C:17 | C:17 | 12.0 | 0.053 | H | -55.7 | -36.7 | NA | NA | NA | |||||||||||||
ARG | D:17 | D:17 | 0.0 | 0.0 | H | -58.3 | -33.7 | NA | NA | NA | |||||||||||||
ARG | E:17 | E:17 | 4.0 | 0.018 | H | -54.7 | -22.2 | NA | NA | NA | |||||||||||||
ARG | F:17 | F:17 | 8.0 | 0.036 | H | -62.4 | -35.5 | NA | NA | NA | |||||||||||||
ARG | G:17 | G:17 | 6.0 | 0.027 | H | -64.2 | -29.9 | NA | NA | NA | |||||||||||||
ARG | H:17 | H:17 | 0.0 | 0.0 | H | -52.3 | -47.1 | NA | NA | NA | |||||||||||||
1xw6 | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2004-12-21 | ARG | A:18 | A:17 | 2.0 | 0.009 | H | -57.0 | -47.6 | 2.0 | 0.009 | 0.0 |
HOH |
2.640 |
NH1 |
O |
||
ARG | B:18 | B:17 | 1.0 | 0.004 | H | -57.4 | -48.3 | 1.0 | 0.004 | 0.0 |
HOH |
2.627 |
NH1 |
O |
|||||||||
ARG | C:18 | C:17 | 1.0 | 0.004 | H | -59.1 | -47.1 | NA | NA | NA | |||||||||||||
ARG | D:18 | D:17 | 2.0 | 0.009 | H | -57.9 | -47.8 | NA | NA | NA | |||||||||||||
1xwk | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2004-12-21 | ARG | A:18 | A:17 | 0.0 | 0.0 | H | -56.9 | -48.2 | 0.0 | 0.0 | 0.0 |
HOH |
3.657 |
NH2 |
O |
||
ARG | B:18 | B:17 | 0.0 | 0.0 | H | -54.3 | -49.8 | NA | NA | NA | |||||||||||||
ARG | C:18 | C:17 | 0.0 | 0.0 | H | -55.7 | -46.3 | 0.0 | 0.0 | 0.0 |
HOH |
4.528 |
CD |
O |
|||||||||
1yj6 | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2005-02-01 | ARG | A:18 | A:17 | 2.0 | 0.009 | H | -53.1 | -51.9 | 2.0 | 0.009 | 0.0 |
HOH |
2.656 |
NH1 |
O |
||
ARG | B:18 | B:17 | 1.0 | 0.004 | H | -51.6 | -52.8 | 1.0 | 0.004 | 0.0 |
HOH |
2.873 |
NH1 |
O |
|||||||||
ARG | C:18 | C:17 | 0.0 | 0.0 | H | -55.9 | -53.9 | NA | NA | NA | |||||||||||||
2f3m | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2006-04-25 | ARG | A:18 | A:17 | 1.0 | 0.004 | H | -58.0 | -58.5 | 1.0 | 0.004 | 0.0 |
GTD HOH |
9.857 8.893 |
NH2 CB |
O21 O |
||
ARG | B:18 | B:17 | 0.0 | 0.0 | H | -56.2 | -57.4 | 0.0 | 0.0 | 0.0 |
GTD HOH |
9.866 2.544 |
NH2 NH1 |
O21 O |
|||||||||
ARG | C:18 | C:17 | 1.0 | 0.004 | H | -57.0 | -56.7 | NA | NA | NA | |||||||||||||
ARG | D:18 | D:17 | 0.0 | 0.0 | H | -58.3 | -56.6 | NA | NA | NA | |||||||||||||
ARG | E:18 | E:17 | 0.0 | 0.0 | H | -57.2 | -57.3 | NA | NA | NA | |||||||||||||
ARG | F:18 | F:17 | 1.0 | 0.004 | H | -56.0 | -56.6 | NA | NA | NA | |||||||||||||
7beu | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2022-01-12 | ARG | A:18 | A:17 | 0.0 | 0.0 | H | -54.2 | -45.8 | 0.0 | 0.0 | 0.0 |
