Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110203853 . G A CCDS807.1:NM_000850.4:c.634Gtg>Atg_NP_000841.1:p.212V>M Homo sapiens glutathione S-transferase mu 4 (GSTM4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4gtu 1 Q03013 100.0 5e-165 X-RAY
 2000-01-14 VAL A:211 A:211 66.0 0.426 T -138.1 -16.0 66.0 0.426 0.0
VAL B:211 B:211 64.0 0.413 T -84.7 17.5 64.0 0.413 0.0
VAL C:211 C:211 72.0 0.465 T -109.9 -21.5 NA NA NA
VAL D:211 D:211 62.0 0.4 T -95.5 12.4 NA NA NA
VAL E:211 E:211 70.0 0.452 T -112.8 -20.8 NA NA NA
VAL F:211 F:211 59.0 0.381 T -68.0 -5.8 NA NA NA
VAL G:211 G:211 69.0 0.445 T -84.6 -5.4 NA NA NA
VAL H:211 H:211 74.0 0.477 T -81.6 -13.1 NA NA NA
1xw6 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 MET A:212 A:211 84.0 0.454 T -78.7 -10.1 84.0 0.454 0.0 GSH
HOH
 6.548
4.019
 CE
C
 O2
O
MET B:212 B:211 81.0 0.438 T -78.3 -9.3 81.0 0.438 0.0 GSH
HOH
 6.518
3.735
 CE
C
 O2
O
MET C:212 C:211 81.0 0.438 T -78.8 -10.2 NA NA NA
MET D:212 D:211 82.0 0.443 T -79.9 -11.4 NA NA NA
1xwk 1 P09488 86.7 6e-145 X-RAY
 2004-12-21 MET A:212 A:211 78.0 0.422 T -68.5 -20.6 78.0 0.422 0.0 GDN
HOH
 5.211
3.124
 CE
CE
 C5'
O
MET B:212 B:211 83.0 0.449 T -69.9 -21.4 NA NA NA
MET C:212 C:211 74.0 0.4 T -68.6 -18.6 74.0 0.4 0.0 GDN
HOH
 5.316
2.716
 CE
CE
 C5'
O
1yj6 1 P09488 86.7 6e-145 X-RAY
 2005-02-01 MET A:212 A:211 78.0 0.422 T -68.8 -15.5 78.0 0.422 0.0 ZN
GSH
HOH
 6.949
6.443
6.000
 CE
CE
CE
 ZN
O2
O
MET B:212 B:211 84.0 0.454 T -69.6 -12.7 84.0 0.454 0.0 ZN
GSH
HOH
 7.242
6.746
5.019
 CE
CE
CE
 ZN
O2
O
MET C:212 C:211 97.0 0.524 T -69.3 -14.6 NA NA NA
2f3m 1 P09488 86.7 6e-145 X-RAY
 2006-04-25 MET A:212 A:211 72.0 0.389 T -56.3 -11.3 72.0 0.389 0.0 GTD
HOH
 4.082
2.413
 CE
CE
 O61
O
MET B:212 B:211 73.0 0.395 T -57.9 -11.6 73.0 0.395 0.0 GTD
HOH
 4.021
7.365
 CE
N
 O61
O
MET C:212 C:211 74.0 0.4 T -57.8 -11.9 NA NA NA
MET D:212 D:211 74.0 0.4 T -57.9 -11.0 NA NA NA
MET E:212 E:211 74.0 0.4 T -55.4 -9.9 NA NA NA
MET F:212 F:211 71.0 0.384 T -56.4 -11.8 NA NA NA
7beu 1 P09488 86.7 6e-145 X-RAY
 2022-01-12 MET A:212 A:211 82.0 0.443 T -71.5 -10.5 82.0 0.443 0.0 HOH
 2.813
 O
 O
MET B:212 B:211 70.0 0.378 T -77.4 -13.0 NA NA NA
MET C:212 C:211 81.0 0.438 T -75.1 -7.6 NA NA NA
MET D:212 D:211 62.0 0.335 T -72.3 -6.4 62.0 0.335 0.0 HOH
 3.387
 O
 O
1gtu 1 P09488 87.04 3e-144 X-RAY
 1999-02-02 MET A:211 A:211 85.0 0.459 T -86.9 21.8 85.0 0.459 0.0 HOH
 8.323
 CG
 O
MET B:211 B:211 86.0 0.465 T -97.4 22.1 86.0 0.465 0.0 HOH
 4.528
 CG
 O
MET C:211 C:211 80.0 0.432 T -87.1 31.4 NA NA NA
MET D:211 D:211 85.0 0.459 T -92.2 23.3 NA NA NA
2c4j 1 P28161 82.57 5e-139 X-RAY
 2005-10-26 MET A:212 A:212 72.0 0.389 T -72.0 -20.1 72.0 0.389 0.0 GSO
HOH
 4.458
2.775
 SD
O
 CM2
O
MET B:212 B:212 86.0 0.465 T -81.8 -10.2 86.0 0.465 0.0 GSO
HOH
 6.484
2.645
 SD
