Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110211104 . A C CCDS808.1:NM_000848.3:c.94Aag>Cag_NP_000839.1:p.32K>Q Homo sapiens glutathione S-transferase mu 2 (GSTM2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2c4j 1 P28161 99.54 3e-164 X-RAY
 2005-10-26 LYS A:32 A:32 112.0 0.56 E -102.7 124.1 112.0 0.56 0.0 HOH
 2.724
 NZ
 O
LYS B:32 B:32 70.0 0.35 E -99.6 125.0 70.0 0.35 0.0 HOH
 2.731
 NZ
 O
LYS C:32 C:32 93.0 0.465 E -105.8 125.5 NA NA NA
LYS D:32 D:32 76.0 0.38 E -105.3 99.8 NA NA NA
1xw5 1 P28161 100.0 7e-164 X-RAY
 2004-11-30 LYS A:31 A:31 88.0 0.44 E -92.6 136.4 88.0 0.44 0.0 HOH
 2.779
 N
 O
LYS B:31 B:31 81.0 0.405 E -94.4 130.9 81.0 0.405 0.0 HOH
 2.649
 O
 O
1ykc 1 P28161 100.0 7e-164 X-RAY
 2005-01-25 LYS A:31 A:31 83.0 0.415 E -101.2 119.0 83.0 0.415 0.0 HOH
 3.311
 CE
 O
LYS B:31 B:31 84.0 0.42 E -95.3 119.3 84.0 0.42 0.0 HOH
 2.784
 NZ
 O
2ab6 1 P28161 100.0 7e-164 X-RAY
 2005-08-02 LYS A:31 A:31 71.0 0.355 E -97.6 116.6 71.0 0.355 0.0 HOH
 2.618
 NZ
 O
LYS B:31 B:31 69.0 0.345 E -95.1 117.4 69.0 0.345 0.0 HOH
 2.565
 O
 O
LYS C:31 C:31 70.0 0.35 E -100.1 117.8 NA NA NA
LYS D:31 D:31 72.0 0.36 E -99.1 113.7 NA NA NA
2gtu 1 P28161 100.0 7e-164 X-RAY
 1999-03-02 LYS A:31 A:31 61.0 0.305 E -96.0 133.6 61.0 0.305 0.0 HOH
 3.678
 CG
 O
LYS B:31 B:31 62.0 0.31 E -101.5 126.5 62.0 0.31 0.0 HOH
 3.505
 CG
 O
3gtu 1 P28161 100.0 7e-164 X-RAY
 1999-07-29 LYS A:31 A:31 73.0 0.365 E -89.1 137.2 73.0 0.365 0.0
LYS C:31 C:31 74.0 0.37 E -81.6 137.6 NA NA NA
3gur 1 P28161 100.0 7e-164 X-RAY
 2009-10-27 LYS A:31 A:31 79.0 0.395 E -99.3 128.4 79.0 0.395 0.0 HOH
 4.485
 CG
 O
LYS B:31 B:31 72.0 0.36 E -102.0 128.7 72.0 0.36 0.0 HOH
 2.688
 N
 O
LYS C:31 C:31 68.0 0.34 E -100.8 148.1 NA NA NA
LYS D:31 D:31 83.0 0.415 E -105.2 106.8 NA NA NA
5hwl 1 P28161 100.0 7e-164 X-RAY
 2017-11-08 LYS A:31 A:31 51.0 NA E -103.5 112.6 51.0 NA NA HOH
 3.056
 N
 O
LYS B:31 B:31 49.0 NA E -117.6 105.7 49.0 NA NA HOH
 4.509
 O
 O
1hna 1 P28161 99.54 1e-162 X-RAY
 1994-01-31 LYS A:31 A:31 55.0 0.275 E -101.9 140.1 55.0 0.275 0.0 HOH
 2.928
 O
 O
1hnb 1 P28161 99.54 1e-162 X-RAY
 1994-01-31 LYS A:31 A:31 86.0 0.43 E -93.9 127.2 86.0 0.43 0.0
LYS B:31 B:31 76.0 0.38 -58.4 133.0 76.0 0.38 0.0
1hnc 1 P28161 99.54 1e-162 X-RAY
 1994-01-31 LYS A:31 A:31 54.0 0.27 -90.5 133.5 54.0 0.27 0.0 GDN
 9.869
 CD
 O2
LYS B:31 B:31 47.0 0.235 E -84.9 113.0 47.0 0.235 0.0 GDN
 9.626
 NZ
 O2
LYS C:31 C:31 62.0 0.31 E -88.8 128.1 NA NA NA
LYS D:31 D:31 69.0 0.345 E -98.4 110.2 NA NA NA
1xw6 1 P09488 84.4 8e-141 X-RAY
 2004-12-21 LYS A:32 A:31 69.0 0.345 E -94.6 132.6 69.0 0.345 0.0 HOH
