Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110201493 . C A CCDS806.1:NM_147148.2:c.418Cag>Aag_NP_671489.1:p.140Q>K Homo sapiens glutathione S-transferase mu 4 (GSTM4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4gtu 1 Q03013 100.0 5e-165 X-RAY
 2000-01-14 GLN A:139 A:139 125.0 0.694 H -47.3 -58.0 113.0 0.628 0.066 B:Q03013:0.067
GLN B:139 B:139 139.0 0.772 H -57.5 -31.2 126.0 0.7 0.072 A:Q03013:0.072
GLN C:139 C:139 131.0 0.728 H -66.7 -40.5 NA NA NA
GLN D:139 D:139 127.0 0.706 T -69.0 3.9 NA NA NA
GLN E:139 E:139 128.0 0.711 H -79.2 -28.4 NA NA NA
GLN F:139 F:139 147.0 0.817 H -60.1 -46.4 NA NA NA
GLN G:139 G:139 134.0 0.744 H -57.8 -39.4 NA NA NA
GLN H:139 H:139 136.0 0.756 H -70.7 -24.7 NA NA NA
1xw6 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 GLU A:140 A:139 138.0 0.726 H -63.5 -34.3 137.0 0.721 0.005 B:P09488:0.005
 HOH
 2.728
 O
 O
GLU B:140 B:139 118.0 0.621 H -64.4 -34.7 118.0 0.621 0.0 HOH
 2.767
 O
 O
GLU C:140 C:139 117.0 0.616 H -64.5 -33.4 NA NA NA
GLU D:140 D:139 122.0 0.642 H -62.7 -35.6 NA NA NA
1xwk 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 GLU A:140 A:139 118.0 0.621 H -54.1 -48.5 115.0 0.605 0.016 C:P09488:0.016
 HOH
 2.872
 OE2
 O
GLU B:140 B:139 130.0 0.684 H -56.8 -45.9 NA NA NA
GLU C:140 C:139 126.0 0.663 H -55.6 -44.4 125.0 0.658 0.005 A:P09488:0.005
 HOH
 4.425
 O
 O
1yj6 1 P09488 86.7 6e-145 X-RAY
 2005-02-01 GLU A:140 A:139 124.0 0.653 H -52.0 -46.6 123.0 0.647 0.006 B:P09488:0.005
 HOH
 3.477
 OE1
 O
GLU B:140 B:139 125.0 0.658 H -50.9 -44.0 123.0 0.647 0.011 A:P09488:0.011
 HOH
 3.854
 C
 O
GLU C:140 C:139 113.0 0.595 H -51.2 -47.7 NA NA NA
2f3m 1 P09488 86.7 6e-145 X-RAY
 2006-04-25 GLU A:140 A:139 121.0 0.637 H -60.3 -36.9 120.0 0.632 0.005 B:P09488:0.005
 HOH
 9.164
 N
 O
GLU B:140 B:139 122.0 0.642 H -60.1 -37.6 122.0 0.642 0.0 HOH
 8.744
 OE2
 O
GLU C:140 C:139 122.0 0.642 H -60.4 -37.2 NA NA NA
GLU D:140 D:139 122.0 0.642 H -59.8 -37.2 NA NA NA
GLU E:140 E:139 119.0 0.626 H -59.6 -37.2 NA NA NA
GLU F:140 F:139 123.0 0.647 H -58.8 -37.8 NA NA NA
7beu 1 P09488 86.7 6e-145 X-RAY
 2022-01-12 GLU A:140 A:139 134.0 0.705 H -69.3 -33.8 133.0 0.7 0.005 D:P09488:0.005
 HOH
 2.563
 OE1
 O
GLU B:140 B:139 119.0 0.626 H -71.6 -38.0 NA NA NA
GLU C:140 C:139 125.0 0.658 H -72.9 -29.6 NA NA NA
GLU D:140 D:139 121.0 0.637 H -72.6 -33.4 121.0 0.637 0.0 HOH
 2.318
 OE2
 O
1gtu 1 P09488 87.04 3e-144 X-RAY
 1999-02-02 GLU A:139 A:139 136.0 0.716 H -58.1 -39.5 135.0 0.711 0.005 B:P09488:0.005
GLU B:139 B:139 142.0 0.747 H -60.1 -34.2 142.0 0.747 0.0
GLU C:139 C:139 130.0 0.684 H -57.1 -39.0 NA NA NA
GLU D:139 D:139 137.0 0.721 H -66.7 -34.2 NA NA NA
2c4j 1 P28161 82.57 5e-139 X-RAY
 2005-10-26 GLN A:140 A:140 121.0 0.672 H -60.1 -41.4 117.0 0.65 0.022 B:P28161:0.022
 HOH
 2.658
 O
 O
GLN B:140 B:140 118.0 0.656 H -61.4 -41.9 116.0 0.644 0.012 A:P28161:0.011
