Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110230529 . G A CCDS809.1:NM_000561.3:c.34Ggg>Agg_NP_000552.2:p.12G>R Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 GLY A:12 A:11 6.0 0.08 G 42.6 -138.3 6.0 0.08 0.0 GSH
HOH
 6.413
2.858
 CA
O
 SG2
O
GLY B:12 B:11 6.0 0.08 G 42.4 -137.4 6.0 0.08 0.0 GSH
HOH
 6.329
2.729
 CA
O
 SG2
O
GLY C:12 C:11 6.0 0.08 G 41.8 -138.1 NA NA NA
GLY D:12 D:11 6.0 0.08 G 44.8 -138.0 NA NA NA
1xwk 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 GLY A:12 A:11 3.0 0.04 T 51.7 -130.6 3.0 0.04 0.0 GDN
HOH
 5.159
2.661
 CA
O
 O2B
O
GLY B:12 B:11 3.0 0.04 G 40.2 -131.4 NA NA NA
GLY C:12 C:11 2.0 0.027 T 52.0 -130.0 2.0 0.027 0.0 GDN
HOH
 5.130
3.622
 C
O
 O2B
O
1yj6 1 P09488 100.0 3e-164 X-RAY
 2005-02-01 GLY A:12 A:11 4.0 0.053 T 51.2 -131.5 4.0 0.053 0.0 ZN
GSH
HOH
 5.678
6.093
3.731
 CA
CA
O
 ZN
SG2
O
GLY B:12 B:11 5.0 0.067 T 49.6 -130.2 5.0 0.067 0.0 ZN
GSH
HOH
 5.583
5.902
2.435
 CA
CA
O
 ZN
SG2
O
GLY C:12 C:11 5.0 0.067 T 44.3 -130.7 NA NA NA
2f3m 1 P09488 100.0 3e-164 X-RAY
 2006-04-25 GLY A:12 A:11 5.0 0.067 G 46.9 -128.5 5.0 0.067 0.0 GTD
HOH
 3.689
6.660
 CA
O
 O22
O
GLY B:12 B:11 4.0 0.053 G 40.1 -132.2 4.0 0.053 0.0 GTD
HOH
 3.774
5.757
 CA
N
 O22
O
GLY C:12 C:11 4.0 0.053 G 41.7 -130.1 NA NA NA
GLY D:12 D:11 4.0 0.053 G 42.6 -129.1 NA NA NA
GLY E:12 E:11 4.0 0.053 G 46.5 -130.2 NA NA NA
GLY F:12 F:11 4.0 0.053 G 40.3 -130.9 NA NA NA
7beu 1 P09488 100.0 3e-164 X-RAY
 2022-01-12 GLY A:12 A:11 3.0 0.04 G 54.0 -145.3 3.0 0.04 0.0 HOH
 2.770
 O
 O
GLY B:12 B:11 4.0 0.053 G 47.2 -143.1 NA NA NA
GLY C:12 C:11 4.0 0.053 G 54.4 -139.9 NA NA NA
GLY D:12 D:11 4.0 0.053 G 52.9 -142.6 4.0 0.053 0.0 HOH
 2.637
 O
 O
1gtu 1 P09488 100.0 2e-163 X-RAY
 1999-02-02 GLY A:11 A:11 7.0 0.093 G 36.0 -138.9 7.0 0.093 0.0 HOH
 2.761
 O
 O
GLY B:11 B:11 6.0 0.08 G 40.2 -134.9 6.0 0.08 0.0 HOH
 2.670
 O
 O
GLY C:11 C:11 6.0 0.08 G 40.3 -143.3 NA NA NA
GLY D:11 D:11 7.0 0.093 G 37.4 -137.4 NA NA NA
4gtu 1 Q03013 87.04 3e-144 X-RAY
 2000-01-14 GLY A:11 A:11 19.0 0.253 T 41.8 -141.1 19.0 0.253 0.0
GLY B:11 B:11 21.0 0.28 G 49.5 -146.9 21.0 0.28 0.0
GLY C:11 C:11 18.0 0.24 T 37.1 -136.1 NA NA NA
GLY D:11 D:11 14.0 0.187 T 39.1 -137.9 NA NA NA
GLY E:11 E:11 15.0 0.2 G 46.2 -161.5 NA NA NA
GLY F:11 F:11 16.0 0.213 G 38.5 -149.3 NA NA NA
GLY G:11 G:11 19.0 0.253 G 48.8 -148.3 NA NA NA
GLY H:11 H:11 14.0 0.187 T 40.3 -143.4 NA NA NA
2c4j 1 P28161 84.86 3e-141 X-RAY
 2005-10-26 GLY A:12 A:12 6.0 0.08 G 43.1 -137.6 6.0 0.08 0.0 GSO
HOH
 4.499
3.259
 CA
O
 OF2
O
GLY B:12 B:12 5.0 0.067 G 44.9 -137.3 5.0 0.067 0.0 GSO
HOH
 4.532
3.248
 CA
O
 OF2
O
GLY C:12 C:12 4.0 0.053 G 43.6 -134.3 NA NA NA
GLY D:12 D:12 4.0 0.053 G 42.1 -136.8 NA NA NA
1xw5 1 P28161 84.33 6e-140 X-RAY
 2004-11-30 GLY A:11 A:11 5.0 0.067 G 32.9 -135.9 5.0 0.067 0.0 GSH
HOH
 6.193
3.256
 CA
