Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 110200279 | . | G | A | CCDS806.1:NM_147148.2:c.245cGc>cAc_NP_671489.1:p.82R>H | Homo sapiens glutathione S-transferase mu 4 (GSTM4), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4gtu | 1 | Q03013 | 100.0 | 5e-165 |
X-RAY |
2000-01-14 | ARG | A:81 | A:81 | 155.0 | 0.689 | H | -42.5 | -60.3 | 43.0 | 0.191 | 0.498 |
B:Q03013:0.498 |
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ARG | B:81 | B:81 | 152.0 | 0.676 | H | -53.3 | -52.9 | 52.0 | 0.231 | 0.445 |
A:Q03013:0.444 |
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ARG | C:81 | C:81 | 158.0 | 0.702 | H | -50.5 | -57.2 | NA | NA | NA | |||||||||||||
ARG | D:81 | D:81 | 128.0 | 0.569 | H | -71.2 | -31.0 | NA | NA | NA | |||||||||||||
ARG | E:81 | E:81 | 146.0 | 0.649 | H | -66.8 | -29.2 | NA | NA | NA | |||||||||||||
ARG | F:81 | F:81 | 153.0 | 0.68 | H | -59.4 | -49.6 | NA | NA | NA | |||||||||||||
ARG | G:81 | G:81 | 158.0 | 0.702 | H | -53.5 | -40.7 | NA | NA | NA | |||||||||||||
ARG | H:81 | H:81 | 149.0 | 0.662 | H | -58.9 | -51.6 | NA | NA | NA | |||||||||||||
1xw6 | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2004-12-21 | ARG | A:82 | A:81 | 150.0 | 0.667 | H | -60.1 | -35.1 | 48.0 | 0.213 | 0.454 |
B:P09488:0.453 |
HOH |
2.639 |
O |
O |
|
ARG | B:82 | B:81 | 161.0 | 0.716 | H | -63.0 | -35.0 | 52.0 | 0.231 | 0.485 |
A:P09488:0.484 |
HOH |
3.153 |
NH1 |
O |
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ARG | C:82 | C:81 | 156.0 | 0.693 | H | -63.1 | -34.2 | NA | NA | NA | |||||||||||||
ARG | D:82 | D:81 | 158.0 | 0.702 | H | -63.0 | -35.8 | NA | NA | NA | |||||||||||||
1xwk | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2004-12-21 | ARG | A:82 | A:81 | 149.0 | 0.662 | H | -59.7 | -32.6 | 46.0 | 0.204 | 0.458 |
C:P09488:0.458 |
HOH |
3.447 |
NH1 |
O |
|
ARG | B:82 | B:81 | 150.0 | 0.667 | H | -58.1 | -29.4 | NA | NA | NA | |||||||||||||
ARG | C:82 | C:81 | 147.0 | 0.653 | H | -63.4 | -36.0 | 49.0 | 0.218 | 0.435 |
A:P09488:0.436 |
HOH |
3.015 |
O |
O |
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1yj6 | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2005-02-01 | ARG | A:82 | A:81 | 151.0 | 0.671 | H | -56.7 | -36.7 | 50.0 | 0.222 | 0.449 |
B:P09488:0.449 |
HOH |
4.049 |
CA |
O |
|
ARG | B:82 | B:81 | 147.0 | 0.653 | H | -60.1 | -33.5 | 47.0 | 0.209 | 0.444 |
A:P09488:0.444 |
HOH |
6.339 |
NH1 |
O |
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ARG | C:82 | C:81 | 150.0 | 0.667 | H | -56.9 | -31.2 | NA | NA | NA | |||||||||||||
2f3m | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2006-04-25 | ARG | A:82 | A:81 | 152.0 | 0.676 | H | -65.9 | -41.7 | 49.0 | 0.218 | 0.458 |
B:P09488:0.458 |
HOH |
7.010 |
NH1 |
O |
|
ARG | B:82 | B:81 | 154.0 | 0.684 | H | -62.6 | -43.5 | 48.0 | 0.213 | 0.471 |
A:P09488:0.471 |
HOH |
6.189 |
NH1 |
O |
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ARG | C:82 | C:81 | 148.0 | 0.658 | H | -66.4 | -42.8 | NA | NA | NA | |||||||||||||
ARG | D:82 | D:81 | 149.0 | 0.662 | H | -67.1 | -43.0 | NA | NA | NA | |||||||||||||