 2.624
 NZ
 O
LYS B:32 B:31 68.0 0.34 E -95.1 134.9 68.0 0.34 0.0 HOH
 2.961
 N
 O
LYS C:32 C:31 69.0 0.345 E -93.0 133.5 NA NA NA
LYS D:32 D:31 71.0 0.355 E -93.8 134.9 NA NA NA
1xwk 1 P09488 84.4 8e-141 X-RAY
 2004-12-21 LYS A:32 A:31 65.0 0.325 E -82.3 132.7 65.0 0.325 0.0 HOH
 2.813
 N
 O
LYS B:32 B:31 65.0 0.325 E -78.3 135.1 NA NA NA
LYS C:32 C:31 63.0 0.315 E -80.9 129.0 63.0 0.315 0.0 HOH
 3.275
 O
 O
1yj6 1 P09488 84.4 8e-141 X-RAY
 2005-02-01 LYS A:32 A:31 71.0 0.355 E -75.8 131.4 71.0 0.355 0.0 HOH
 6.006
 CE
 O
LYS B:32 B:31 68.0 0.34 E -75.2 130.2 68.0 0.34 0.0 HOH
 6.796
 NZ
 O
LYS C:32 C:31 66.0 0.33 E -73.5 134.5 NA NA NA
2f3m 1 P09488 84.4 8e-141 X-RAY
 2006-04-25 LYS A:32 A:31 64.0 0.32 E -87.4 138.8 64.0 0.32 0.0 HOH
 8.596
 O
 O
LYS B:32 B:31 79.0 0.395 E -89.0 137.7 79.0 0.395 0.0 HOH
 7.029
 NZ
 O
LYS C:32 C:31 80.0 0.4 E -87.7 139.9 NA NA NA
LYS D:32 D:31 78.0 0.39 E -88.3 139.9 NA NA NA
LYS E:32 E:31 64.0 0.32 E -87.2 138.9 NA NA NA
LYS F:32 F:31 81.0 0.405 E -89.4 137.0 NA NA NA
7beu 1 P09488 84.4 8e-141 X-RAY
 2022-01-12 LYS A:32 A:31 70.0 0.35 E -100.8 126.1 70.0 0.35 0.0 HOH
 2.715
 NZ
 O
LYS B:32 B:31 64.0 0.32 E -101.0 123.3 NA NA NA
LYS C:32 C:31 110.0 0.55 E -100.9 122.8 NA NA NA
LYS D:32 D:31 67.0 0.335 E -105.5 129.5 67.0 0.335 0.0 HOH
 2.594
 NZ
 O
2dc5 1 30354091 83.41 1e-140 X-RAY
 2006-06-28 ARG A:39 A:39 62.0 0.276 E -123.4 87.9 62.0 0.276 0.0 HOH
 2.975
 N
 O
ARG B:39 B:39 81.0 0.36 E -116.8 93.3 81.0 0.36 0.0 HOH
 2.854
 O
 O
1gtu 1 P09488 84.33 6e-140 X-RAY
 1999-02-02 LYS A:31 A:31 82.0 0.41 E -91.6 137.0 82.0 0.41 0.0 HOH
 7.672
 NZ
 O
LYS B:31 B:31 78.0 0.39 E -100.2 132.3 78.0 0.39 0.0 HOH
 6.267
 NZ
 O
LYS C:31 C:31 75.0 0.375 E -84.6 140.5 NA NA NA
LYS D:31 D:31 82.0 0.41 E -93.1 134.7 NA NA NA
4gtu 1 Q03013 83.33 7e-139 X-RAY
 2000-01-14 LYS A:31 A:31 125.0 0.625 E -93.2 131.7 125.0 0.625 0.0
LYS B:31 B:31 92.0 0.46 E -114.1 133.6 92.0 0.46 0.0
LYS C:31 C:31 104.0 0.52 E -105.6 121.3 NA NA NA
LYS D:31 D:31 92.0 0.46 E -109.4 161.5 NA NA NA
LYS E:31 E:31 85.0 0.425 E -96.7 125.2 NA NA NA
LYS F:31 F:31 75.0 0.375 E -83.0 122.2 NA NA NA
LYS G:31 G:31 95.0 0.475 E -95.5 119.5 NA NA NA
LYS H:31 H:31 78.0 0.39 E -111.8 144.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28161-f1 1 P28161 100.0 3e-165 LYS A:32 A:32 69.0 0.345 E -91.8 112.7
af-p09488-f1 1 P09488 84.4 3e-141 LYS A:32 A:32 70.0 0.35 E -90.6 116.1
af-q03013-f1 1 Q03013 83.03 6e-140 LYS A:32 A:32 77.0 0.385 E -88.0 117.6
af-p46439-f1 1 P46439 81.19 6e-134 LYS A:32 A:32 69.0 0.345 E -91.7 122.2