Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110217439 . C A CCDS808.1:NM_000848.3:c.638gCt>gAt_NP_000839.1:p.213A>D Homo sapiens glutathione S-transferase mu 2 (GSTM2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2c4j 1 P28161 99.54 3e-164 X-RAY
 2005-10-26 ALA A:213 A:213 3.0 0.026 -70.3 145.2 3.0 0.026 0.0 GSO
HOH
 7.617
4.853
 N
CA
 CM2
O
ALA B:213 B:213 7.0 0.061 -69.2 150.7 7.0 0.061 0.0 GSO
HOH
 8.089
4.357
 N
O
 CL2
O
ALA C:213 C:213 4.0 0.035 -69.5 151.0 NA NA NA
ALA D:213 D:213 3.0 0.026 -73.7 156.8 NA NA NA
1xw5 1 P28161 100.0 7e-164 X-RAY
 2004-11-30 ALA A:212 A:212 6.0 0.052 -68.3 153.3 6.0 0.052 0.0 HOH
 2.955
 O
 O
ALA B:212 B:212 4.0 0.035 -74.1 150.3 4.0 0.035 0.0 HOH
 2.631
 O
 O
1ykc 1 P28161 100.0 7e-164 X-RAY
 2005-01-25 ALA A:212 A:212 7.0 0.061 -81.7 156.3 7.0 0.061 0.0 GDS
HOH
 6.886
4.458
 CB
O
 O2
O
ALA B:212 B:212 7.0 0.061 -80.5 156.3 7.0 0.061 0.0 GDS
HOH
 6.910
6.592
 CB
N
 O2
O
2ab6 1 P28161 100.0 7e-164 X-RAY
 2005-08-02 ALA A:212 A:212 8.0 0.07 -67.7 148.5 8.0 0.07 0.0 GSM
HOH
 9.039
7.520
 CB
O
 C4
O
ALA B:212 B:212 7.0 0.061 -72.8 146.8 7.0 0.061 0.0 GSM
HOH
 9.057
5.133
 CB
O
 C4
O
ALA C:212 C:212 8.0 0.07 -69.0 148.0 NA NA NA
ALA D:212 D:212 8.0 0.07 -68.3 146.9 NA NA NA
2gtu 1 P28161 100.0 7e-164 X-RAY
 1999-03-02 ALA A:212 A:212 4.0 0.035 -74.6 142.7 4.0 0.035 0.0 HOH
 9.797
 CB
 O
ALA B:212 B:212 4.0 0.035 -75.5 149.8 4.0 0.035 0.0 HOH
 7.703
 N
 O
3gtu 1 P28161 100.0 7e-164 X-RAY
 1999-07-29 ALA A:212 A:212 3.0 0.026 -89.3 147.5 3.0 0.026 0.0 HOH
 6.798
 CB
 O
ALA C:212 C:212 5.0 0.043 -82.9 157.1 NA NA NA
3gur 1 P28161 100.0 7e-164 X-RAY
 2009-10-27 ALA A:212 A:212 6.0 0.052 -82.2 146.3 6.0 0.052 0.0 BYG
HOH
 7.543
6.583
 N
CB
 CE6
O
ALA B:212 B:212 1.0 0.009 -79.2 140.6 1.0 0.009 0.0 HOH
 8.500
 CB
 O
ALA C:212 C:212 3.0 0.026 -73.3 140.7 NA NA NA
ALA D:212 D:212 5.0 0.043 -75.4 143.0 NA NA NA
5hwl 1 P28161 100.0 7e-164 X-RAY
 2017-11-08 ALA A:212 A:212 3.0 0.026 -72.2 149.8 3.0 0.026 0.0 NNE
HOH
 7.459
4.543
 CB
O
 CBK
O
ALA B:212 B:212 4.0 0.035 -73.2 153.3 4.0 0.035 0.0 NNE
HOH
 7.435
6.021
 CB
N
 CAL
O
1hna 1 P28161 99.54 1e-162 X-RAY
 1994-01-31 ALA A:212 A:212 0.0 0.0 S -121.9 107.5 0.0 0.0 0.0 GDN
HOH
 9.445
7.017
 CB
CB
 SG2
O
1hnb 1 P28161 99.54 1e-162 X-RAY
 1994-01-31 ALA A:212 A:212 16.0 0.139 T 52.1 125.1 16.0 0.139 0.0
ALA B:212 B:212 2.0 0.017 S -74.2 127.9 2.0 0.017 0.0
1hnc 1 P28161 99.54 1e-162 X-RAY
 1994-01-31 ALA A:212 A:212 27.0 0.235 S -166.5 -53.7 27.0 0.235 0.0 GDN
 9.859
 N
 SG2
ALA B:212 B:212 26.0 0.226 T -85.2 17.1 26.0 0.226 0.0 GDN
 8.980
 N
 SG2
ALA C:212 C:212 6.0 0.052 T -165.8 55.0 NA NA NA
ALA D:212 D:212 27.0 0.235 T -52.7 -45.4 NA NA NA
