Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110200268 . C A CCDS806.1:NM_147148.2:c.234tgC>tgA_NP_671489.1:p.78C>* Homo sapiens glutathione S-transferase mu 4 (GSTM4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4gtu 1 Q03013 100.0 5e-165 X-RAY
 2000-01-14 CYS A:77 A:77 44.0 0.326 H -55.6 -37.9 23.0 0.17 0.156 B:Q03013:0.156
CYS B:77 B:77 24.0 0.178 H -47.6 -55.4 16.0 0.119 0.059 A:Q03013:0.059
CYS C:77 C:77 43.0 0.319 H -54.3 -53.9 NA NA NA
CYS D:77 D:77 29.0 0.215 H -60.2 -23.8 NA NA NA
CYS E:77 E:77 32.0 0.237 H -62.4 -24.3 NA NA NA
CYS F:77 F:77 21.0 0.156 H -55.3 -42.1 NA NA NA
CYS G:77 G:77 37.0 0.274 H -48.8 -51.7 NA NA NA
CYS H:77 H:77 32.0 0.237 H -49.8 -51.1 NA NA NA
1xw6 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 CYS A:78 A:77 23.0 0.17 H -62.6 -41.6 9.0 0.067 0.103 B:P09488:0.104
 HOH
 3.742
 SG
 O
CYS B:78 B:77 26.0 0.193 H -63.6 -40.8 9.0 0.067 0.126 A:P09488:0.126
 HOH
 4.014
 SG
 O
CYS C:78 C:77 23.0 0.17 H -64.4 -38.3 NA NA NA
CYS D:78 D:77 22.0 0.163 H -64.9 -38.7 NA NA NA
1xwk 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 CYS A:78 A:77 13.0 0.096 H -59.6 -39.5 2.0 0.015 0.081 C:P09488:0.081
 HOH
 5.354
 CB
 O
CYS B:78 B:77 14.0 0.104 H -61.8 -38.0 NA NA NA
CYS C:78 C:77 13.0 0.096 H -64.4 -39.5 3.0 0.022 0.074 A:P09488:0.074
 HOH
 5.743
 CB
 O
1yj6 1 P09488 86.7 6e-145 X-RAY
 2005-02-01 CYS A:78 A:77 17.0 0.126 H -60.8 -37.7 5.0 0.037 0.089 B:P09488:0.089
 HOH
 4.894
 SG
 O
CYS B:78 B:77 16.0 0.119 H -65.2 -37.0 5.0 0.037 0.082 A:P09488:0.081
 HOH
 4.630
 SG
 O
CYS C:78 C:77 18.0 0.133 H -61.0 -38.0 NA NA NA
2f3m 1 P09488 86.7 6e-145 X-RAY
 2006-04-25 CYS A:78 A:77 24.0 0.178 H -72.2 -34.6 13.0 0.096 0.082 B:P09488:0.081
 HOH
 4.446
 SG
 O
CYS B:78 B:77 26.0 0.193 H -71.6 -29.0 15.0 0.111 0.082 A:P09488:0.081
 HOH
 6.188
 SG
 O
CYS C:78 C:77 22.0 0.163 H -67.8 -33.9 NA NA NA
CYS D:78 D:77 24.0 0.178 H -68.8 -34.5 NA NA NA
CYS E:78 E:77 24.0 0.178 H -72.7 -32.5 NA NA NA
CYS F:78 F:77 25.0 0.185 H -72.9 -28.1 NA NA NA
7beu 1 P09488 86.7 6e-145 X-RAY
 2022-01-12 CYS A:78 A:77 20.0 0.148 H -61.6 -38.6 7.0 0.052 0.096 D:P09488:0.096
 NA
HOH
 3.954
3.893
 CB
SG
 NA
O
CYS B:78 B:77 23.0 0.17 H -63.1 -38.8 NA NA NA
CYS C:78 C:77 21.0 0.156 H -63.9 -36.0 NA NA NA
CYS D:78 D:77 24.0 0.178 H -57.9 -42.8 9.0 0.067 0.111 A:P09488:0.111
 NA
HOH
 8.598
3.663
 SG
SG
 NA
O
1gtu 1 P09488 87.04 3e-144 X-RAY
 1999-02-02 CYS A:77 A:77 24.0 0.178 H -63.5 -42.5 12.0 0.089 0.089 B:P09488:0.089
 HOH
 4.181
 CB
 O
CYS B:77 B:77 24.0 0.178 H -65.6 -38.8 11.0 0.081 0.097 A:P09488:0.096
 HOH
 3.780
 SG
 O
CYS C:77 C:77 23.0 0.17 H -55.8 -42.3 NA NA NA
CYS D:77 D:77 25.0 0.185 H -65.1 -36.1 NA NA NA
2c4j 1 P28161 82.57 5e-139 X-RAY
 2005-10-26 ARG A:78 A:78 57.0 0.253 H -64.7 -36.2 15.0 0.067 0.186 B:P28161:0.187
 HOH
 2.997
 NH1
 O
ARG B:78 B:78 59.0 0.262 H -64.5 -35.2 15.0 0.067 0.195 A:P28161:0.196
