Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 110214190 | . | C | A | CCDS808.1:NM_000848.3:c.552ttC>ttA_NP_000839.1:p.184F>L | Homo sapiens glutathione S-transferase mu 2 (GSTM2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2c4j | 1 | P28161 | 99.54 | 3e-164 |
X-RAY |
2005-10-26 | PHE | A:184 | A:184 | 0.0 | 0.0 | H | -62.1 | -46.8 | 0.0 | 0.0 | 0.0 |
HOH |
3.591 |
N |
O |
||
PHE | B:184 | B:184 | 0.0 | 0.0 | H | -64.1 | -47.4 | 0.0 | 0.0 | 0.0 |
HOH |
3.688 |
N |
O |
|||||||||
PHE | C:184 | C:184 | 0.0 | 0.0 | H | -57.6 | -45.8 | NA | NA | NA | |||||||||||||
PHE | D:184 | D:184 | 0.0 | 0.0 | H | -59.9 | -48.2 | NA | NA | NA | |||||||||||||
1xw5 | 1 | P28161 | 100.0 | 7e-164 |
X-RAY |
2004-11-30 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -61.8 | -50.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.752 |
N |
O |
||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -63.6 | -50.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.708 |
N |
O |
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1ykc | 1 | P28161 | 100.0 | 7e-164 |
X-RAY |
2005-01-25 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -54.0 | -53.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.762 |
N |
O |
||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -59.7 | -48.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.847 |
N |
O |
|||||||||
2ab6 | 1 | P28161 | 100.0 | 7e-164 |
X-RAY |
2005-08-02 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -52.5 | -53.7 | 0.0 | 0.0 | 0.0 |
HOH |
6.486 |
N |
O |
||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -56.5 | -52.4 | 0.0 | 0.0 | 0.0 |
HOH |
6.005 |
CB |
O |
|||||||||
PHE | C:183 | C:183 | 0.0 | 0.0 | H | -57.7 | -54.0 | NA | NA | NA | |||||||||||||
PHE | D:183 | D:183 | 0.0 | 0.0 | H | -53.8 | -55.2 | NA | NA | NA | |||||||||||||
2gtu | 1 | P28161 | 100.0 | 7e-164 |
X-RAY |
1999-03-02 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -56.1 | -50.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.672 |
N |
O |
||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -58.2 | -49.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.702 |
N |
O |
|||||||||
3gtu | 1 | P28161 | 100.0 | 7e-164 |
X-RAY |
1999-07-29 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -58.0 | -57.5 | 0.0 | 0.0 | 0.0 | ||||||
PHE | C:183 | C:183 | 0.0 | 0.0 | H | -55.9 | -56.6 | NA | NA | NA | |||||||||||||
3gur | 1 | P28161 | 100.0 | 7e-164 |
X-RAY |
2009-10-27 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -57.3 | -49.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.147 |
N |
O |
||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -61.8 | -39.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.789 |
N |
O |
|||||||||
PHE | C:183 | C:183 | 0.0 | 0.0 | H | -63.4 | -42.0 | NA | NA | NA | |||||||||||||
PHE | D:183 | D:183 | 0.0 | 0.0 | H | -61.2 | -50.0 | NA | NA | NA | |||||||||||||
5hwl | 1 | P28161 | 100.0 | 7e-164 |
X-RAY |
2017-11-08 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -61.4 | -50.4 | 0.0 | 0.0 | 0.0 |
HOH |
3.744 |
N |
O |
||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -59.4 | -50.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.564 |
N |
O |
|||||||||
1hna | 1 | P28161 | 99.54 | 1e-162 |
X-RAY |
1994-01-31 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -62.1 | -47.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.672 |
N |
O |
||
1hnb | 1 | P28161 | 99.54 | 1e-162 |
X-RAY |
1994-01-31 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -55.9 | -45.7 | 0.0 | 0.0 | 0.0 | ||||||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -65.0 | -54.9 | 0.0 | 0.0 | 0.0 | |||||||||||||
1hnc | 1 | P28161 | 99.54 | 1e-162 |
X-RAY |
1994-01-31 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -59.9 | -47.4 | 0.0 | 0.0 | 0.0 | ||||||
PHE | B:183 | B:183 | 1.0 | 0.005 | H | -52.0 | -50.1 | 1.0 | 0.005 | 0.0 | |||||||||||||
PHE | C:183 | C:183 | 0.0 | 0.0 | H | -63.0 | -40.2 | NA | NA | NA | |||||||||||||
PHE | D:183 | D:183 | 0.0 | 0.0 | H | -59.1 | -49.7 | NA | NA | NA | |||||||||||||