1xw6 1 P09488 84.4 8e-141 X-RAY
 2004-12-21 ALA A:213 A:212 6.0 0.052 -73.5 153.4 6.0 0.052 0.0 HOH
 2.805
 O
 O
ALA B:213 B:212 7.0 0.061 -74.5 153.5 7.0 0.061 0.0 HOH
 2.624
 O
 O
ALA C:213 C:212 7.0 0.061 -74.1 154.3 NA NA NA
ALA D:213 D:212 7.0 0.061 -72.6 152.8 NA NA NA
1xwk 1 P09488 84.4 8e-141 X-RAY
 2004-12-21 ALA A:213 A:212 6.0 0.052 -63.9 149.8 6.0 0.052 0.0 GDN
HOH
 7.348
6.799
 CB
O
 O4B
O
ALA B:213 B:212 7.0 0.061 -63.5 148.8 NA NA NA
ALA C:213 C:212 7.0 0.061 -65.0 152.0 7.0 0.061 0.0 GDN
HOH
 7.351
5.433
 CB
O
 O4B
O
1yj6 1 P09488 84.4 8e-141 X-RAY
 2005-02-01 ALA A:213 A:212 8.0 0.07 -69.9 153.7 8.0 0.07 0.0 ZN
HOH
 8.647
7.112
 CB
O
 ZN
O
ALA B:213 B:212 9.0 0.078 -72.6 154.1 9.0 0.078 0.0 ZN
HOH
 8.918
7.657
 CB
CB
 ZN
O
ALA C:213 C:212 10.0 0.087 -71.9 152.8 NA NA NA
2f3m 1 P09488 84.4 8e-141 X-RAY
 2006-04-25 ALA A:213 A:212 8.0 0.07 -76.9 157.8 8.0 0.07 0.0 GTD
HOH
 7.768
7.849
 CB
N
 O21
O
ALA B:213 B:212 7.0 0.061 -78.4 157.7 7.0 0.061 0.0 GTD
HOH
 7.579
9.267
 CB
N
 O21
O
ALA C:213 C:212 9.0 0.078 -76.4 157.1 NA NA NA
ALA D:213 D:212 8.0 0.07 -77.1 156.3 NA NA NA
ALA E:213 E:212 8.0 0.07 -79.2 157.0 NA NA NA
ALA F:213 F:212 8.0 0.07 -78.5 157.4 NA NA NA
7beu 1 P09488 84.4 8e-141 X-RAY
 2022-01-12 ALA A:213 A:212 6.0 0.052 -74.3 153.7 6.0 0.052 0.0 HOH
 2.686
 O
 O
ALA B:213 B:212 4.0 0.035 -72.0 150.4 NA NA NA
ALA C:213 C:212 5.0 0.043 -75.5 152.2 NA NA NA
ALA D:213 D:212 5.0 0.043 -83.9 143.9 5.0 0.043 0.0 HOH
 3.250
 O
 O
2dc5 1 30354091 83.41 1e-140 X-RAY
 2006-06-28 ALA A:220 A:220 7.0 0.061 -78.7 152.5 7.0 0.061 0.0 HOH
 3.700
 C
 O
ALA B:220 B:220 8.0 0.07 -76.3 148.1 8.0 0.07 0.0 HOH
 2.821
 O
 O
1gtu 1 P09488 84.33 6e-140 X-RAY
 1999-02-02 ALA A:212 A:212 6.0 0.052 -104.3 148.0 6.0 0.052 0.0 HOH
 7.773
 CB
 O
ALA B:212 B:212 7.0 0.061 -101.9 151.9 7.0 0.061 0.0 HOH
 7.069
 N
 O
ALA C:212 C:212 8.0 0.07 -114.5 153.5 NA NA NA
ALA D:212 D:212 6.0 0.052 -100.4 150.4 NA NA NA
4gtu 1 Q03013 83.33 7e-139 X-RAY
 2000-01-14 ALA A:212 A:212 0.0 0.0 -60.8 135.1 0.0 0.0 0.0
ALA B:212 B:212 5.0 0.043 -103.6 135.8 5.0 0.043 0.0
ALA C:212 C:212 1.0 0.009 S -67.2 140.3 NA NA NA
ALA D:212 D:212 4.0 0.035 -99.6 140.2 NA NA NA
ALA E:212 E:212 2.0 0.017 S -76.7 133.9 NA NA NA
ALA F:212 F:212 2.0 0.017 -69.4 131.0 NA NA NA
ALA G:212 G:212 8.0 0.07 -76.5 151.3 NA NA NA
ALA H:212 H:212 0.0 0.0 -75.1 132.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28161-f1 1 P28161 100.0 3e-165 ALA A:213 A:213 5.0 0.043 -73.2 149.7
af-p09488-f1 1 P09488 84.4 3e-141 ALA A:213 A:213 4.0 0.035 -71.0 150.1
af-q03013-f1 1 Q03013 83.03 6e-140 ALA A:213 A:213 2.0 0.017 -64.4 146.0
af-p46439-f1 1 P46439 81.19 6e-134 ALA A:213 A:213 7.0 0.061 -73.9 146.5