ARG | E:82 | E:81 | 150.0 | 0.667 | H | -67.2 | -43.0 | NA | NA | NA | |||||||||||||
ARG | F:82 | F:81 | 151.0 | 0.671 | H | -66.1 | -43.9 | NA | NA | NA | |||||||||||||
7beu | 1 | P09488 | 86.7 | 6e-145 |
X-RAY |
2022-01-12 | ARG | A:82 | A:81 | 150.0 | 0.667 | H | -62.0 | -32.5 | 47.0 | 0.209 | 0.458 |
D:P09488:0.458 |
NA HOH |
3.218 2.948 |
NH1 NH2 |
NA O |
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ARG | B:82 | B:81 | 162.0 | 0.72 | H | -67.8 | -26.5 | NA | NA | NA | |||||||||||||
ARG | C:82 | C:81 | 154.0 | 0.684 | H | -62.9 | -32.8 | NA | NA | NA | |||||||||||||
ARG | D:82 | D:81 | 163.0 | 0.724 | H | -59.6 | -29.7 | 57.0 | 0.253 | 0.471 |
A:P09488:0.471 |
NA HOH |
8.627 2.987 |
NH1 NH2 |
NA O |
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1gtu | 1 | P09488 | 87.04 | 3e-144 |
X-RAY |
1999-02-02 | ARG | A:81 | A:81 | 165.0 | 0.733 | H | -59.6 | -33.7 | 59.0 | 0.262 | 0.471 |
B:P09488:0.471 |
HOH |
2.784 |
NH2 |
O |
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ARG | B:81 | B:81 | 163.0 | 0.724 | H | -57.5 | -41.4 | 57.0 | 0.253 | 0.471 |
A:P09488:0.471 |
HOH |
2.964 |
NH2 |
O |
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ARG | C:81 | C:81 | 157.0 | 0.698 | H | -59.8 | -35.2 | NA | NA | NA | |||||||||||||
ARG | D:81 | D:81 | 157.0 | 0.698 | H | -59.8 | -37.5 | NA | NA | NA | |||||||||||||
2c4j | 1 | P28161 | 82.57 | 5e-139 |
X-RAY |
2005-10-26 | ARG | A:82 | A:82 | 157.0 | 0.698 | H | -61.3 | -38.5 | 50.0 | 0.222 | 0.476 |
B:P28161:0.476 |
HOH |
2.901 |
NH2 |
O |
|
ARG | B:82 | B:82 | 149.0 | 0.662 | H | -63.6 | -40.6 | 41.0 | 0.182 | 0.48 |
A:P28161:0.48 |
HOH |
2.669 |
O |
O |
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ARG | C:82 | C:82 | 155.0 | 0.689 | H | -63.1 | -35.5 | NA | NA | NA | |||||||||||||
ARG | D:82 | D:82 | 146.0 | 0.649 | H | -62.5 | -39.5 | NA | NA | NA | |||||||||||||
1xw5 | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2004-11-30 | ARG | A:81 | A:81 | 159.0 | 0.707 | H | -60.2 | -25.3 | 52.0 | 0.231 | 0.476 |
B:P28161:0.476 |
HOH |
2.948 |
NH2 |
O |
|
ARG | B:81 | B:81 | 155.0 | 0.689 | H | -62.8 | -28.0 | 51.0 | 0.227 | 0.462 |
A:P28161:0.462 |
HOH |
2.718 |
NH2 |
O |
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1ykc | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2005-01-25 | ARG | A:81 | A:81 | 152.0 | 0.676 | H | -63.6 | -35.7 | 49.0 | 0.218 | 0.458 |
B:P28161:0.458 |
HOH |
2.863 |
NH2 |
O |
|
ARG | B:81 | B:81 | 153.0 | 0.68 | H | -62.4 | -35.1 | 48.0 | 0.213 | 0.467 |
A:P28161:0.467 |
HOH |
2.619 |
O |
O |
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2ab6 | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2005-08-02 | ARG | A:81 | A:81 | 157.0 | 0.698 | H | -69.9 | -31.2 | 46.0 | 0.204 | 0.494 |
B:P28161:0.493 |
HOH |
8.922 |
NH1 |
O |
|
ARG | B:81 | B:81 | 153.0 | 0.68 | H | -65.1 | -35.2 | 43.0 | 0.191 | 0.489 |
A:P28161:0.489 |
HOH |
2.595 |
NH1 |
O |
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ARG | C:81 | C:81 | 155.0 | 0.689 | H | -68.8 | -33.9 | NA | NA | NA | |||||||||||||