 HOH
 2.658
 O
 O
GLN C:140 C:140 122.0 0.678 H -62.5 -40.5 NA NA NA
GLN D:140 D:140 122.0 0.678 H -61.1 -44.4 NA NA NA
1xw5 1 P28161 83.33 6e-139 X-RAY
 2004-11-30 GLN A:139 A:139 121.0 0.672 H -61.9 -41.6 115.0 0.639 0.033 B:P28161:0.033
 HOH
 2.768
 O
 O
GLN B:139 B:139 118.0 0.656 H -62.7 -42.8 112.0 0.622 0.034 A:P28161:0.033
 HOH
 2.624
 OE1
 O
1ykc 1 P28161 83.33 6e-139 X-RAY
 2005-01-25 GLN A:139 A:139 118.0 0.656 H -62.3 -42.1 114.0 0.633 0.023 B:P28161:0.022
 HOH
 2.665
 O
 O
GLN B:139 B:139 126.0 0.7 H -56.2 -40.5 120.0 0.667 0.033 A:P28161:0.033
 HOH
 3.245
 CG
 O
2ab6 1 P28161 83.33 6e-139 X-RAY
 2005-08-02 GLN A:139 A:139 127.0 0.706 H -60.4 -40.7 124.0 0.689 0.017 B:P28161:0.017
 HOH
 6.320
 O
 O
GLN B:139 B:139 128.0 0.711 H -55.3 -44.5 125.0 0.694 0.017 A:P28161:0.017
 HOH
 3.031
 NE2
 O
GLN C:139 C:139 129.0 0.717 H -59.0 -42.5 NA NA NA
GLN D:139 D:139 127.0 0.706 H -58.6 -41.8 NA NA NA
2gtu 1 P28161 83.33 6e-139 X-RAY
 1999-03-02 GLN A:139 A:139 133.0 0.739 H -46.9 -49.1 95.0 0.528 0.211 B:P28161:0.211
 HOH
 7.470
 OE1
 O
GLN B:139 B:139 131.0 0.728 H -55.6 -49.1 93.0 0.517 0.211 A:P28161:0.211
 HOH
 7.263
 OE1
 O
3gtu 1 P28161 83.33 6e-139 X-RAY
 1999-07-29 GLN A:139 A:139 128.0 0.711 H -59.0 -44.9 128.0 0.711 0.0 HOH
 8.900
 NE2
 O
GLN C:139 C:139 128.0 0.711 H -57.4 -47.9 NA NA NA
3gur 1 P28161 83.33 6e-139 X-RAY
 2009-10-27 GLN A:139 A:139 126.0 0.7 H -63.5 -32.7 124.0 0.689 0.011 B:P28161:0.011
 HOH
 3.704
 CB
 O
GLN B:139 B:139 125.0 0.694 H -52.3 -30.5 122.0 0.678 0.016 A:P28161:0.017
 HOH
 2.634
 O
 O
GLN C:139 C:139 133.0 0.739 H -50.4 -44.5 NA NA NA
GLN D:139 D:139 130.0 0.722 H -62.0 -36.5 NA NA NA
5hwl 1 P28161 83.33 6e-139 X-RAY
 2017-11-08 GLN A:139 A:139 139.0 0.772 H -60.9 -41.6 137.0 0.761 0.011 B:P28161:0.011
 HOH
 2.688
 O
 O
GLN B:139 B:139 117.0 0.65 H -69.5 -31.7 117.0 0.65 0.0 HOH
 2.737
 O
 O
1hna 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 GLN A:139 A:139 126.0 0.7 H -53.7 -50.5 86.0 0.478 0.222 A:P28161:0.222
 HOH
 4.088
 OE1
 O
1hnb 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 GLN A:139 A:139 153.0 0.85 H -84.9 -47.7 136.0 0.756 0.094 B:P28161:0.094
GLN B:139 B:139 129.0 0.717 H -76.9 -27.1 127.0 0.706 0.011 A:P28161:0.011
1hnc 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 GLN A:139 A:139 146.0 0.811 H -51.5 -46.7 143.0 0.794 0.017 B:P28161:0.017
GLN B:139 B:139 120.0 0.667 H -57.8 -38.4 120.0 0.667 0.0
GLN C:139 C:139 178.0 0.989 H -62.6 -27.8 NA NA NA
GLN D:139 D:139 146.0 0.811 H -58.1 -39.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03013-f1 1 Q03013 100.0 3e-166 GLN A:140 A:140 124.0 0.689 H -65.2 -41.7
af-p09488-f1 1 P09488 86.7 3e-145 GLU A:140 A:140 120.0 0.632 H -64.9 -41.7
af-p28161-f1 1 P28161 83.03 6e-140 GLN A:140 A:140 123.0 0.683 H -64.0 -40.5
af-p46439-f1 1 P46439 83.03 1e-134 GLU A:140 A:140 119.0 0.626 H -65.7 -41.7