Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110200478 . G A CCDS806.1:NM_147148.2:c.344tGc>tAc_NP_671489.1:p.115C>Y Homo sapiens glutathione S-transferase mu 4 (GSTM4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4gtu 1 Q03013 100.0 5e-165 X-RAY
 2000-01-14 CYS A:114 A:114 0.0 0.0 T -65.7 -7.1 0.0 0.0 0.0
CYS B:114 B:114 1.0 0.007 H -83.2 -20.5 1.0 0.007 0.0
CYS C:114 C:114 0.0 0.0 H -62.2 -19.4 NA NA NA
CYS D:114 D:114 0.0 0.0 H -70.8 -14.7 NA NA NA
CYS E:114 E:114 0.0 0.0 H -63.2 -11.0 NA NA NA
CYS F:114 F:114 0.0 0.0 H -81.3 -4.3 NA NA NA
CYS G:114 G:114 0.0 0.0 H -69.3 -37.6 NA NA NA
CYS H:114 H:114 0.0 0.0 H -68.4 -13.8 NA NA NA
1xw6 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 CYS A:115 A:114 0.0 0.0 H -66.1 -30.3 0.0 0.0 0.0 HOH
 6.396
 N
 O
CYS B:115 B:114 0.0 0.0 H -65.7 -31.7 0.0 0.0 0.0 HOH
 6.228
 N
 O
CYS C:115 C:114 0.0 0.0 H -67.1 -30.4 NA NA NA
CYS D:115 D:114 0.0 0.0 H -65.5 -30.3 NA NA NA
1xwk 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 CYS A:115 A:114 0.0 0.0 H -67.1 -12.4 0.0 0.0 0.0 GDN
HOH
 6.083
7.745
 C
N
 O4B
O
CYS B:115 B:114 0.0 0.0 H -68.2 -15.9 NA NA NA
CYS C:115 C:114 0.0 0.0 H -68.9 -13.3 0.0 0.0 0.0 GDN
HOH
 6.080
6.416
 C
C
 O4B
O
1yj6 1 P09488 86.7 6e-145 X-RAY
 2005-02-01 CYS A:115 A:114 0.0 0.0 H -68.4 -26.7 0.0 0.0 0.0 ZN
HOH
 9.758
7.553
 CB
N
 ZN
O
CYS B:115 B:114 0.0 0.0 H -72.9 -22.2 0.0 0.0 0.0 ZN
HOH
 9.972
6.218
 CB
C
 ZN
O
CYS C:115 C:114 0.0 0.0 H -70.1 -28.5 NA NA NA
2f3m 1 P09488 86.7 6e-145 X-RAY
 2006-04-25 CYS A:115 A:114 0.0 0.0 H -67.6 -10.1 0.0 0.0 0.0 GTD
HOH
 7.845
7.929
 N
C
 O42
O
CYS B:115 B:114 0.0 0.0 H -67.6 -9.9 0.0 0.0 0.0 GTD
HOH
 7.771
9.139
 N
SG
 O42
O
CYS C:115 C:114 0.0 0.0 H -64.3 -12.5 NA NA NA
CYS D:115 D:114 0.0 0.0 H -64.7 -11.6 NA NA NA
CYS E:115 E:114 0.0 0.0 H -68.6 -9.1 NA NA NA
CYS F:115 F:114 0.0 0.0 H -66.7 -10.3 NA NA NA
7beu 1 P09488 86.7 6e-145 X-RAY
 2022-01-12 CYS A:115 A:114 0.0 0.0 H -72.5 -19.1 0.0 0.0 0.0 HOH
 5.860
 C
 O
CYS B:115 B:114 0.0 0.0 H -76.5 -16.7 NA NA NA
CYS C:115 C:114 0.0 0.0 H -71.5 -18.8 NA NA NA
CYS D:115 D:114 0.0 0.0 H -93.0 -12.7 0.0 0.0 0.0 HOH
 7.121
 O
 O
1gtu 1 P09488 87.04 3e-144 X-RAY
 1999-02-02 CYS A:114 A:114 0.0 0.0 H -79.0 -10.8 0.0 0.0 0.0 HOH
 8.661
 CB
 O
CYS B:114 B:114 0.0 0.0 H -78.8 -12.6 0.0 0.0 0.0 HOH
 8.909
 CB
 O
CYS C:114 C:114 0.0 0.0 H -77.1 -15.9 NA NA NA
CYS D:114 D:114 0.0 0.0 H -75.9 -12.3 NA NA NA
2c4j 1 P28161 82.57 5e-139 X-RAY
 2005-10-26 CYS A:115 A:115 0.0 0.0 H -74.3 -19.7 0.0 0.0 0.0 GSO
HOH
 9.835
5.375
 C
O
 CZ
O
CYS B:115 B:115 0.0 0.0 H -70.6 -14.8 0.0 0.0 0.0 GSO