1xw6 | 1 | P09488 | 84.4 | 8e-141 |
X-RAY |
2004-12-21 | PHE | A:184 | A:183 | 0.0 | 0.0 | H | -63.5 | -45.5 | 0.0 | 0.0 | 0.0 |
HOH |
4.035 |
N |
O |
||
PHE | B:184 | B:183 | 0.0 | 0.0 | H | -64.9 | -45.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.657 |
N |
O |
|||||||||
PHE | C:184 | C:183 | 0.0 | 0.0 | H | -63.5 | -44.0 | NA | NA | NA | |||||||||||||
PHE | D:184 | D:183 | 0.0 | 0.0 | H | -63.5 | -45.7 | NA | NA | NA | |||||||||||||
1xwk | 1 | P09488 | 84.4 | 8e-141 |
X-RAY |
2004-12-21 | PHE | A:184 | A:183 | 0.0 | 0.0 | H | -59.0 | -45.2 | 0.0 | 0.0 | 0.0 |
HOH |
7.627 |
N |
O |
||
PHE | B:184 | B:183 | 0.0 | 0.0 | H | -62.9 | -53.4 | NA | NA | NA | |||||||||||||
PHE | C:184 | C:183 | 0.0 | 0.0 | H | -62.8 | -42.1 | 0.0 | 0.0 | 0.0 |
HOH |
9.270 |
N |
O |
|||||||||
1yj6 | 1 | P09488 | 84.4 | 8e-141 |
X-RAY |
2005-02-01 | PHE | A:184 | A:183 | 0.0 | 0.0 | H | -61.5 | -49.9 | 0.0 | 0.0 | 0.0 |
HOH |
5.510 |
N |
O |
||
PHE | B:184 | B:183 | 0.0 | 0.0 | H | -64.6 | -48.9 | 0.0 | 0.0 | 0.0 |
HOH |
6.086 |
N |
O |
|||||||||
PHE | C:184 | C:183 | 0.0 | 0.0 | H | -63.3 | -55.0 | NA | NA | NA | |||||||||||||
2f3m | 1 | P09488 | 84.4 | 8e-141 |
X-RAY |
2006-04-25 | PHE | A:184 | A:183 | 0.0 | 0.0 | H | -66.7 | -47.4 | 0.0 | 0.0 | 0.0 | ||||||
PHE | B:184 | B:183 | 0.0 | 0.0 | H | -65.8 | -47.8 | 0.0 | 0.0 | 0.0 |
HOH |
7.180 |
CE1 |
O |
|||||||||
PHE | C:184 | C:183 | 0.0 | 0.0 | H | -61.7 | -50.6 | NA | NA | NA | |||||||||||||
PHE | D:184 | D:183 | 0.0 | 0.0 | H | -62.5 | -48.6 | NA | NA | NA | |||||||||||||
PHE | E:184 | E:183 | 0.0 | 0.0 | H | -65.8 | -46.1 | NA | NA | NA | |||||||||||||
PHE | F:184 | F:183 | 0.0 | 0.0 | H | -65.2 | -46.9 | NA | NA | NA | |||||||||||||
7beu | 1 | P09488 | 84.4 | 8e-141 |
X-RAY |
2022-01-12 | PHE | A:184 | A:183 | 0.0 | 0.0 | H | -63.8 | -46.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.462 |
N |
O |
||
PHE | B:184 | B:183 | 0.0 | 0.0 | H | -66.3 | -43.6 | NA | NA | NA | |||||||||||||
PHE | C:184 | C:183 | 0.0 | 0.0 | H | -60.2 | -45.7 | NA | NA | NA | |||||||||||||
PHE | D:184 | D:183 | 0.0 | 0.0 | H | -60.6 | -46.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.520 |
N |
O |
|||||||||
2dc5 | 1 | 30354091 | 83.41 | 1e-140 |
X-RAY |
2006-06-28 | PHE | A:191 | A:191 | 0.0 | 0.0 | H | -62.5 | -46.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.680 |
N |
O |
||
PHE | B:191 | B:191 | 0.0 | 0.0 | H | -61.8 | -45.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.640 |
N |
O |
|||||||||
1gtu | 1 | P09488 | 84.33 | 6e-140 |
X-RAY |
1999-02-02 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -53.9 | -54.9 | 0.0 | 0.0 | 0.0 | ||||||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -51.7 | -50.1 | 0.0 | 0.0 | 0.0 | |||||||||||||
PHE | C:183 | C:183 | 0.0 | 0.0 | H | -58.5 | -53.8 | NA | NA | NA | |||||||||||||
PHE | D:183 | D:183 | 0.0 | 0.0 | H | -46.8 | -51.2 | NA | NA | NA | |||||||||||||
4gtu | 1 | Q03013 | 83.33 | 7e-139 |
X-RAY |
2000-01-14 | PHE | A:183 | A:183 | 0.0 | 0.0 | H | -53.9 | -48.9 | 0.0 | 0.0 | 0.0 | ||||||
PHE | B:183 | B:183 | 0.0 | 0.0 | H | -54.4 | -51.2 | 0.0 | 0.0 | 0.0 | |||||||||||||
PHE | C:183 | C:183 | 0.0 | 0.0 | H | -61.2 | -47.3 | NA | NA | NA | |||||||||||||
PHE | D:183 | D:183 | 0.0 | 0.0 | H | -62.8 | -41.4 | NA | NA | NA | |||||||||||||
PHE | E:183 | E:183 | 0.0 | 0.0 | H | -62.3 | -44.9 | NA | NA | NA | |||||||||||||
PHE | F:183 | F:183 | 0.0 | 0.0 | H | -58.4 | -59.1 | NA | NA | NA | |||||||||||||
PHE | G:183 | G:183 | 0.0 | 0.0 | H | -62.3 | -38.6 | NA | NA | NA | |||||||||||||
PHE | H:183 | H:183 | 0.0 | 0.0 | H | -59.7 | -33.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p28161-f1 | 1 | P28161 | 100.0 | 3e-165 | PHE | A:184 | A:184 | 0.0 | 0.0 | H | -62.4 | -48.5 | |
af-p09488-f1 | 1 | P09488 | 84.4 | 3e-141 | PHE | A:184 | A:184 | 2.0 | 0.01 | H | -59.6 | -50.5 | |
af-q03013-f1 | 1 | Q03013 | 83.03 | 6e-140 | PHE | A:184 | A:184 | 1.0 | 0.005 | H | -59.7 | -50.8 | |
af-p46439-f1 | 1 | P46439 | 81.19 | 6e-134 | PHE | A:184 | A:184 | 2.0 | 0.01 | H | -59.1 | -49.7 |