 HOH
 2.975
 NH1
 O
ARG C:78 C:78 58.0 0.258 H -62.6 -39.6 NA NA NA
ARG D:78 D:78 57.0 0.253 H -63.1 -38.4 NA NA NA
1xw5 1 P28161 83.33 6e-139 X-RAY
 2004-11-30 ARG A:77 A:77 57.0 0.253 H -66.5 -40.1 15.0 0.067 0.186 B:P28161:0.187
 HOH
 2.801
 NH1
 O
ARG B:77 B:77 54.0 0.24 H -65.0 -38.8 14.0 0.062 0.178 A:P28161:0.178
 HOH
 2.914
 NH1
 O
1ykc 1 P28161 83.33 6e-139 X-RAY
 2005-01-25 ARG A:77 A:77 56.0 0.249 H -59.2 -41.2 14.0 0.062 0.187 B:P28161:0.187
 HOH
 2.872
 NH1
 O
ARG B:77 B:77 57.0 0.253 H -59.5 -35.7 13.0 0.058 0.195 A:P28161:0.196
 HOH
 2.868
 NH1
 O
2ab6 1 P28161 83.33 6e-139 X-RAY
 2005-08-02 ARG A:77 A:77 54.0 0.24 H -66.7 -41.4 11.0 0.049 0.191 B:P28161:0.191
 HOH
 5.872
 NH1
 O
ARG B:77 B:77 54.0 0.24 H -65.4 -41.2 13.0 0.058 0.182 A:P28161:0.182
 HOH
 3.498
 NH1
 O
ARG C:77 C:77 59.0 0.262 H -70.2 -38.9 NA NA NA
ARG D:77 D:77 56.0 0.249 H -65.5 -42.6 NA NA NA
2gtu 1 P28161 83.33 6e-139 X-RAY
 1999-03-02 ARG A:77 A:77 58.0 0.258 H -61.7 -37.3 17.0 0.076 0.182 B:P28161:0.182
 HOH
 3.029
 NH1
 O
ARG B:77 B:77 58.0 0.258 H -55.3 -42.0 15.0 0.067 0.191 A:P28161:0.191
 HOH
 2.833
 NH1
 O
3gtu 1 P28161 83.33 6e-139 X-RAY
 1999-07-29 ARG A:77 A:77 59.0 0.262 H -64.8 -29.0 15.0 0.067 0.195 B:P21266:0.196
 HOH
 3.664
 NE
 O
ARG C:77 C:77 64.0 0.284 H -55.1 -40.9 NA NA NA
3gur 1 P28161 83.33 6e-139 X-RAY
 2009-10-27 ARG A:77 A:77 63.0 0.28 H -63.8 -28.6 19.0 0.084 0.196 B:P28161:0.196
 HOH
 2.493
 NH2
 O
ARG B:77 B:77 53.0 0.236 H -60.9 -29.6 9.0 0.04 0.196 A:P28161:0.196
 HOH
 3.017
 NH1
 O
ARG C:77 C:77 56.0 0.249 H -62.0 -36.1 NA NA NA
ARG D:77 D:77 55.0 0.244 H -73.8 -34.8 NA NA NA
5hwl 1 P28161 83.33 6e-139 X-RAY
 2017-11-08 ARG A:77 A:77 62.0 0.276 H -64.4 -37.0 18.0 0.08 0.196 B:P28161:0.196
 HOH
 2.893
 NH1
 O
ARG B:77 B:77 60.0 0.267 H -67.6 -36.3 17.0 0.076 0.191 A:P28161:0.191
 HOH
 2.955
 NH1
 O
1hna 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 ARG A:77 A:77 57.0 0.253 H -61.8 -36.0 17.0 0.076 0.177 A:P28161:0.178
 HOH
 3.131
 NH1
 O
1hnb 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 ARG A:77 A:77 62.0 0.276 H -52.3 -38.8 22.0 0.098 0.178 B:P28161:0.178
ARG B:77 B:77 67.0 0.298 H -58.6 -41.2 17.0 0.076 0.222 A:P28161:0.222
1hnc 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 ARG A:77 A:77 60.0 0.267 H -59.5 -32.7 15.0 0.067 0.2 B:P28161:0.2
ARG B:77 B:77 57.0 0.253 H -66.0 -33.6 12.0 0.053 0.2 A:P28161:0.2
ARG C:77 C:77 63.0 0.28 H -68.4 -39.6 NA NA NA
ARG D:77 D:77 56.0 0.249 H -63.6 -44.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03013-f1 1 Q03013 100.0 3e-166 CYS A:78 A:78 24.0 0.178 H -58.0 -39.3
af-p09488-f1 1 P09488 86.7 3e-145 CYS A:78 A:78 22.0 0.163 H -57.4 -39.8
af-p28161-f1 1 P28161 83.03 6e-140 ARG A:78 A:78 52.0 0.231 H -61.9 -34.9
af-p46439-f1 1 P46439 83.03 1e-134 ARG A:78 A:78 58.0 0.258 H -62.9 -35.3