HOH |
2.858 |
NH2 |
O |
||
ARG | B:18 | B:17 | 1.0 | 0.004 | H | -53.8 | -46.5 | NA | NA | NA | |||||||||||||
ARG | C:18 | C:17 | 2.0 | 0.009 | H | -57.6 | -44.8 | NA | NA | NA | |||||||||||||
ARG | D:18 | D:17 | 1.0 | 0.004 | H | -58.3 | -42.9 | 1.0 | 0.004 | 0.0 |
HOH |
2.861 |
NH1 |
O |
|||||||||
1gtu | 1 | P09488 | 87.04 | 3e-144 |
X-RAY |
1999-02-02 | ARG | A:17 | A:17 | 0.0 | 0.0 | H | -58.8 | -52.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.132 |
CD |
O |
||
ARG | B:17 | B:17 | 1.0 | 0.004 | H | -58.5 | -43.9 | 1.0 | 0.004 | 0.0 |
HOH |
3.557 |
CD |
O |
|||||||||
ARG | C:17 | C:17 | 0.0 | 0.0 | H | -61.6 | -51.5 | NA | NA | NA | |||||||||||||
ARG | D:17 | D:17 | 1.0 | 0.004 | H | -55.5 | -48.0 | NA | NA | NA | |||||||||||||
2c4j | 1 | P28161 | 82.57 | 5e-139 |
X-RAY |
2005-10-26 | ARG | A:18 | A:18 | 3.0 | 0.013 | H | -59.0 | -46.2 | 3.0 | 0.013 | 0.0 |
GSO HOH |
9.764 2.830 |
NH1 NH1 |
OF2 O |
||
ARG | B:18 | B:18 | 1.0 | 0.004 | H | -55.9 | -45.3 | 1.0 | 0.004 | 0.0 |
GSO HOH |
9.822 2.745 |
NH1 NH2 |
OF2 O |
|||||||||
ARG | C:18 | C:18 | 1.0 | 0.004 | H | -57.6 | -46.0 | NA | NA | NA | |||||||||||||
ARG | D:18 | D:18 | 0.0 | 0.0 | H | -58.3 | -45.2 | NA | NA | NA | |||||||||||||
1xw5 | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2004-11-30 | ARG | A:17 | A:17 | 1.0 | 0.004 | H | -59.7 | -44.2 | 1.0 | 0.004 | 0.0 |
HOH |
2.810 |
NH1 |
O |
||
ARG | B:17 | B:17 | 0.0 | 0.0 | H | -59.4 | -43.2 | 0.0 | 0.0 | 0.0 |
HOH |
2.811 |
NH1 |
O |
|||||||||
1ykc | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2005-01-25 | ARG | A:17 | A:17 | 1.0 | 0.004 | H | -58.5 | -40.8 | 1.0 | 0.004 | 0.0 |
GDS HOH |
9.549 2.830 |
NH1 NH1 |
OE3 O |
||
ARG | B:17 | B:17 | 1.0 | 0.004 | H | -58.2 | -45.3 | 1.0 | 0.004 | 0.0 |
GDS HOH |
9.567 2.824 |
NH1 NH1 |
OE3 O |
|||||||||
2ab6 | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2005-08-02 | ARG | A:17 | A:17 | 1.0 | 0.004 | H | -60.2 | -44.1 | 1.0 | 0.004 | 0.0 |
HOH |
3.304 |
CD |
O |
||
ARG | B:17 | B:17 | 0.0 | 0.0 | H | -58.9 | -43.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.472 |
NH2 |
O |
|||||||||
ARG | C:17 | C:17 | 0.0 | 0.0 | H | -60.5 | -43.8 | NA | NA | NA | |||||||||||||
ARG | D:17 | D:17 | 1.0 | 0.004 | H | -55.6 | -46.5 | NA | NA | NA | |||||||||||||
2gtu | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
1999-03-02 | ARG | A:17 | A:17 | 0.0 | 0.0 | H | -56.6 | -48.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.684 |