ARG | D:81 | D:81 | 154.0 | 0.684 | H | -70.0 | -33.1 | NA | NA | NA | |||||||||||||
2gtu | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
1999-03-02 | ARG | A:81 | A:81 | 148.0 | 0.658 | H | -60.4 | -41.5 | 40.0 | 0.178 | 0.48 |
B:P28161:0.48 |
HOH |
3.673 |
NE |
O |
|
ARG | B:81 | B:81 | 152.0 | 0.676 | H | -63.0 | -40.2 | 47.0 | 0.209 | 0.467 |
A:P28161:0.467 |
HOH |
2.897 |
NE |
O |
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3gtu | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
1999-07-29 | ARG | A:81 | A:81 | 158.0 | 0.702 | H | -62.8 | -41.4 | 52.0 | 0.231 | 0.471 |
B:P21266:0.471 |
HOH |
2.642 |
NH2 |
O |
|
ARG | C:81 | C:81 | 159.0 | 0.707 | H | -61.0 | -44.0 | NA | NA | NA | |||||||||||||
3gur | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2009-10-27 | ARG | A:81 | A:81 | 149.0 | 0.662 | H | -61.7 | -37.9 | 41.0 | 0.182 | 0.48 |
B:P28161:0.48 |
HOH |
2.892 |
NH1 |
O |
|
ARG | B:81 | B:81 | 157.0 | 0.698 | H | -67.2 | -30.2 | 49.0 | 0.218 | 0.48 |
A:P28161:0.48 |
HOH |
2.754 |
NH2 |
O |
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ARG | C:81 | C:81 | 157.0 | 0.698 | H | -66.4 | -30.8 | NA | NA | NA | |||||||||||||
ARG | D:81 | D:81 | 155.0 | 0.689 | H | -65.2 | -36.4 | NA | NA | NA | |||||||||||||
5hwl | 1 | P28161 | 83.33 | 6e-139 |
X-RAY |
2017-11-08 | ARG | A:81 | A:81 | 154.0 | 0.684 | H | -60.4 | -31.3 | 51.0 | 0.227 | 0.457 |
B:P28161:0.458 |
HOH |
2.770 |
NH2 |
O |
|
ARG | B:81 | B:81 | 153.0 | 0.68 | H | -63.0 | -33.9 | 50.0 | 0.222 | 0.458 |
A:P28161:0.458 |
HOH |
2.792 |
NH2 |
O |
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1hna | 1 | P28161 | 82.87 | 9e-138 |
X-RAY |
1994-01-31 | ARG | A:81 | A:81 | 154.0 | 0.684 | H | -58.2 | -37.7 | 57.0 | 0.253 | 0.431 |
A:P28161:0.431 |
HOH |
3.100 |
NH1 |
O |
|
1hnb | 1 | P28161 | 82.87 | 9e-138 |
X-RAY |
1994-01-31 | ARG | A:81 | A:81 | 156.0 | 0.693 | H | -53.9 | -43.7 | 54.0 | 0.24 | 0.453 |
B:P28161:0.453 |
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ARG | B:81 | B:81 | 155.0 | 0.689 | H | -81.8 | -32.2 | 61.0 | 0.271 | 0.418 |
A:P28161:0.418 |
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1hnc | 1 | P28161 | 82.87 | 9e-138 |
X-RAY |
1994-01-31 | ARG | A:81 | A:81 | 154.0 | 0.684 | H | -60.7 | -47.6 | 56.0 | 0.249 | 0.435 |
B:P28161:0.436 |
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ARG | B:81 | B:81 | 142.0 | 0.631 | H | -56.1 | -53.9 | 49.0 | 0.218 | 0.413 |
A:P28161:0.413 |
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ARG | C:81 | C:81 | 161.0 | 0.716 | H | -53.6 | -36.6 | NA | NA | NA | |||||||||||||
ARG | D:81 | D:81 | 151.0 | 0.671 | H | -59.3 | -50.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q03013-f1 | 1 | Q03013 | 100.0 | 3e-166 | ARG | A:82 | A:82 | 152.0 | 0.676 | H | -63.0 | -33.8 | |
af-p09488-f1 | 1 | P09488 | 86.7 | 3e-145 | ARG | A:82 | A:82 | 148.0 | 0.658 | H | -63.2 | -34.4 | |
af-p28161-f1 | 1 | P28161 | 83.03 | 6e-140 | ARG | A:82 | A:82 | 149.0 | 0.662 | H | -61.3 | -36.3 | |
af-p46439-f1 | 1 | P46439 | 83.03 | 1e-134 | ARG | A:82 | A:82 | 148.0 | 0.658 | H | -63.4 | -34.1 |