O
 CL2
O
MET C:212 C:212 98.0 0.53 T -77.3 -12.6 NA NA NA
MET D:212 D:212 86.0 0.465 T -76.0 -15.8 NA NA NA
1xw5 1 P28161 83.33 6e-139 X-RAY
 2004-11-30 MET A:211 A:211 78.0 0.422 T -75.2 -16.3 78.0 0.422 0.0 GSH
HOH
 7.241
2.787
 CE
O
 O2
O
MET B:211 B:211 68.0 0.368 T -81.2 -6.5 68.0 0.368 0.0 GSH
HOH
 6.844
2.924
 CE
CE
 O2
O
1ykc 1 P28161 83.33 6e-139 X-RAY
 2005-01-25 MET A:211 A:211 74.0 0.4 T -81.8 -7.7 74.0 0.4 0.0 GDS
HOH
 7.318
2.998
 SD
O
 OE2
O
MET B:211 B:211 73.0 0.395 T -73.5 -10.2 73.0 0.395 0.0 GDS
HOH
 6.344
3.286
 SD
CE
 OE2
O
2ab6 1 P28161 83.33 6e-139 X-RAY
 2005-08-02 MET A:211 A:211 82.0 0.443 T -74.5 -13.1 82.0 0.443 0.0 GSM
HOH
 8.610
6.558
 CB
N
 C4
O
MET B:211 B:211 82.0 0.443 T -74.4 -9.1 82.0 0.443 0.0 GSM
HOH
 8.748
3.071
 SD
SD
 C4
O
MET C:211 C:211 82.0 0.443 T -78.4 -11.6 NA NA NA
MET D:211 D:211 83.0 0.449 T -77.8 -10.2 NA NA NA
2gtu 1 P28161 83.33 6e-139 X-RAY
 1999-03-02 MET A:211 A:211 91.0 0.492 T -78.6 -9.7 91.0 0.492 0.0 HOH
 8.739
 SD
 O
MET B:211 B:211 94.0 0.508 T -83.1 -6.3 94.0 0.508 0.0 HOH
 5.850
 N
 O
3gtu 1 P28161 83.33 6e-139 X-RAY
 1999-07-29 MET A:211 A:211 85.0 0.459 T -90.6 13.5 85.0 0.459 0.0 HOH
 7.859
 CG
 O
MET C:211 C:211 81.0 0.438 T -88.5 7.9 NA NA NA
3gur 1 P28161 83.33 6e-139 X-RAY
 2009-10-27 MET A:211 A:211 76.0 0.411 T -72.3 -15.2 76.0 0.411 0.0 BYG
HOH
 4.447
5.421
 SD
N
 CE4
O
MET B:211 B:211 60.0 0.324 T -76.4 -23.4 60.0 0.324 0.0 GSH
HOH
 7.813
9.985
 SD
CB
 O2
O
MET C:211 C:211 85.0 0.459 T -71.7 -20.3 NA NA NA
MET D:211 D:211 76.0 0.411 T -74.7 -18.0 NA NA NA
5hwl 1 P28161 83.33 6e-139 X-RAY
 2017-11-08 MET A:211 A:211 71.0 0.384 T -70.4 -11.4 71.0 0.384 0.0 GSH
NNE
HOH
 7.106
8.214
3.065
 CE
CB
CE
 O2
OBL
O
MET B:211 B:211 92.0 0.497 T -67.6 -13.7 92.0 0.497 0.0 GSH
NNE
HOH
 6.968
8.266
3.254
 CE
CB
CE
 O2
OAA
O
1hna 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 MET A:211 A:211 67.0 0.362 T -59.0 -34.7 67.0 0.362 0.0 GDN
HOH
 7.817
3.875
 SD
SD
 O2
O
1hnb 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 MET A:211 A:211 74.0 0.4 S 78.3 150.6 74.0 0.4 0.0 GDN
 8.335
 CE
 CB2
MET B:211 B:211 68.0 0.368 T -65.0 -43.8 68.0 0.368 0.0 GDN
 7.623
 CE
 O2
1hnc 1 P28161 82.87 9e-138 X-RAY
 1994-01-31 MET A:211 A:211 73.0 0.395 S -148.0 -34.1 73.0 0.395 0.0 GDN
 3.641
 CE
 SG2
MET B:211 B:211 45.0 0.243 H -67.9 -49.6 45.0 0.243 0.0 GDN
 5.426
 CG
 SG2
MET C:211 C:211 50.0 0.27 T -51.2 -16.3 NA NA NA
MET D:211 D:211 44.0 0.238 B -139.6 146.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03013-f1 1 Q03013 100.0 3e-166 VAL A:212 A:212 57.0 0.368 T -75.9 -21.3
af-p09488-f1 1 P09488 86.7 3e-145 MET A:212 A:212 79.0 0.427 T -79.2 -13.1
af-p28161-f1 1 P28161 83.03 6e-140 MET A:212 A:212 81.0 0.438 T -83.2 -9.4
af-p46439-f1 1 P46439 83.03 1e-134 SER A:212 A:212 44.0 0.383 T -87.4 -0.8