HOH
 9.893
5.779
 CB
C
 OF2
O
CYS C:115 C:115 0.0 0.0 H -72.4 -17.3 NA NA NA
CYS D:115 D:115 0.0 0.0 H -72.3 -16.4 NA NA NA
1xw5 1 P28161 83.33 6e-139 X-RAY
 2004-11-30 CYS A:114 A:114 0.0 0.0 H -63.6 -20.5 0.0 0.0 0.0 HOH
 5.301
 O
 O
CYS B:114 B:114 0.0 0.0 H -66.0 -18.7 0.0 0.0 0.0 HOH
 5.949
 C
 O
1ykc 1 P28161 83.33 6e-139 X-RAY
 2005-01-25 CYS A:114 A:114 0.0 0.0 H -61.2 -19.2 0.0 0.0 0.0 GDS
HOH
 6.987
5.531
 C
C
 OE1
O
CYS B:114 B:114 0.0 0.0 H -71.0 -16.3 0.0 0.0 0.0 GDS
HOH
 6.646
5.573
 C
C
 OE1
O
2ab6 1 P28161 83.33 6e-139 X-RAY
 2005-08-02 CYS A:114 A:114 0.0 0.0 H -78.7 -12.0 0.0 0.0 0.0 HOH
 6.240
 N
 O
CYS B:114 B:114 0.0 0.0 H -74.7 -12.5 0.0 0.0 0.0 HOH
 5.946
 N
 O
CYS C:114 C:114 0.0 0.0 H -75.0 -9.5 NA NA NA
CYS D:114 D:114 0.0 0.0 H -75.3 -10.0 NA NA NA
2gtu 1 P28161 83.33 6e-139 X-RAY
 1999-03-02 CYS A:114 A:114 0.0 0.0 H -75.7 -16.2 0.0 0.0 0.0 HOH
 7.120
 SG
 O
CYS B:114 B:114 0.0 0.0 H -71.4 -11.0 0.0 0.0 0.0 HOH
 7.250
 SG
 O
3gtu 1 P28161 83.33 6e-139 X-RAY
 1999-07-29 CYS A:114 A:114 0.0 0.0 H -65.4 -19.0 0.0 0.0 0.0 HOH
 7.350
 N
 O
CYS C:114 C:114 0.0 0.0 H -64.9 -18.0 NA NA NA
3gur 1 P28161 83.33 6e-139 X-RAY
 2009-10-27 CYS A:114 A:114 0.0 0.0 H -76.5 -13.1 0.0 0.0 0.0 BYG
HOH
 8.125
8.446
 CB
SG
 OA4
O
CYS B:114 B:114 0.0 0.0 H -70.3 -8.3 0.0 0.0 0.0 HOH
 7.063
 SG
 O
CYS C:114 C:114 0.0 0.0 H -73.7 -18.8 NA NA NA
CYS D:114 D:114 0.0 0.0 H -73.2 -14.8 NA NA NA
5hwl 1 P28161 83.33 6e-139 X-RAY
 2017-11-08 CYS A:114 A:114 0.0 0.0 H -69.6 -17.1 0.0 0.0 0.0 NNE
HOH
 8.255
6.137
 C
N
 OBL
O
CYS B:114 B:114 0.0 0.0 H -77.5 -8.7 0.0 0.0 0.0 NNE
HOH
 8.142
6.549
 C
N
 OAA
O
1hna 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 CYS A:114 A:114 0.0 0.0 T -144.6 -59.8 0.0 0.0 0.0 HOH
 6.461
 SG
 O
1hnb 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 CYS A:114 A:114 10.0 0.074 H -65.0 -40.8 10.0 0.074 0.0 GDN
 9.737
 CB
 SG2
CYS B:114 B:114 5.0 0.037 H -73.4 -33.3 5.0 0.037 0.0
1hnc 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 CYS A:114 A:114 26.0 0.193 T -64.1 -3.5 26.0 0.193 0.0
CYS B:114 B:114 3.0 0.022 H -69.6 -38.8 3.0 0.022 0.0 GDN
 8.873
 CB
 SG2
CYS C:114 C:114 10.0 0.074 H -62.2 -15.9 NA NA NA
CYS D:114 D:114 47.0 0.348 H -42.3 -65.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03013-f1 1 Q03013 100.0 3e-166 CYS A:115 A:115 0.0 0.0 H -68.3 -25.5
af-p09488-f1 1 P09488 86.7 3e-145 CYS A:115 A:115 0.0 0.0 H -66.7 -22.0
af-p28161-f1 1 P28161 83.03 6e-140 CYS A:115 A:115 0.0 0.0 H -69.6 -16.3
af-p46439-f1 1 P46439 83.03 1e-134 CYS A:115 A:115 0.0 0.0 H -71.0 -15.7