NH2 |
O |
||
ARG | B:17 | B:17 | 0.0 | 0.0 | H | -55.0 | -41.2 | 0.0 | 0.0 | 0.0 |
HOH |
2.660 |
NH1 |
O |
|||||||||
3gtu | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
1999-07-29 | ARG | A:17 | A:17 | 1.0 | 0.004 | H | -53.7 | -49.3 | 1.0 | 0.004 | 0.0 |
HOH |
9.396 |
NH1 |
O |
||
ARG | C:17 | C:17 | 1.0 | 0.004 | H | -57.8 | -45.0 | NA | NA | NA | |||||||||||||
3gur | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2009-10-27 | ARG | A:17 | A:17 | 2.0 | 0.009 | H | -63.7 | -37.8 | 2.0 | 0.009 | 0.0 |
BYG HOH |
9.029 2.908 |
NH2 NH2 |
CF5 O |
||
ARG | B:17 | B:17 | 1.0 | 0.004 | H | -56.6 | -38.7 | 1.0 | 0.004 | 0.0 |
GSH HOH |
9.858 2.794 |
NH2 NH2 |
SG2 O |
|||||||||
ARG | C:17 | C:17 | 1.0 | 0.004 | H | -54.4 | -48.3 | NA | NA | NA | |||||||||||||
ARG | D:17 | D:17 | 1.0 | 0.004 | H | -57.0 | -48.1 | NA | NA | NA | |||||||||||||
5hwl | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2017-11-08 | ARG | A:17 | A:17 | 5.0 | 0.022 | H | -55.8 | -49.9 | 5.0 | 0.022 | 0.0 |
NNE HOH |
9.292 2.788 |
NH1 NH1 |
CBN O |
||
ARG | B:17 | B:17 | 2.0 | 0.009 | H | -56.7 | -49.1 | 2.0 | 0.009 | 0.0 |
NNE HOH |
9.366 2.965 |
NH1 NH1 |
CAN O |
|||||||||
1hna | 1 | P28161 | 82.87 | 9e-138 |
X-RAY |
1994-01-31 | ARG | A:17 | A:17 | 0.0 | 0.0 | H | -57.7 | -44.1 | 0.0 | 0.0 | 0.0 |
HOH |
2.811 |
NH1 |
O |
||
1hnb | 1 | P28161 | 82.87 | 9e-138 |
X-RAY |
1994-01-31 | ARG | A:17 | A:17 | 22.0 | 0.098 | H | -73.8 | -38.0 | 22.0 | 0.098 | 0.0 | ||||||
ARG | B:17 | B:17 | 15.0 | 0.067 | H | -57.3 | -55.0 | 15.0 | 0.067 | 0.0 | |||||||||||||
1hnc | 1 | P28161 | 82.87 | 9e-138 |
X-RAY |
1994-01-31 | ARG | A:17 | A:17 | 8.0 | 0.036 | H | -55.9 | -47.0 | 8.0 | 0.036 | 0.0 | ||||||
ARG | B:17 | B:17 | 5.0 | 0.022 | H | -49.3 | -42.3 | 5.0 | 0.022 | 0.0 | |||||||||||||
ARG | C:17 | C:17 | 1.0 | 0.004 | H | -60.0 | -32.2 | NA | NA | NA | |||||||||||||
ARG | D:17 | D:17 | 1.0 | 0.004 | H | -51.5 | -40.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q03013-f1 | 1 | Q03013 | 100.0 | 3e-166 | ARG | A:18 | A:18 | 0.0 | 0.0 | H | -58.9 | -47.1 | |
af-p09488-f1 | 1 | P09488 | 86.7 | 3e-145 | ARG | A:18 | A:18 | 1.0 | 0.004 | H | -58.7 | -47.1 | |
af-p28161-f1 | 1 | P28161 | 83.03 | 6e-140 | ARG | A:18 | A:18 | 0.0 | 0.0 | H | -59.2 | -47.1 | |
af-p46439-f1 | 1 | P46439 | 83.03 | 1e-134 | ARG | A:18 | A:18 | 0.0 | 0.0 | H | -57.4 | -49.4 |