O
 SG2
O
GLY B:11 B:11 4.0 0.053 G 38.6 -136.0 4.0 0.053 0.0 GSH
HOH
 6.166
3.270
 CA
O
 SG2
O
1ykc 1 P28161 84.33 6e-140 X-RAY
 2005-01-25 GLY A:11 A:11 5.0 0.067 T 39.0 -120.8 5.0 0.067 0.0 GDS
HOH
 3.359
3.119
 C
O
 OE3
O
GLY B:11 B:11 6.0 0.08 T 41.5 -123.3 6.0 0.08 0.0 GDS
HOH
 3.279
3.112
 O
O
 OE3
O
2ab6 1 P28161 84.33 6e-140 X-RAY
 2005-08-02 GLY A:11 A:11 4.0 0.053 T 39.9 -125.6 4.0 0.053 0.0 GSM
HOH
 6.117
3.439
 CA
C
 SG2
O
GLY B:11 B:11 5.0 0.067 T 38.7 -127.5 5.0 0.067 0.0 GSM
HOH
 6.092
4.163
 CA
C
 SG2
O
GLY C:11 C:11 6.0 0.08 T 45.5 -129.6 NA NA NA
GLY D:11 D:11 5.0 0.067 G 48.9 -133.0 NA NA NA
2gtu 1 P28161 84.33 6e-140 X-RAY
 1999-03-02 GLY A:11 A:11 5.0 0.067 G 33.3 -134.0 5.0 0.067 0.0 HOH
 3.127
 O
 O
GLY B:11 B:11 6.0 0.08 G 31.6 -133.2 6.0 0.08 0.0 HOH
 3.553
 CA
 O
3gtu 1 P28161 84.33 6e-140 X-RAY
 1999-07-29 GLY A:11 A:11 4.0 0.053 G 26.4 -140.6 4.0 0.053 0.0 HOH
 3.581
 CA
 O
GLY C:11 C:11 4.0 0.053 G 28.7 -137.3 NA NA NA
3gur 1 P28161 84.33 6e-140 X-RAY
 2009-10-27 GLY A:11 A:11 4.0 0.053 G 51.8 -143.7 4.0 0.053 0.0 BYG
HOH
 3.389
3.671
 C
O
 OA3
O
GLY B:11 B:11 2.0 0.027 G 47.9 -130.0 2.0 0.027 0.0 GSH
HOH
 6.072
3.428
 CA
O
 SG2
O
GLY C:11 C:11 3.0 0.04 G 40.3 -135.0 NA NA NA
GLY D:11 D:11 3.0 0.04 G 41.0 -136.4 NA NA NA
5hwl 1 P28161 84.33 6e-140 X-RAY
 2017-11-08 GLY A:11 A:11 4.0 0.053 G 37.6 -138.4 4.0 0.053 0.0 GSH
NNE
HOH
 5.975
3.633
3.241
 CA
CA
O
 SG2
CBN
O
GLY B:11 B:11 5.0 0.067 G 41.9 -136.3 5.0 0.067 0.0 GSH
NNE
HOH
 5.983
3.608
3.221
 CA
CA
O
 SG2
CAN
O
1hna 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 GLY A:11 A:11 5.0 0.067 G 35.3 -135.6 5.0 0.067 0.0 GDN
HOH
 6.183
2.802
 CA
O
 SG2
O
1hnb 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 GLY A:11 A:11 25.0 0.333 S 60.9 -160.3 25.0 0.333 0.0 GDN
 5.510
 CA
 SG2
GLY B:11 B:11 3.0 0.04 T 59.6 -144.5 3.0 0.04 0.0 GDN
 6.509
 CA
 SG2
1hnc 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 GLY A:11 A:11 10.0 0.133 T 45.0 -144.7 10.0 0.133 0.0 GDN
 6.737
 CA
 SG2
GLY B:11 B:11 20.0 0.267 T 49.0 -158.7 20.0 0.267 0.0 GDN
 5.469
 CA
 CB2
GLY C:11 C:11 0.0 0.0 G 35.0 -138.3 NA NA NA
GLY D:11 D:11 14.0 0.187 T 38.1 -130.4 NA NA NA
2dc5 1 30354091 81.57 6e-137 X-RAY
 2006-06-28 GLY A:19 A:19 5.0 0.067 G 38.2 -127.8 5.0 0.067 0.0 HOH
 2.222
 O
 O
GLY B:19 B:19 7.0 0.093 T 39.8 -123.8 7.0 0.093 0.0 HOH
 2.464
 O
 O
1b4p 1 P08010 80.65 6e-136 X-RAY
 2003-07-08 GLY A:11 A:11 14.0 0.187 T 47.5 -124.2 14.0 0.187 0.0 GPS
HOH
 3.439
2.485
 CA
O
 CZ4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09488-f1 1 P09488 100.0 1e-164 GLY A:12 A:12 5.0 0.067 G 40.0 -144.1
af-q03013-f1 1 Q03013 86.7 3e-145 GLY A:12 A:12 14.0 0.187 G 39.6 -147.7
af-p46439-f1 1 P46439 87.61 6e-142 GLY A:12 A:12 5.0 0.067 G 39.0 -143.6
af-p28161-f1 1 P28161 84.4 3e-141 GLY A:12 A:12 5.0 0.067 G 43.9 -137.3